RNA–Protein interactions for RNA: ENST00000333617.8

LSAMP-201, Transcript of limbic system associated membrane protein, humanhuman

TSL 2

Gene LSAMP, Length 1,561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-201ENST00000333617 HEYLQ9NQ87 328 aaPredicted RBP7.11□□□□□ -1.27
LSAMP-201ENST00000333617 RPRMQ9NS64 109 aa7.11□□□□□ -1.27
LSAMP-201ENST00000333617 KIAA1456Q9P272 454 aa7.11□□□□□ -1.27
LSAMP-201ENST00000333617 FLNCQ14315 2725 aa7.1□□□□□ -1.27
LSAMP-201ENST00000333617 TRAV1-1A0A0B4J248 108 aa7.1□□□□□ -1.27
LSAMP-201ENST00000333617 FAM74A7A6NL05 159 aa7.1□□□□□ -1.27
LSAMP-201ENST00000333617 LYNX1G3V0Z9 82 aa7.1□□□□□ -1.27
LSAMP-201ENST00000333617 FSTL3O95633 263 aa7.1□□□□□ -1.27
LSAMP-201ENST00000333617 IFNA10P01566 189 aa7.1□□□□□ -1.27
LSAMP-201ENST00000333617 APOA2P02652 100 aa7.1□□□□□ -1.27
LSAMP-201ENST00000333617 LYNX1P0DP58 116 aa7.1□□□□□ -1.27
LSAMP-201ENST00000333617 FGF7P21781 194 aa7.1□□□□□ -1.27
LSAMP-201ENST00000333617 COL8A2P25067 703 aa7.1□□□□□ -1.27
LSAMP-201ENST00000333617 VDAC2P45880 294 aaPredicted RBP7.1□□□□□ -1.27
LSAMP-201ENST00000333617 NPBWR1P48145 328 aa7.1□□□□□ -1.27
LSAMP-201ENST00000333617 HOXA1P49639 335 aaPredicted RBP7.1□□□□□ -1.27
LSAMP-201ENST00000333617 ELLP55199 621 aaPredicted RBP7.1□□□□□ -1.27
LSAMP-201ENST00000333617 DLX6P56179 175 aa7.1□□□□□ -1.27
LSAMP-201ENST00000333617 TAGLNQ01995 201 aaKnown RBP7.1□□□□□ -1.27
LSAMP-201ENST00000333617 VWC2Q2TAL6 325 aa7.1□□□□□ -1.27
LSAMP-201ENST00000333617 FAM74A3Q4VXF1 159 aa7.1□□□□□ -1.27
LSAMP-201ENST00000333617 TMEM155Q4W5P6 130 aa7.1□□□□□ -1.27
LSAMP-201ENST00000333617 SP5Q6BEB4 398 aaPredicted RBP7.1□□□□□ -1.27
LSAMP-201ENST00000333617 FAM71F2Q6NXP2 309 aa7.1□□□□□ -1.27
LSAMP-201ENST00000333617 CENPVQ7Z7K6 275 aaPredicted RBP7.1□□□□□ -1.27
LSAMP-201ENST00000333617 LINC00311Q8N616 119 aa7.1□□□□□ -1.27
LSAMP-201ENST00000333617 OR13D1Q8NGV5 346 aa7.1□□□□□ -1.27
LSAMP-201ENST00000333617 OR10X1Q8NGY0 326 aa7.1□□□□□ -1.27
LSAMP-201ENST00000333617 RAB1BQ9H0U4 201 aa7.1□□□□□ -1.27
LSAMP-201ENST00000333617 SLC35B3Q9H1N7 401 aa7.1□□□□□ -1.27
LSAMP-201ENST00000333617 VSIRQ9H7M9 311 aa7.1□□□□□ -1.27
LSAMP-201ENST00000333617 ENY2Q9NPA8 101 aa7.1□□□□□ -1.27
LSAMP-201ENST00000333617 TMEM14BQ9NUH8 114 aa7.1□□□□□ -1.27
LSAMP-201ENST00000333617 RALYQ9UKM9 306 aaKnown RBP7.1□□□□□ -1.27
LSAMP-201ENST00000333617 TCF19Q9Y242 345 aa7.1□□□□□ -1.27
LSAMP-201ENST00000333617 FOXA2Q9Y261 457 aaPredicted RBP7.1□□□□□ -1.27
LSAMP-201ENST00000333617 SPTAN1Q13813 2472 aaKnown RBP7.09□□□□□ -1.27
LSAMP-201ENST00000333617 J3QR06 171 aa7.09□□□□□ -1.27
LSAMP-201ENST00000333617 IGHV2-70P01814 119 aa7.09□□□□□ -1.27
LSAMP-201ENST00000333617 MBP02144 154 aa7.09□□□□□ -1.27
LSAMP-201ENST00000333617 IGHV1-8P0DP01 117 aa7.09□□□□□ -1.27
LSAMP-201ENST00000333617 HSPE1P61604 102 aaKnown RBP7.09□□□□□ -1.27
LSAMP-201ENST00000333617 RAB11AP62491 216 aa7.09□□□□□ -1.27
LSAMP-201ENST00000333617 HAGHQ16775 308 aa7.09□□□□□ -1.27
LSAMP-201ENST00000333617 ETV3LQ6ZN32 361 aa7.09□□□□□ -1.27
LSAMP-201ENST00000333617 ZNF709Q8N972 641 aa7.09□□□□□ -1.27
LSAMP-201ENST00000333617 CLRN3Q8NCR9 226 aa7.09□□□□□ -1.27
LSAMP-201ENST00000333617 OSR1Q8TAX0 266 aaPredicted RBP7.09□□□□□ -1.27
LSAMP-201ENST00000333617 ZNF596Q8TC21 504 aa7.09□□□□□ -1.27
LSAMP-201ENST00000333617 MBD3L1Q8WWY6 194 aa7.09□□□□□ -1.27
LSAMP-201ENST00000333617 RARRES2Q99969 163 aa7.09□□□□□ -1.27
LSAMP-201ENST00000333617 MRPL20Q9BYC9 149 aaKnown RBP7.09□□□□□ -1.27
LSAMP-201ENST00000333617 PRNDQ9UKY0 176 aa7.09□□□□□ -1.27
LSAMP-201ENST00000333617 OR51B2Q9Y5P1 312 aa7.09□□□□□ -1.27
LSAMP-201ENST00000333617 ASH1LQ9NR48 2969 aaKnown RBP7.08□□□□□ -1.28
LSAMP-201ENST00000333617 A0A087X0M5 115 aa7.08□□□□□ -1.28
LSAMP-201ENST00000333617 A0A1B0GX30 115 aa7.08□□□□□ -1.28
LSAMP-201ENST00000333617 C17orf112F2Z3M2 114 aa7.08□□□□□ -1.28
LSAMP-201ENST00000333617 H7C2Y5 167 aa7.08□□□□□ -1.28
LSAMP-201ENST00000333617 UPK2O00526 184 aa7.08□□□□□ -1.28
LSAMP-201ENST00000333617 IGKV1-16P04430 117 aa7.08□□□□□ -1.28
LSAMP-201ENST00000333617 IL6RP08887 468 aaPredicted RBP7.08□□□□□ -1.28
LSAMP-201ENST00000333617 REG1BP48304 166 aa7.08□□□□□ -1.28
LSAMP-201ENST00000333617 HNF4GQ14541 408 aa7.08□□□□□ -1.28
LSAMP-201ENST00000333617 ZNF726P1Q15940 193 aa7.08□□□□□ -1.28
LSAMP-201ENST00000333617 ZNF506Q5JVG8 444 aa7.08□□□□□ -1.28
LSAMP-201ENST00000333617 TMEM88Q6PEY1 159 aa7.08□□□□□ -1.28
LSAMP-201ENST00000333617 LCN15Q6UWW0 184 aa7.08□□□□□ -1.28
LSAMP-201ENST00000333617 OR5AN1Q8NGI8 311 aa7.08□□□□□ -1.28
LSAMP-201ENST00000333617 OR9G1Q8NH87 305 aa7.08□□□□□ -1.28
LSAMP-201ENST00000333617 CLDND2Q8NHS1 167 aa7.08□□□□□ -1.28
LSAMP-201ENST00000333617 TMEM186Q96B77 213 aa7.08□□□□□ -1.28
LSAMP-201ENST00000333617 RCC1LQ96I51 464 aaKnown RBP7.08□□□□□ -1.28
LSAMP-201ENST00000333617 GGACTQ9BVM4 153 aa7.08□□□□□ -1.28
LSAMP-201ENST00000333617 CBLN4Q9NTU7 201 aa7.08□□□□□ -1.28
LSAMP-201ENST00000333617 C19orf73Q9NVV2 129 aa7.08□□□□□ -1.28
LSAMP-201ENST00000333617 FKBP11Q9NYL4 201 aa7.08□□□□□ -1.28
LSAMP-201ENST00000333617 ZNF257Q9Y2Q1 563 aa7.08□□□□□ -1.28
LSAMP-201ENST00000333617 A0A1W2PPH5 198 aa7.08□□□□□ -1.28
LSAMP-201ENST00000333617 SMCO3A2RU48 225 aa7.08□□□□□ -1.28
LSAMP-201ENST00000333617 SRRM4A7MD48 611 aaKnown RBP7.08□□□□□ -1.28
LSAMP-201ENST00000333617 H0YJW9 148 aa7.08□□□□□ -1.28
LSAMP-201ENST00000333617 RRHO14718 337 aa7.08□□□□□ -1.28
LSAMP-201ENST00000333617 KBTBD11O94819 623 aa7.08□□□□□ -1.28
LSAMP-201ENST00000333617 HSPB1P04792 205 aaKnown RBP7.08□□□□□ -1.28
LSAMP-201ENST00000333617 IFNA4P05014 189 aa7.08□□□□□ -1.28
LSAMP-201ENST00000333617 OR13C7P0DN81 318 aa7.08□□□□□ -1.28
LSAMP-201ENST00000333617 MDKP21741 143 aaPredicted RBP7.08□□□□□ -1.28
LSAMP-201ENST00000333617 NPY1RP25929 384 aa7.08□□□□□ -1.28
LSAMP-201ENST00000333617 IL3RAP26951 378 aa7.08□□□□□ -1.28
LSAMP-201ENST00000333617 CD1BP29016 333 aa7.08□□□□□ -1.28
LSAMP-201ENST00000333617 ZNF137PP52743 207 aa7.08□□□□□ -1.28
LSAMP-201ENST00000333617 FGF8P55075 233 aaPredicted RBP7.08□□□□□ -1.28
LSAMP-201ENST00000333617 ICAM4Q14773 271 aa7.08□□□□□ -1.28
LSAMP-201ENST00000333617 TMEM177Q53S58 311 aa7.08□□□□□ -1.28
LSAMP-201ENST00000333617 KHDC3LQ587J8 217 aa7.08□□□□□ -1.28
LSAMP-201ENST00000333617 SOHLH1Q5JUK2 328 aa7.08□□□□□ -1.28
LSAMP-201ENST00000333617 FFAR4Q5NUL3 377 aa7.08□□□□□ -1.28
LSAMP-201ENST00000333617 AVPI1Q5T686 147 aa7.08□□□□□ -1.28
LSAMP-201ENST00000333617 C11orf71Q6IPW1 123 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms