RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 OR2B11Q5JQS5 317 aa13.24□□□□□ -0.29
PDLIM1-201ENST00000329399 ZNF429Q86V71 674 aa13.24□□□□□ -0.29
PDLIM1-201ENST00000329399 BAP18Q8IXM2 172 aa13.24□□□□□ -0.29
PDLIM1-201ENST00000329399 OR11H6Q8NGC7 330 aa13.24□□□□□ -0.29
PDLIM1-201ENST00000329399 OR4A16Q8NH70 328 aa13.24□□□□□ -0.29
PDLIM1-201ENST00000329399 C17orf50Q8WW18 174 aa13.24□□□□□ -0.29
PDLIM1-201ENST00000329399 FKBP11Q9NYL4 201 aa13.24□□□□□ -0.29
PDLIM1-201ENST00000329399 SSSCA1O60232 199 aa13.23□□□□□ -0.29
PDLIM1-201ENST00000329399 PAX6P26367 422 aa13.23□□□□□ -0.29
PDLIM1-201ENST00000329399 CEACAM3P40198 252 aa13.23□□□□□ -0.29
PDLIM1-201ENST00000329399 UBE2KP61086 200 aa13.23□□□□□ -0.29
PDLIM1-201ENST00000329399 RPP30P78346 268 aaKnown RBP13.23□□□□□ -0.29
PDLIM1-201ENST00000329399 SCGB2A2Q13296 93 aa13.23□□□□□ -0.29
PDLIM1-201ENST00000329399 TMEM177Q53S58 311 aa13.23□□□□□ -0.29
PDLIM1-201ENST00000329399 CLLU1Q5K131 121 aa13.23□□□□□ -0.29
PDLIM1-201ENST00000329399 STX12Q86Y82 276 aa13.23□□□□□ -0.29
PDLIM1-201ENST00000329399 TGIF2LXQ8IUE1 241 aa13.23□□□□□ -0.29
PDLIM1-201ENST00000329399 OR4C13Q8NGP0 309 aa13.23□□□□□ -0.29
PDLIM1-201ENST00000329399 OR4A5Q8NH83 315 aa13.23□□□□□ -0.29
PDLIM1-201ENST00000329399 VSTM2AQ8TAG5 236 aa13.23□□□□□ -0.29
PDLIM1-201ENST00000329399 AJUBAQ96IF1 538 aa13.23□□□□□ -0.29
PDLIM1-201ENST00000329399 CLCC1Q96S66 551 aa13.23□□□□□ -0.29
PDLIM1-201ENST00000329399 SLC25A32Q9H2D1 315 aa13.23□□□□□ -0.29
PDLIM1-201ENST00000329399 MSGN1A6NI15 193 aa13.23□□□□□ -0.29
PDLIM1-201ENST00000329399 SPCS3P61009 180 aa13.23□□□□□ -0.29
PDLIM1-201ENST00000329399 ZNF266Q14584 549 aa13.23□□□□□ -0.29
PDLIM1-201ENST00000329399 UBAC2Q8NBM4 344 aa13.23□□□□□ -0.29
PDLIM1-201ENST00000329399 RHOVQ96L33 236 aa13.23□□□□□ -0.29
PDLIM1-201ENST00000329399 RNF5Q99942 180 aa13.23□□□□□ -0.29
PDLIM1-201ENST00000329399 PRDM13Q9H4Q3 707 aa13.23□□□□□ -0.29
PDLIM1-201ENST00000329399 WASHC3Q9Y3C0 194 aa13.23□□□□□ -0.29
PDLIM1-201ENST00000329399 TRRAPQ9Y4A5 3859 aa13.23□□□□□ -0.29
PDLIM1-201ENST00000329399 OOSP1A8MZH6 123 aa13.22□□□□□ -0.29
PDLIM1-201ENST00000329399 H0YJW9 148 aa13.22□□□□□ -0.29
PDLIM1-201ENST00000329399 BUB1B-PAK6H3BSN5 160 aa13.22□□□□□ -0.29
PDLIM1-201ENST00000329399 DFFBO76075 338 aa13.22□□□□□ -0.29
PDLIM1-201ENST00000329399 CRYZL1O95825 349 aa13.22□□□□□ -0.29
PDLIM1-201ENST00000329399 LGALS7P47929 136 aa13.22□□□□□ -0.29
PDLIM1-201ENST00000329399 CAV2P51636 162 aa13.22□□□□□ -0.29
PDLIM1-201ENST00000329399 ATP5IP56385 69 aaPredicted RBP13.22□□□□□ -0.29
PDLIM1-201ENST00000329399 EWSR1Q01844 656 aaKnown RBP eCLIP13.22□□□□□ -0.29
PDLIM1-201ENST00000329399 UTF1Q5T230 341 aa13.22□□□□□ -0.29
PDLIM1-201ENST00000329399 OR8H3Q8N146 312 aa13.22□□□□□ -0.29
PDLIM1-201ENST00000329399 TMEM252Q8N6L7 170 aa13.22□□□□□ -0.29
PDLIM1-201ENST00000329399 FLYWCH2Q96CP2 140 aaKnown RBP13.22□□□□□ -0.29
PDLIM1-201ENST00000329399 NABP2Q9BQ15 211 aa13.22□□□□□ -0.29
PDLIM1-201ENST00000329399 CYTL1Q9NRR1 136 aa13.22□□□□□ -0.29
PDLIM1-201ENST00000329399 TNFRSF19Q9NS68 423 aa13.22□□□□□ -0.29
PDLIM1-201ENST00000329399 BET1LQ9NYM9 111 aa13.22□□□□□ -0.29
PDLIM1-201ENST00000329399 PRNDQ9UKY0 176 aa13.22□□□□□ -0.29
PDLIM1-201ENST00000329399 ZNF257Q9Y2Q1 563 aa13.22□□□□□ -0.29
PDLIM1-201ENST00000329399 HOXA3O43365 443 aaPredicted RBP13.21□□□□□ -0.3
PDLIM1-201ENST00000329399 RBMXL2O75526 392 aaKnown RBP13.21□□□□□ -0.3
PDLIM1-201ENST00000329399 SPDEFO95238 335 aa13.21□□□□□ -0.3
PDLIM1-201ENST00000329399 IL6RP08887 468 aaPredicted RBP13.21□□□□□ -0.3
PDLIM1-201ENST00000329399 SULT1A1P50225 295 aa13.21□□□□□ -0.3
PDLIM1-201ENST00000329399 HBG1P69891 147 aa13.21□□□□□ -0.3
PDLIM1-201ENST00000329399 HBG2P69892 147 aa13.21□□□□□ -0.3
PDLIM1-201ENST00000329399 STPG2Q8N412 459 aa13.21□□□□□ -0.3
PDLIM1-201ENST00000329399 SPATA3Q8NHX4 192 aa13.21□□□□□ -0.3
PDLIM1-201ENST00000329399 MAGT1Q9H0U3 335 aa13.21□□□□□ -0.3
PDLIM1-201ENST00000329399 TMEM140Q9NV12 185 aa13.21□□□□□ -0.3
PDLIM1-201ENST00000329399 PSENENQ9NZ42 101 aa13.21□□□□□ -0.3
PDLIM1-201ENST00000329399 FOXA2Q9Y261 457 aaPredicted RBP13.21□□□□□ -0.3
PDLIM1-201ENST00000329399 LEUTXA8MZ59 168 aa13.2□□□□□ -0.3
PDLIM1-201ENST00000329399 CFDP00746 253 aaPredicted RBP13.2□□□□□ -0.3
PDLIM1-201ENST00000329399 HTR2BP41595 481 aa13.2□□□□□ -0.3
PDLIM1-201ENST00000329399 PAX9P55771 341 aa13.2□□□□□ -0.3
PDLIM1-201ENST00000329399 MINOS1Q5TGZ0 78 aa13.2□□□□□ -0.3
PDLIM1-201ENST00000329399 Q6YL49 198 aa13.2□□□□□ -0.3
PDLIM1-201ENST00000329399 PUSL1Q8N0Z8 303 aaKnown RBP13.2□□□□□ -0.3
PDLIM1-201ENST00000329399 MRPL20Q9BYC9 149 aaKnown RBP13.2□□□□□ -0.3
PDLIM1-201ENST00000329399 ARV1Q9H2C2 271 aa13.2□□□□□ -0.3
PDLIM1-201ENST00000329399 FBXL17Q9UF56 701 aa13.2□□□□□ -0.3
PDLIM1-201ENST00000329399 MINOS1-NBL1R4GNA1 71 aa13.2□□□□□ -0.3
PDLIM1-201ENST00000329399 NPFFO15130 113 aa13.19□□□□□ -0.3
PDLIM1-201ENST00000329399 SHOXO15266 292 aa13.19□□□□□ -0.3
PDLIM1-201ENST00000329399 HTR1DP28221 377 aa13.19□□□□□ -0.3
PDLIM1-201ENST00000329399 BPIFB3P59826 476 aa13.19□□□□□ -0.3
PDLIM1-201ENST00000329399 RELBQ01201 579 aa13.19□□□□□ -0.3
PDLIM1-201ENST00000329399 LDLRAD2Q5SZI1 272 aa13.19□□□□□ -0.3
PDLIM1-201ENST00000329399 CCDC144NLQ6NUI1 221 aa13.19□□□□□ -0.3
PDLIM1-201ENST00000329399 RBMS3Q6XE24 437 aaKnown RBP13.19□□□□□ -0.3
PDLIM1-201ENST00000329399 RPEQ96AT9 228 aa13.19□□□□□ -0.3
PDLIM1-201ENST00000329399 HIPK2Q9H2X6 1198 aa13.19□□□□□ -0.3
PDLIM1-201ENST00000329399 RBKSQ9H477 322 aa13.19□□□□□ -0.3
PDLIM1-201ENST00000329399 DPM3Q9P2X0 92 aa13.19□□□□□ -0.3
PDLIM1-201ENST00000329399 LINC00862A6NCI5 91 aa13.18□□□□□ -0.3
PDLIM1-201ENST00000329399 FAM24AA6NFZ4 105 aa13.18□□□□□ -0.3
PDLIM1-201ENST00000329399 C15orf61A6NNL5 157 aa13.18□□□□□ -0.3
PDLIM1-201ENST00000329399 LY6LH3BQJ8 138 aa13.18□□□□□ -0.3
PDLIM1-201ENST00000329399 H7C2Y5 167 aa13.18□□□□□ -0.3
PDLIM1-201ENST00000329399 TRIM77I1YAP6 450 aa13.18□□□□□ -0.3
PDLIM1-201ENST00000329399 IGHV4-59P01825 116 aa13.18□□□□□ -0.3
PDLIM1-201ENST00000329399 SAA4P35542 130 aa13.18□□□□□ -0.3
PDLIM1-201ENST00000329399 UBE2E1P51965 193 aa13.18□□□□□ -0.3
PDLIM1-201ENST00000329399 LINC00205P59089 165 aa13.18□□□□□ -0.3
PDLIM1-201ENST00000329399 HSPE1P61604 102 aaKnown RBP13.18□□□□□ -0.3
PDLIM1-201ENST00000329399 ATP6V1FQ16864 119 aa13.18□□□□□ -0.3
PDLIM1-201ENST00000329399 OR4A47Q6IF82 309 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms