RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 PPP1R14DQ9NXH3 145 aa9.29□□□□□ -0.92
PTPN7-201ENST00000309017 CFAP47Q6ZTR5 3102 aa9.29□□□□□ -0.92
PTPN7-201ENST00000309017 NCKAP5O14513 1909 aa9.29□□□□□ -0.92
PTPN7-201ENST00000309017 ICE1Q9Y2F5 2266 aa9.29□□□□□ -0.92
PTPN7-201ENST00000309017 STAG3L2P0CL84 134 aa9.29□□□□□ -0.92
PTPN7-201ENST00000309017 STAG3L3P0CL85 134 aa9.29□□□□□ -0.92
PTPN7-201ENST00000309017 OPRK1P41145 380 aa9.29□□□□□ -0.92
PTPN7-201ENST00000309017 PSG5Q15238 335 aa9.29□□□□□ -0.92
PTPN7-201ENST00000309017 GGTLC1Q9BX51 225 aa9.29□□□□□ -0.92
PTPN7-201ENST00000309017 WNT10AQ9GZT5 417 aa9.29□□□□□ -0.92
PTPN7-201ENST00000309017 PRR14LQ5THK1 2151 aa9.29□□□□□ -0.92
PTPN7-201ENST00000309017 ZNF146Q15072 292 aa9.29□□□□□ -0.92
PTPN7-201ENST00000309017 C6orf15Q6UXA7 325 aaPredicted RBP9.29□□□□□ -0.92
PTPN7-201ENST00000309017 OR13A1Q8NGR1 328 aa9.29□□□□□ -0.92
PTPN7-201ENST00000309017 GMPPAQ96IJ6 420 aaPredicted RBP9.29□□□□□ -0.92
PTPN7-201ENST00000309017 MGST2Q99735 147 aa9.29□□□□□ -0.92
PTPN7-201ENST00000309017 TTTY12Q9BZ98 90 aa9.29□□□□□ -0.92
PTPN7-201ENST00000309017 GNB4Q9HAV0 340 aa9.29□□□□□ -0.92
PTPN7-201ENST00000309017 FBXL7Q9UJT9 491 aa9.29□□□□□ -0.92
PTPN7-201ENST00000309017 C20orf202A1L168 122 aa9.28□□□□□ -0.92
PTPN7-201ENST00000309017 HELTA6NFD8 242 aa9.28□□□□□ -0.92
PTPN7-201ENST00000309017 TIMM8AO60220 97 aaPredicted RBP9.28□□□□□ -0.92
PTPN7-201ENST00000309017 LYZL6O75951 148 aa9.28□□□□□ -0.92
PTPN7-201ENST00000309017 CGAP01215 116 aa9.28□□□□□ -0.92
PTPN7-201ENST00000309017 HOXC12P31275 282 aa9.28□□□□□ -0.92
PTPN7-201ENST00000309017 PTTG1IPP53801 180 aa9.28□□□□□ -0.92
PTPN7-201ENST00000309017 RELQ04864 619 aaPredicted RBP9.28□□□□□ -0.92
PTPN7-201ENST00000309017 PQLC2Q6ZP29 291 aa9.28□□□□□ -0.92
PTPN7-201ENST00000309017 RAB1CQ92928 201 aa9.28□□□□□ -0.92
PTPN7-201ENST00000309017 SEPSECSQ9HD40 501 aaKnown RBP9.28□□□□□ -0.92
PTPN7-201ENST00000309017 NRN1Q9NPD7 142 aa9.28□□□□□ -0.92
PTPN7-201ENST00000309017 CRYBB3P26998 211 aa9.28□□□□□ -0.92
PTPN7-201ENST00000309017 FABP6P51161 128 aa9.28□□□□□ -0.92
PTPN7-201ENST00000309017 TMEM251Q8N6I4 163 aa9.28□□□□□ -0.92
PTPN7-201ENST00000309017 RNF2Q99496 336 aa9.28□□□□□ -0.92
PTPN7-201ENST00000309017 S1PR3Q99500 378 aa9.28□□□□□ -0.92
PTPN7-201ENST00000309017 UBE2ZQ9H832 354 aaPredicted RBP9.28□□□□□ -0.92
PTPN7-201ENST00000309017 NPVFQ9HCQ7 196 aa9.28□□□□□ -0.92
PTPN7-201ENST00000309017 TP53TG3Q9ULZ0 132 aa9.28□□□□□ -0.92
PTPN7-201ENST00000309017 IL6RP08887 468 aaPredicted RBP9.28□□□□□ -0.92
PTPN7-201ENST00000309017 SRIP30626 198 aa9.28□□□□□ -0.92
PTPN7-201ENST00000309017 CENPWQ5EE01 88 aa9.28□□□□□ -0.92
PTPN7-201ENST00000309017 FAM19A2Q8N3H0 131 aa9.28□□□□□ -0.92
PTPN7-201ENST00000309017 STPG3Q8N7X2 389 aa9.28□□□□□ -0.92
PTPN7-201ENST00000309017 EAF1Q96JC9 268 aaPredicted RBP9.28□□□□□ -0.92
PTPN7-201ENST00000309017 SLC35E1Q96K37 410 aa9.28□□□□□ -0.92
PTPN7-201ENST00000309017 RNASE7Q9H1E1 156 aaKnown RBP9.28□□□□□ -0.92
PTPN7-201ENST00000309017 SLC35D1Q9NTN3 355 aa9.28□□□□□ -0.92
PTPN7-201ENST00000309017 SIT1Q9Y3P8 196 aa9.28□□□□□ -0.92
PTPN7-201ENST00000309017 COL6A6A6NMZ7 2263 aa9.28□□□□□ -0.92
