RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 AMMECR1Q9Y4X0 333 aaPredicted RBP12.1□□□□□ -0.47
TPM3-205ENST00000328159 FAM157AC9JC47 383 aa12.09□□□□□ -0.47
TPM3-205ENST00000328159 C9JQL5 133 aa12.09□□□□□ -0.47
TPM3-205ENST00000328159 PRSS46E5RG02 174 aa12.09□□□□□ -0.47
TPM3-205ENST00000328159 IGLV2-23P01705 113 aa12.09□□□□□ -0.47
TPM3-205ENST00000328159 CCL20P78556 96 aa12.09□□□□□ -0.47
TPM3-205ENST00000328159 PEA15Q15121 130 aa12.09□□□□□ -0.47
TPM3-205ENST00000328159 TMEM41BQ5BJD5 291 aa12.09□□□□□ -0.47
TPM3-205ENST00000328159 SP5Q6BEB4 398 aaPredicted RBP12.09□□□□□ -0.47
TPM3-205ENST00000328159 PNKDQ8N490 385 aa12.09□□□□□ -0.47
TPM3-205ENST00000328159 SLC24A4Q8NFF2 622 aa12.09□□□□□ -0.47
TPM3-205ENST00000328159 OR5B3Q8NH48 314 aa12.09□□□□□ -0.47
TPM3-205ENST00000328159 OR4A5Q8NH83 315 aa12.09□□□□□ -0.47
TPM3-205ENST00000328159 TMEM167AQ8TBQ9 72 aa12.09□□□□□ -0.47
TPM3-205ENST00000328159 SFT2D1Q8WV19 159 aa12.09□□□□□ -0.47
TPM3-205ENST00000328159 PBDC1Q9BVG4 233 aa12.09□□□□□ -0.47
TPM3-205ENST00000328159 GGACTQ9BVM4 153 aa12.09□□□□□ -0.47
TPM3-205ENST00000328159 SEC11CQ9BY50 192 aa12.09□□□□□ -0.47
TPM3-205ENST00000328159 EIF5A2Q9GZV4 153 aaKnown RBP12.09□□□□□ -0.47
TPM3-205ENST00000328159 PLEKHA3Q9HB20 300 aa12.09□□□□□ -0.47
TPM3-205ENST00000328159 ARHGAP32A7KAX9 2087 aa12.08□□□□□ -0.47
TPM3-205ENST00000328159 A0A1B0GW64 132 aa12.08□□□□□ -0.48
TPM3-205ENST00000328159 M0R1W7 72 aa12.08□□□□□ -0.48
TPM3-205ENST00000328159 GOSR1O95249 250 aa12.08□□□□□ -0.48
TPM3-205ENST00000328159 HBE1P02100 147 aa12.08□□□□□ -0.48
TPM3-205ENST00000328159 OPN1MWP04001 364 aa12.08□□□□□ -0.48
TPM3-205ENST00000328159 IFNA4P05014 189 aa12.08□□□□□ -0.48
TPM3-205ENST00000328159 SFTA3P0C7M3 94 aa12.08□□□□□ -0.48
TPM3-205ENST00000328159 OPN1MW2P0DN77 364 aa12.08□□□□□ -0.48
TPM3-205ENST00000328159 OPN1MW3P0DN78 364 aa12.08□□□□□ -0.48
TPM3-205ENST00000328159 USF1P22415 310 aaPredicted RBP12.08□□□□□ -0.48
TPM3-205ENST00000328159 NPY1RP25929 384 aa12.08□□□□□ -0.48
TPM3-205ENST00000328159 CD1BP29016 333 aa12.08□□□□□ -0.48
TPM3-205ENST00000328159 ELLP55199 621 aaPredicted RBP12.08□□□□□ -0.48
TPM3-205ENST00000328159 ARF6P62330 175 aa12.08□□□□□ -0.48
TPM3-205ENST00000328159 RPL8P62917 257 aaKnown RBP12.08□□□□□ -0.48
TPM3-205ENST00000328159 DLK1P80370 383 aa12.08□□□□□ -0.48
TPM3-205ENST00000328159 OR4P4Q8NGL7 312 aa12.08□□□□□ -0.48
TPM3-205ENST00000328159 VSTM2AQ8TAG5 236 aa12.08□□□□□ -0.48
TPM3-205ENST00000328159 WDR83OSQ9Y284 106 aa12.08□□□□□ -0.48
TPM3-205ENST00000328159 TRAV1-1A0A0B4J248 108 aa12.07□□□□□ -0.48
TPM3-205ENST00000328159 OVOL3O00110 214 aa12.07□□□□□ -0.48
TPM3-205ENST00000328159 ENSAO43768 121 aaKnown RBP12.07□□□□□ -0.48
TPM3-205ENST00000328159 CA2P00918 260 aa12.07□□□□□ -0.48
TPM3-205ENST00000328159 PRB1P04280 392 aa12.07□□□□□ -0.48
TPM3-205ENST00000328159 RAB2AP61019 212 aa12.07□□□□□ -0.48
TPM3-205ENST00000328159 HNF4GQ14541 408 aa12.07□□□□□ -0.48
TPM3-205ENST00000328159 VMA21Q3ZAQ7 101 aa12.07□□□□□ -0.48
TPM3-205ENST00000328159 ATRAIDQ6UW56 229 aa12.07□□□□□ -0.48
TPM3-205ENST00000328159 NPCDR1Q9BY65 106 aa12.07□□□□□ -0.48
TPM3-205ENST00000328159 COMMD5Q9GZQ3 224 aa12.07□□□□□ -0.48
TPM3-205ENST00000328159 IGHV3-72A0A0B4J1Y9 119 aa12.07□□□□□ -0.48
TPM3-205ENST00000328159 IGHV1-3A0A0C4DH29 117 aa12.07□□□□□ -0.48
TPM3-205ENST00000328159 C17orf112F2Z3M2 114 aa12.07□□□□□ -0.48
TPM3-205ENST00000328159 LGALS7P47929 136 aa12.07□□□□□ -0.48
TPM3-205ENST00000328159 ZNF726P1Q15940 193 aa12.07□□□□□ -0.48
TPM3-205ENST00000328159 GUCA2BQ16661 112 aa12.07□□□□□ -0.48
TPM3-205ENST00000328159 ACSM6Q6P461 480 aa12.07□□□□□ -0.48
TPM3-205ENST00000328159 MOB3BQ86TA1 216 aa12.07□□□□□ -0.48
TPM3-205ENST00000328159 ZNF709Q8N972 641 aa12.07□□□□□ -0.48
TPM3-205ENST00000328159 MBD3L1Q8WWY6 194 aa12.07□□□□□ -0.48
TPM3-205ENST00000328159 RITA1Q96K30 269 aa12.07□□□□□ -0.48
TPM3-205ENST00000328159 BBC3Q96PG8 261 aaPredicted RBP12.07□□□□□ -0.48
TPM3-205ENST00000328159 SIRT7Q9NRC8 400 aa12.07□□□□□ -0.48
TPM3-205ENST00000328159 KIAA1456Q9P272 454 aa12.07□□□□□ -0.48
TPM3-205ENST00000328159 INSIG2Q9Y5U4 225 aa12.07□□□□□ -0.48
TPM3-205ENST00000328159 SMCO3A2RU48 225 aa12.06□□□□□ -0.48
TPM3-205ENST00000328159 LY6LH3BQJ8 138 aa12.06□□□□□ -0.48
TPM3-205ENST00000328159 SVBPQ8N300 66 aa12.06□□□□□ -0.48
TPM3-205ENST00000328159 OR11H6Q8NGC7 330 aa12.06□□□□□ -0.48
TPM3-205ENST00000328159 OR1L8Q8NGR8 309 aa12.06□□□□□ -0.48
TPM3-205ENST00000328159 RPEQ96AT9 228 aa12.06□□□□□ -0.48
TPM3-205ENST00000328159 RCC1LQ96I51 464 aaKnown RBP12.06□□□□□ -0.48
TPM3-205ENST00000328159 NDUFA4L2Q9NRX3 87 aa12.06□□□□□ -0.48
TPM3-205ENST00000328159 SLC25A17O43808 307 aa12.05□□□□□ -0.48
TPM3-205ENST00000328159 IGHV2-5P01817 119 aa12.05□□□□□ -0.48
TPM3-205ENST00000328159 MBP02144 154 aa12.05□□□□□ -0.48
TPM3-205ENST00000328159 RNF224P0DH78 156 aa12.05□□□□□ -0.48
TPM3-205ENST00000328159 PRTN3P24158 256 aa12.05□□□□□ -0.48
TPM3-205ENST00000328159 PPT1P50897 306 aa12.05□□□□□ -0.48
TPM3-205ENST00000328159 FFAR4Q5NUL3 377 aa12.05□□□□□ -0.48
TPM3-205ENST00000328159 SSX7Q7RTT5 188 aa12.05□□□□□ -0.48
TPM3-205ENST00000328159 DCHS2Q6V1P9 2916 aa12.05□□□□□ -0.48
TPM3-205ENST00000328159 DOPEY1Q5JWR5 2465 aa12.05□□□□□ -0.48
TPM3-205ENST00000328159 RBFOX3A6NFN3 312 aa12.05□□□□□ -0.48
TPM3-205ENST00000328159 MPDU1O75352 247 aa12.05□□□□□ -0.48
TPM3-205ENST00000328159 IGKV1D-33P01593 117 aa12.05□□□□□ -0.48
TPM3-205ENST00000328159 IGKV1-33P01594 117 aa12.05□□□□□ -0.48
TPM3-205ENST00000328159 ATP5IP56385 69 aaPredicted RBP12.05□□□□□ -0.48
TPM3-205ENST00000328159 BTN1A1Q13410 526 aa12.05□□□□□ -0.48
TPM3-205ENST00000328159 LCN15Q6UWW0 184 aa12.05□□□□□ -0.48
TPM3-205ENST00000328159 TREML4Q6UXN2 200 aa12.05□□□□□ -0.48
TPM3-205ENST00000328159 KIR3DL3Q8N743 410 aa12.05□□□□□ -0.48
TPM3-205ENST00000328159 RARRES2Q99969 163 aa12.05□□□□□ -0.48
TPM3-205ENST00000328159 NKX6-2Q9C056 277 aaPredicted RBP12.05□□□□□ -0.48
TPM3-205ENST00000328159 ZNF430Q9H8G1 570 aaPredicted RBP12.05□□□□□ -0.48
TPM3-205ENST00000328159 M6PRP20645 277 aa12.04□□□□□ -0.48
TPM3-205ENST00000328159 ZFP36P26651 326 aaKnown RBP12.04□□□□□ -0.48
TPM3-205ENST00000328159 BSXQ3C1V8 233 aa12.04□□□□□ -0.48
TPM3-205ENST00000328159 C2orf83Q53S99 150 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms