RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 PBDC1Q9BVG4 233 aa5.32□□□□□ -1.56
USP47-201ENST00000305481 NPCDR1Q9BY65 106 aa5.32□□□□□ -1.56
USP47-201ENST00000305481 SLC35B3Q9H1N7 401 aa5.32□□□□□ -1.56
USP47-201ENST00000305481 SAV1Q9H4B6 383 aaPredicted RBP5.32□□□□□ -1.56
USP47-201ENST00000305481 RALYQ9UKM9 306 aaKnown RBP5.32□□□□□ -1.56
USP47-201ENST00000305481 IGSF10Q6WRI0 2623 aa5.32□□□□□ -1.56
USP47-201ENST00000305481 SVEP1Q4LDE5 3571 aa5.32□□□□□ -1.56
USP47-201ENST00000305481 UPK2O00526 184 aa5.32□□□□□ -1.56
USP47-201ENST00000305481 IFNA10P01566 189 aa5.32□□□□□ -1.56
USP47-201ENST00000305481 SAA1P0DJI8 122 aaPredicted RBP5.32□□□□□ -1.56
USP47-201ENST00000305481 OR13C7P0DN81 318 aa5.32□□□□□ -1.56
USP47-201ENST00000305481 FGF7P21781 194 aa5.32□□□□□ -1.56
USP47-201ENST00000305481 ZNF137PP52743 207 aa5.32□□□□□ -1.56
USP47-201ENST00000305481 FGF8P55075 233 aaPredicted RBP5.32□□□□□ -1.56
USP47-201ENST00000305481 PRB3Q04118 309 aaPredicted RBP5.32□□□□□ -1.56
USP47-201ENST00000305481 RTL8BQ17RB0 113 aa5.32□□□□□ -1.56
USP47-201ENST00000305481 DHRS7BQ6IAN0 325 aaPredicted RBP5.32□□□□□ -1.56
USP47-201ENST00000305481 LCN15Q6UWW0 184 aa5.32□□□□□ -1.56
USP47-201ENST00000305481 KPTNQ9Y664 436 aa5.32□□□□□ -1.56
USP47-201ENST00000305481 GNLYP22749 145 aa5.31□□□□□ -1.56
USP47-201ENST00000305481 CD1BP29016 333 aa5.31□□□□□ -1.56
USP47-201ENST00000305481 OR10X1Q8NGY0 326 aa5.31□□□□□ -1.56
USP47-201ENST00000305481 ITLN2Q8WWU7 325 aaPredicted RBP5.31□□□□□ -1.56
USP47-201ENST00000305481 RITA1Q96K30 269 aa5.31□□□□□ -1.56
USP47-201ENST00000305481 NABP2Q9BQ15 211 aa5.31□□□□□ -1.56
USP47-201ENST00000305481 CBLN4Q9NTU7 201 aa5.31□□□□□ -1.56
USP47-201ENST00000305481 OR51B2Q9Y5P1 312 aa5.31□□□□□ -1.56
USP47-201ENST00000305481 COL12A1Q99715 3063 aa5.31□□□□□ -1.56
USP47-201ENST00000305481 SCAF4O95104 1147 aaKnown RBP5.31□□□□□ -1.56
USP47-201ENST00000305481 LY86O95711 162 aa5.31□□□□□ -1.56
USP47-201ENST00000305481 OPN1MWP04001 364 aa5.31□□□□□ -1.56
USP47-201ENST00000305481 SRP19P09132 144 aaKnown RBP5.31□□□□□ -1.56
USP47-201ENST00000305481 OPN1MW2P0DN77 364 aa5.31□□□□□ -1.56
USP47-201ENST00000305481 OPN1MW3P0DN78 364 aa5.31□□□□□ -1.56
USP47-201ENST00000305481 HOXA1P49639 335 aaPredicted RBP5.31□□□□□ -1.56
USP47-201ENST00000305481 TMEM177Q53S58 311 aa5.31□□□□□ -1.56
USP47-201ENST00000305481 ZNF506Q5JVG8 444 aa5.31□□□□□ -1.56
USP47-201ENST00000305481 OR9G1Q8NH87 305 aa5.31□□□□□ -1.56
USP47-201ENST00000305481 TMEM133Q9H2Q1 129 aa5.31□□□□□ -1.56
USP47-201ENST00000305481 SMDT1Q9H4I9 107 aa5.31□□□□□ -1.56
USP47-201ENST00000305481 BET1LQ9NYM9 111 aa5.31□□□□□ -1.56
USP47-201ENST00000305481 WDR83OSQ9Y284 106 aa5.31□□□□□ -1.56
USP47-201ENST00000305481 TEX50A0A1B0GTY4 177 aa5.31□□□□□ -1.56
USP47-201ENST00000305481 H7C2Y5 167 aa5.31□□□□□ -1.56
USP47-201ENST00000305481 HBE1P02100 147 aa5.31□□□□□ -1.56
USP47-201ENST00000305481 DEFA4P12838 97 aa5.31□□□□□ -1.56
USP47-201ENST00000305481 G0S2P27469 103 aa5.31□□□□□ -1.56
USP47-201ENST00000305481 TREML4Q6UXN2 200 aa5.31□□□□□ -1.56
USP47-201ENST00000305481 OSR1Q8TAX0 266 aaPredicted RBP5.31□□□□□ -1.56
USP47-201ENST00000305481 TMEM186Q96B77 213 aa5.31□□□□□ -1.56
USP47-201ENST00000305481 PRNDQ9UKY0 176 aa5.31□□□□□ -1.56
USP47-201ENST00000305481 ZNF257Q9Y2Q1 563 aa5.31□□□□□ -1.56
USP47-201ENST00000305481 LOC102723971A0A1B0GUV8 181 aa5.3□□□□□ -1.56
USP47-201ENST00000305481 E7EUB6 86 aa5.3□□□□□ -1.56
USP47-201ENST00000305481 C19orf84I3L1E1 186 aa5.3□□□□□ -1.56
USP47-201ENST00000305481 CLN5O75503 358 aa5.3□□□□□ -1.56
USP47-201ENST00000305481 KBTBD11O94819 623 aa5.3□□□□□ -1.56
USP47-201ENST00000305481 CA2P00918 260 aa5.3□□□□□ -1.56
USP47-201ENST00000305481 IGLV1-47P01700 117 aa5.3□□□□□ -1.56
USP47-201ENST00000305481 IGLV2-23P01705 113 aa5.3□□□□□ -1.56
USP47-201ENST00000305481 AKR1C3P42330 323 aa5.3□□□□□ -1.56
USP47-201ENST00000305481 ARSJQ5FYB0 599 aaPredicted RBP5.3□□□□□ -1.56
USP47-201ENST00000305481 ZNF787Q6DD87 383 aa5.3□□□□□ -1.56
USP47-201ENST00000305481 FAM71F2Q6NXP2 309 aa5.3□□□□□ -1.56
USP47-201ENST00000305481 CLEC2AQ6UVW9 174 aa5.3□□□□□ -1.56
USP47-201ENST00000305481 RXFP4Q8TDU9 374 aa5.3□□□□□ -1.56
USP47-201ENST00000305481 LHX4Q969G2 390 aa5.3□□□□□ -1.56
USP47-201ENST00000305481 HARBI1Q96MB7 349 aa5.3□□□□□ -1.56
USP47-201ENST00000305481 RAB1BQ9H0U4 201 aa5.3□□□□□ -1.56
USP47-201ENST00000305481 GNG13Q9P2W3 67 aa5.3□□□□□ -1.56
USP47-201ENST00000305481 IGHV2-26A0A0B4J1V2 119 aa5.3□□□□□ -1.56
USP47-201ENST00000305481 MAP1LC3B2A6NCE7 125 aa5.3□□□□□ -1.56
USP47-201ENST00000305481 HMGB3O15347 200 aaKnown RBP5.3□□□□□ -1.56
USP47-201ENST00000305481 PRCDQ00LT1 54 aa5.3□□□□□ -1.56
USP47-201ENST00000305481 MRGPRG-AS1Q2M3A8 158 aa5.3□□□□□ -1.56
USP47-201ENST00000305481 GCSAMLQ5JQS6 135 aa5.3□□□□□ -1.56
USP47-201ENST00000305481 FFAR4Q5NUL3 377 aa5.3□□□□□ -1.56
USP47-201ENST00000305481 WDR25Q64LD2 544 aaPredicted RBP5.3□□□□□ -1.56
USP47-201ENST00000305481 DTX2Q86UW9 622 aa5.3□□□□□ -1.56
USP47-201ENST00000305481 SLC24A4Q8NFF2 622 aa5.3□□□□□ -1.56
USP47-201ENST00000305481 OR10W1Q8NGF6 305 aa5.3□□□□□ -1.56
USP47-201ENST00000305481 C8orf46Q8TAG6 207 aa5.3□□□□□ -1.56
USP47-201ENST00000305481 FLYWCH2Q96CP2 140 aaKnown RBP5.3□□□□□ -1.56
USP47-201ENST00000305481 RAB39BQ96DA2 213 aa5.3□□□□□ -1.56
USP47-201ENST00000305481 CLCC1Q96S66 551 aa5.3□□□□□ -1.56
USP47-201ENST00000305481 C20orf24Q9BUV8 137 aa5.3□□□□□ -1.56
USP47-201ENST00000305481 GGACTQ9BVM4 153 aa5.3□□□□□ -1.56
USP47-201ENST00000305481 HINT2Q9BX68 163 aa5.3□□□□□ -1.56
USP47-201ENST00000305481 MAP1LC3BQ9GZQ8 125 aa5.3□□□□□ -1.56
USP47-201ENST00000305481 ACACBO00763 2458 aa5.3□□□□□ -1.56
USP47-201ENST00000305481 CGB1A6NKQ9 187 aa5.3□□□□□ -1.56
USP47-201ENST00000305481 C22orf46C9J442 243 aa5.3□□□□□ -1.56
USP47-201ENST00000305481 APOA2P02652 100 aa5.3□□□□□ -1.56
USP47-201ENST00000305481 HSPB1P04792 205 aaKnown RBP5.3□□□□□ -1.56
USP47-201ENST00000305481 NPY1RP25929 384 aa5.3□□□□□ -1.56
USP47-201ENST00000305481 AKR1D1P51857 326 aa5.3□□□□□ -1.56
USP47-201ENST00000305481 C4orf17Q53FE4 359 aa5.3□□□□□ -1.56
USP47-201ENST00000305481 AWAT1Q58HT5 328 aa5.3□□□□□ -1.56
USP47-201ENST00000305481 CYB561D1Q8N8Q1 229 aa5.3□□□□□ -1.56
USP47-201ENST00000305481 OR10G4Q8NGN3 311 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms