RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 WDFY1Q8IWB7 410 aa9.91□□□□□ -0.82
HDAC6-201ENST00000334136 TMEM183AQ8IXX5 376 aa9.91□□□□□ -0.82
HDAC6-201ENST00000334136 REV3LO60673 3130 aa9.91□□□□□ -0.82
HDAC6-201ENST00000334136 SIAH2O43255 324 aa9.9□□□□□ -0.82
HDAC6-201ENST00000334136 SOD3P08294 240 aa9.9□□□□□ -0.82
HDAC6-201ENST00000334136 FGF12P61328 243 aa9.9□□□□□ -0.82
HDAC6-201ENST00000334136 GNB1P62873 340 aa9.9□□□□□ -0.82
HDAC6-201ENST00000334136 ELOBQ15370 118 aa9.9□□□□□ -0.82
HDAC6-201ENST00000334136 CALHM1Q8IU99 346 aa9.9□□□□□ -0.82
HDAC6-201ENST00000334136 BLNKQ8WV28 456 aa9.9□□□□□ -0.82
HDAC6-201ENST00000334136 NEU4Q8WWR8 484 aaPredicted RBP9.9□□□□□ -0.82
HDAC6-201ENST00000334136 PERPQ96FX8 193 aa9.9□□□□□ -0.82
HDAC6-201ENST00000334136 CCL13Q99616 98 aa9.9□□□□□ -0.82
HDAC6-201ENST00000334136 PNRC2Q9NPJ4 139 aaKnown RBP9.9□□□□□ -0.82
HDAC6-201ENST00000334136 DEFA4P12838 97 aa9.9□□□□□ -0.82
HDAC6-201ENST00000334136 MARS2Q96GW9 593 aaKnown RBP9.9□□□□□ -0.82
HDAC6-201ENST00000334136 LPAR2Q9HBW0 351 aa9.9□□□□□ -0.82
HDAC6-201ENST00000334136 ZNF462Q96JM2 2506 aa9.9□□□□□ -0.82
HDAC6-201ENST00000334136 M0R2Z0 102 aa9.9□□□□□ -0.82
HDAC6-201ENST00000334136 COTL1Q14019 142 aa9.9□□□□□ -0.82
HDAC6-201ENST00000334136 EYSQ5T1H1 3165 aa9.9□□□□□ -0.83
HDAC6-201ENST00000334136 NCOA6Q14686 2063 aaPredicted RBP9.89□□□□□ -0.83
HDAC6-201ENST00000334136 TRBV6-7A0A0A0MS04 114 aa9.89□□□□□ -0.83
HDAC6-201ENST00000334136 PDE6DO43924 150 aa9.89□□□□□ -0.83
HDAC6-201ENST00000334136 STUMQ69YW2 141 aa9.89□□□□□ -0.83
HDAC6-201ENST00000334136 TECRQ9NZ01 308 aaKnown RBP9.89□□□□□ -0.83
HDAC6-201ENST00000334136 OR6C3Q9NZP0 311 aa9.89□□□□□ -0.83
HDAC6-201ENST00000334136 HELTA6NFD8 242 aa9.89□□□□□ -0.83
HDAC6-201ENST00000334136 CD1BP29016 333 aa9.89□□□□□ -0.83
HDAC6-201ENST00000334136 HINT1P49773 126 aaPredicted RBP9.89□□□□□ -0.83
HDAC6-201ENST00000334136 PDLIM4P50479 330 aa9.89□□□□□ -0.83
HDAC6-201ENST00000334136 TAS2R60P59551 318 aa9.89□□□□□ -0.83
HDAC6-201ENST00000334136 ADORA2A-AS1P86434 159 aa9.89□□□□□ -0.83
HDAC6-201ENST00000334136 RTL8BQ17RB0 113 aa9.89□□□□□ -0.83
HDAC6-201ENST00000334136 COL5A1-AS1Q5SY13 56 aa9.89□□□□□ -0.83
HDAC6-201ENST00000334136 ATOH7Q8N100 152 aa9.89□□□□□ -0.83
HDAC6-201ENST00000334136 OR10X1Q8NGY0 326 aa9.89□□□□□ -0.83
HDAC6-201ENST00000334136 SLC45A2Q9UMX9 530 aa9.89□□□□□ -0.83
HDAC6-201ENST00000334136 CCDC168Q8NDH2 2452 aa9.89□□□□□ -0.83
HDAC6-201ENST00000334136 SRSF10O75494 262 aaKnown RBP9.89□□□□□ -0.83
HDAC6-201ENST00000334136 CGAP01215 116 aa9.89□□□□□ -0.83
HDAC6-201ENST00000334136 ERVFRD-1P60508 538 aa9.89□□□□□ -0.83
HDAC6-201ENST00000334136 OR8I2Q8N0Y5 310 aa9.89□□□□□ -0.83
HDAC6-201ENST00000334136 OR52L2PQ8NGH6 319 aa9.89□□□□□ -0.83
HDAC6-201ENST00000334136 LDLRAD4O15165 306 aa9.89□□□□□ -0.83
HDAC6-201ENST00000334136 KBTBD11O94819 623 aa9.89□□□□□ -0.83
HDAC6-201ENST00000334136 USF1P22415 310 aaPredicted RBP9.89□□□□□ -0.83
HDAC6-201ENST00000334136 GRNP28799 593 aaKnown RBP9.89□□□□□ -0.83
HDAC6-201ENST00000334136 UBE2L3P68036 154 aaKnown RBP9.89□□□□□ -0.83
HDAC6-201ENST00000334136 ICAM4Q14773 271 aa9.89□□□□□ -0.83
HDAC6-201ENST00000334136 OR4X1Q8NH49 305 aa9.89□□□□□ -0.83
HDAC6-201ENST00000334136 LYZL4Q96KX0 146 aa9.89□□□□□ -0.83
HDAC6-201ENST00000334136 BMPR1BO00238 502 aa9.88□□□□□ -0.83
HDAC6-201ENST00000334136 CBLN1P23435 193 aa9.88□□□□□ -0.83
HDAC6-201ENST00000334136 OTX1P32242 354 aaPredicted RBP9.88□□□□□ -0.83
HDAC6-201ENST00000334136 CEBPDP49716 269 aaPredicted RBP9.88□□□□□ -0.83
HDAC6-201ENST00000334136 HERPUD1Q15011 391 aa9.88□□□□□ -0.83
HDAC6-201ENST00000334136 CLDND2Q8NHS1 167 aa9.88□□□□□ -0.83
HDAC6-201ENST00000334136 P2RX4Q99571 388 aa9.88□□□□□ -0.83
HDAC6-201ENST00000334136 TMEM106BQ9NUM4 274 aa9.88□□□□□ -0.83
HDAC6-201ENST00000334136 HIF1ANQ9NWT6 349 aa9.88□□□□□ -0.83
HDAC6-201ENST00000334136 C5orf63A6NC05 138 aa9.88□□□□□ -0.83
HDAC6-201ENST00000334136 K7N7A8 449 aa9.88□□□□□ -0.83
HDAC6-201ENST00000334136 CNIH1O95406 144 aa9.88□□□□□ -0.83
HDAC6-201ENST00000334136 SUB1P53999 127 aaKnown RBP eCLIP9.88□□□□□ -0.837e-9■■■□□ 16.5
HDAC6-201ENST00000334136 GAL3ST2Q9H3Q3 398 aa9.88□□□□□ -0.83
HDAC6-201ENST00000334136 IL36RNQ9UBH0 155 aa9.88□□□□□ -0.83
HDAC6-201ENST00000334136 VCANP13611 3396 aa9.88□□□□□ -0.83
HDAC6-201ENST00000334136 OPRK1P41145 380 aa9.88□□□□□ -0.83
HDAC6-201ENST00000334136 HGFACQ04756 655 aa9.88□□□□□ -0.83
HDAC6-201ENST00000334136 LBHQ53QV2 105 aaPredicted RBP9.88□□□□□ -0.83
HDAC6-201ENST00000334136 OR2D3Q8NGH3 330 aa9.88□□□□□ -0.83
HDAC6-201ENST00000334136 NEUROG1Q92886 237 aa9.88□□□□□ -0.83
HDAC6-201ENST00000334136 PIMREGQ9BSJ6 248 aa9.88□□□□□ -0.83
HDAC6-201ENST00000334136 SLC25A10Q9UBX3 287 aaPredicted RBP9.88□□□□□ -0.83
HDAC6-201ENST00000334136 LRRK2Q5S007 2527 aa9.87□□□□□ -0.83
HDAC6-201ENST00000334136 MFAP2P55001 183 aa9.87□□□□□ -0.83
HDAC6-201ENST00000334136 HES1Q14469 280 aa9.87□□□□□ -0.83
HDAC6-201ENST00000334136 MST1LQ2TV78 715 aa9.87□□□□□ -0.83
HDAC6-201ENST00000334136 MIC13Q5XKP0 118 aa9.87□□□□□ -0.83
HDAC6-201ENST00000334136 C5orf24Q7Z6I8 188 aa9.87□□□□□ -0.83
HDAC6-201ENST00000334136 ZNF843Q8N446 348 aa9.87□□□□□ -0.83
HDAC6-201ENST00000334136 IMMP2LQ96T52 175 aa9.87□□□□□ -0.83
HDAC6-201ENST00000334136 PLAUP00749 431 aa9.87□□□□□ -0.83
HDAC6-201ENST00000334136 SLC25A5P05141 298 aaKnown RBP9.87□□□□□ -0.83
HDAC6-201ENST00000334136 ORM2P19652 201 aa9.87□□□□□ -0.83
HDAC6-201ENST00000334136 GPX4P36969 197 aaPredicted RBP9.87□□□□□ -0.83
HDAC6-201ENST00000334136 TCTAP57738 103 aa9.87□□□□□ -0.83
HDAC6-201ENST00000334136 RPL31P62899 125 aaKnown RBP9.87□□□□□ -0.83
HDAC6-201ENST00000334136 FXYD3Q14802 87 aa9.87□□□□□ -0.83
HDAC6-201ENST00000334136 ZNF124Q15973 351 aa9.87□□□□□ -0.83
HDAC6-201ENST00000334136 WDR73Q6P4I2 378 aa9.87□□□□□ -0.83
HDAC6-201ENST00000334136 HIST1H2BLQ99880 126 aa9.87□□□□□ -0.83
HDAC6-201ENST00000334136 TM2D1Q9BX74 207 aa9.87□□□□□ -0.83
HDAC6-201ENST00000334136 CA11O75493 328 aa9.87□□□□□ -0.83
HDAC6-201ENST00000334136 CT45A10P0DMU9 189 aa9.87□□□□□ -0.83
HDAC6-201ENST00000334136 BRS3P32247 399 aa9.87□□□□□ -0.83
HDAC6-201ENST00000334136 UCP3P55916 312 aa9.87□□□□□ -0.83
HDAC6-201ENST00000334136 CTAG1AP78358 180 aa9.87□□□□□ -0.83
HDAC6-201ENST00000334136 HES4Q9HCC6 221 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 889 ms