PTPN7-201ENST00000309017 LAMA5O15230 3695 aa9.27□□□□□ -0.92
PTPN7-201ENST00000309017 FOXH1O75593 365 aa9.27□□□□□ -0.92
PTPN7-201ENST00000309017 LINC00614P0C842 121 aa9.27□□□□□ -0.92
PTPN7-201ENST00000309017 TRA2AQ13595 282 aaKnown RBP eCLIP9.27□□□□□ -0.92
PTPN7-201ENST00000309017 SSPNQ14714 243 aa9.27□□□□□ -0.92
PTPN7-201ENST00000309017 VWC2Q2TAL6 325 aa9.27□□□□□ -0.92
PTPN7-201ENST00000309017 FBXW9Q5XUX1 488 aa9.27□□□□□ -0.92
PTPN7-201ENST00000309017 TEPPQ6URK8 271 aa9.27□□□□□ -0.92
PTPN7-201ENST00000309017 K7EN84 100 aa9.27□□□□□ -0.93
PTPN7-201ENST00000309017 OR5G3P0C626 314 aa9.27□□□□□ -0.93
PTPN7-201ENST00000309017 BRWD1-AS2P59051 145 aa9.27□□□□□ -0.93
PTPN7-201ENST00000309017 SELENOTP62341 195 aa9.27□□□□□ -0.93
PTPN7-201ENST00000309017 FOXF2Q12947 444 aa9.27□□□□□ -0.93
PTPN7-201ENST00000309017 SLC35E4Q6ICL7 350 aa9.27□□□□□ -0.93
PTPN7-201ENST00000309017 ST6GALNAC3Q8NDV1 305 aa9.27□□□□□ -0.93
PTPN7-201ENST00000309017 FAM216AQ8WUB2 273 aa9.27□□□□□ -0.93
PTPN7-201ENST00000309017 UQCR10Q9UDW1 63 aa9.27□□□□□ -0.93
PTPN7-201ENST00000309017 CEP295Q9C0D2 2601 aa9.27□□□□□ -0.93
PTPN7-201ENST00000309017 K7ESF4 209 aa9.27□□□□□ -0.93
PTPN7-201ENST00000309017 SMPD2O60906 423 aa9.27□□□□□ -0.93
PTPN7-201ENST00000309017 SS18L1O75177 396 aaPredicted RBP9.27□□□□□ -0.93
PTPN7-201ENST00000309017 COL8A2P25067 703 aa9.27□□□□□ -0.93
PTPN7-201ENST00000309017 HINT1P49773 126 aaPredicted RBP9.27□□□□□ -0.93
PTPN7-201ENST00000309017 ERVK11-1P61568 191 aa9.27□□□□□ -0.93
PTPN7-201ENST00000309017 WDR73Q6P4I2 378 aa9.27□□□□□ -0.93
PTPN7-201ENST00000309017 TCTEX1D1Q8N7M0 179 aa9.27□□□□□ -0.93
PTPN7-201ENST00000309017 COQ2Q96H96 371 aa9.27□□□□□ -0.93
PTPN7-201ENST00000309017 ZNF331Q9NQX6 463 aaPredicted RBP9.27□□□□□ -0.93
PTPN7-201ENST00000309017 MRPS18CQ9Y3D5 142 aaKnown RBP9.27□□□□□ -0.93
PTPN7-201ENST00000309017 LGALS4P56470 323 aa9.26□□□□□ -0.93
PTPN7-201ENST00000309017 PSG7Q13046 419 aa9.26□□□□□ -0.93
PTPN7-201ENST00000309017 GAGE1Q13065 139 aa9.26□□□□□ -0.93
PTPN7-201ENST00000309017 EFNB3Q15768 340 aa9.26□□□□□ -0.93
PTPN7-201ENST00000309017 RPL39P5Q59GN2 51 aa9.26□□□□□ -0.93
PTPN7-201ENST00000309017 METRNQ9UJH8 293 aa9.26□□□□□ -0.93
PTPN7-201ENST00000309017 TRAV3A0A0B4J244 114 aa9.26□□□□□ -0.93
PTPN7-201ENST00000309017 GPX1P07203 203 aa9.26□□□□□ -0.93
PTPN7-201ENST00000309017 OR10J4P0C629 311 aa9.26□□□□□ -0.93
PTPN7-201ENST00000309017 P0C879 139 aa9.26□□□□□ -0.93
PTPN7-201ENST00000309017 NPY1RP25929 384 aa9.26□□□□□ -0.93
PTPN7-201ENST00000309017 TCF19Q9Y242 345 aa9.26□□□□□ -0.93
PTPN7-201ENST00000309017 SMIM21Q3B7S5 101 aa9.26□□□□□ -0.93
PTPN7-201ENST00000309017 KLHDC1Q8N7A1 406 aa9.26□□□□□ -0.93
PTPN7-201ENST00000309017 CNEP1R1Q8N9A8 125 aa9.26□□□□□ -0.93
PTPN7-201ENST00000309017 NHLRC2Q8NBF2 726 aa9.26□□□□□ -0.93
PTPN7-201ENST00000309017 BCL2L2Q92843 193 aaPredicted RBP9.26□□□□□ -0.93
PTPN7-201ENST00000309017 TMEM140Q9NV12 185 aa9.26□□□□□ -0.93
PTPN7-201ENST00000309017 NBEAQ8NFP9 2946 aa9.26□□□□□ -0.93
PTPN7-201ENST00000309017 HSBP1O75506 76 aa9.25□□□□□ -0.93
PTPN7-201ENST00000309017 MPV17P39210 176 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms