RNA–Protein interactions for RNA: ENST00000304465.7

SRGAP2C-201, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

TSL 5 BASIC

Gene SRGAP2C, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-201ENST00000304465 HNF4GQ14541 408 aa12.72□□□□□ -0.37
SRGAP2C-201ENST00000304465 FAM219AQ8IW50 185 aa12.72□□□□□ -0.37
SRGAP2C-201ENST00000304465 RNF126Q9BV68 326 aa12.72□□□□□ -0.37
SRGAP2C-201ENST00000304465 PRELID3BQ9Y3B1 194 aa12.72□□□□□ -0.37
SRGAP2C-201ENST00000304465 FAM90A9PA6NNJ1 464 aa12.71□□□□□ -0.38
SRGAP2C-201ENST00000304465 HPRT1P00492 218 aa12.71□□□□□ -0.38
SRGAP2C-201ENST00000304465 IGKV1D-33P01593 117 aa12.71□□□□□ -0.38
SRGAP2C-201ENST00000304465 IGKV1-33P01594 117 aa12.71□□□□□ -0.38
SRGAP2C-201ENST00000304465 IGKV1-16P04430 117 aa12.71□□□□□ -0.38
SRGAP2C-201ENST00000304465 SLC25A6P12236 298 aa12.71□□□□□ -0.38
SRGAP2C-201ENST00000304465 G6PCP35575 357 aa12.71□□□□□ -0.38
SRGAP2C-201ENST00000304465 LAMTOR1Q6IAA8 161 aa12.71□□□□□ -0.38
SRGAP2C-201ENST00000304465 OR4X2Q8NGF9 303 aa12.71□□□□□ -0.38
SRGAP2C-201ENST00000304465 MEGF8Q7Z7M0 2845 aa12.7□□□□□ -0.38
SRGAP2C-201ENST00000304465 IGHV1-3A0A0C4DH29 117 aa12.7□□□□□ -0.38
SRGAP2C-201ENST00000304465 A0A1W2PRX2 142 aa12.7□□□□□ -0.38
SRGAP2C-201ENST00000304465 SH2D7A6NKC9 451 aaPredicted RBP12.7□□□□□ -0.38
SRGAP2C-201ENST00000304465 MPC2O95563 127 aa12.7□□□□□ -0.38
SRGAP2C-201ENST00000304465 KRASP01116 189 aa12.7□□□□□ -0.38
SRGAP2C-201ENST00000304465 PSMB6P28072 239 aa12.7□□□□□ -0.38
SRGAP2C-201ENST00000304465 RAB32Q13637 225 aa12.7□□□□□ -0.38
SRGAP2C-201ENST00000304465 PDLIM3Q53GG5 364 aaPredicted RBP12.7□□□□□ -0.38
SRGAP2C-201ENST00000304465 FBLN7Q53RD9 439 aa12.7□□□□□ -0.38
SRGAP2C-201ENST00000304465 C1QL4Q86Z23 238 aa12.7□□□□□ -0.38
SRGAP2C-201ENST00000304465 TGIF2LXQ8IUE1 241 aa12.7□□□□□ -0.38
SRGAP2C-201ENST00000304465 OR4S2Q8NH73 311 aa12.7□□□□□ -0.38
SRGAP2C-201ENST00000304465 SLC35D1Q9NTN3 355 aa12.7□□□□□ -0.38
SRGAP2C-201ENST00000304465 COMMD9Q9P000 198 aa12.7□□□□□ -0.38
SRGAP2C-201ENST00000304465 GSKIPQ9P0R6 139 aa12.7□□□□□ -0.38
SRGAP2C-201ENST00000304465 TNCP24821 2201 aa12.7□□□□□ -0.38
SRGAP2C-201ENST00000304465 PIGBOS1A0A0B4J2F0 54 aa12.69□□□□□ -0.38
SRGAP2C-201ENST00000304465 A0A1B0GU03 582 aa12.69□□□□□ -0.38
SRGAP2C-201ENST00000304465 SRRM4A7MD48 611 aaKnown RBP12.69□□□□□ -0.38
SRGAP2C-201ENST00000304465 TXNL1O43396 289 aa12.69□□□□□ -0.38
SRGAP2C-201ENST00000304465 CRYZL1O95825 349 aa12.69□□□□□ -0.38
SRGAP2C-201ENST00000304465 MBPP02686 304 aaPredicted RBP12.69□□□□□ -0.38
SRGAP2C-201ENST00000304465 POU2AF1Q16633 256 aa12.69□□□□□ -0.38
SRGAP2C-201ENST00000304465 KHDC1LQ5JSQ8 128 aa12.69□□□□□ -0.38
SRGAP2C-201ENST00000304465 WIPF2Q8TF74 440 aaPredicted RBP12.69□□□□□ -0.38
SRGAP2C-201ENST00000304465 HYLS1Q96M11 299 aa12.69□□□□□ -0.38
SRGAP2C-201ENST00000304465 IGHV3-72A0A0B4J1Y9 119 aa12.68□□□□□ -0.38
SRGAP2C-201ENST00000304465 TCRBV4S1A1TA0A5B7 111 aa12.68□□□□□ -0.38
SRGAP2C-201ENST00000304465 MARCH11A6NNE9 402 aa12.68□□□□□ -0.38
SRGAP2C-201ENST00000304465 NCBP2LA6PVI3 153 aaKnown RBP12.68□□□□□ -0.38
SRGAP2C-201ENST00000304465 FGF16O43320 207 aa12.68□□□□□ -0.38
SRGAP2C-201ENST00000304465 AMY1AP04745 511 aa12.68□□□□□ -0.38
SRGAP2C-201ENST00000304465 IL6RP08887 468 aaPredicted RBP12.68□□□□□ -0.38
SRGAP2C-201ENST00000304465 SLC25A4P12235 298 aa12.68□□□□□ -0.38
SRGAP2C-201ENST00000304465 LYL1P12980 280 aa12.68□□□□□ -0.38
SRGAP2C-201ENST00000304465 TAGLNQ01995 201 aaKnown RBP12.68□□□□□ -0.38
SRGAP2C-201ENST00000304465 ID3Q02535 119 aa12.68□□□□□ -0.38
SRGAP2C-201ENST00000304465 LRRC37A5PQ49AS3 106 aa12.68□□□□□ -0.38
SRGAP2C-201ENST00000304465 TMEM177Q53S58 311 aa12.68□□□□□ -0.38
SRGAP2C-201ENST00000304465 C11orf87Q6NUJ2 197 aa12.68□□□□□ -0.38
SRGAP2C-201ENST00000304465 VKORC1L1Q8N0U8 176 aa12.68□□□□□ -0.38
SRGAP2C-201ENST00000304465 OR2T10Q8NGZ9 312 aa12.68□□□□□ -0.38
SRGAP2C-201ENST00000304465 GRPEL2Q8TAA5 225 aa12.68□□□□□ -0.38
SRGAP2C-201ENST00000304465 SPIN2AQ99865 258 aa12.68□□□□□ -0.38
SRGAP2C-201ENST00000304465 SPIN2BQ9BPZ2 258 aa12.68□□□□□ -0.38
SRGAP2C-201ENST00000304465 C11orf1Q9H5F2 150 aa12.68□□□□□ -0.38
SRGAP2C-201ENST00000304465 CACNG5Q9UF02 275 aa12.68□□□□□ -0.38
SRGAP2C-201ENST00000304465 TSSC4Q9Y5U2 329 aaPredicted RBP12.68□□□□□ -0.38
SRGAP2C-201ENST00000304465 PF4V1P10720 104 aa12.67□□□□□ -0.38
SRGAP2C-201ENST00000304465 AKR1C2P52895 323 aa12.67□□□□□ -0.38
SRGAP2C-201ENST00000304465 SMCO1Q147U7 214 aa12.67□□□□□ -0.38
SRGAP2C-201ENST00000304465 CXorf66Q5JRM2 361 aaPredicted RBP12.67□□□□□ -0.38
SRGAP2C-201ENST00000304465 C9orf62Q8N4C0 152 aa12.67□□□□□ -0.38
SRGAP2C-201ENST00000304465 C5orf56Q8N8D9 126 aa12.67□□□□□ -0.38
SRGAP2C-201ENST00000304465 RRNAD1Q96FB5 475 aaKnown RBP12.67□□□□□ -0.38
SRGAP2C-201ENST00000304465 COA4Q9NYJ1 87 aa12.67□□□□□ -0.38
SRGAP2C-201ENST00000304465 OR5AC2Q9NZP5 309 aa12.67□□□□□ -0.38
SRGAP2C-201ENST00000304465 PSMB11A5LHX3 300 aa12.66□□□□□ -0.38
SRGAP2C-201ENST00000304465 K7EPK0 472 aa12.66□□□□□ -0.38
SRGAP2C-201ENST00000304465 APOA2P02652 100 aa12.66□□□□□ -0.38
SRGAP2C-201ENST00000304465 OR9G9P0C7N8 305 aa12.66□□□□□ -0.38
SRGAP2C-201ENST00000304465 RRASP10301 218 aa12.66□□□□□ -0.38
SRGAP2C-201ENST00000304465 NQO2P16083 231 aa12.66□□□□□ -0.38
SRGAP2C-201ENST00000304465 CD1BP29016 333 aa12.66□□□□□ -0.38
SRGAP2C-201ENST00000304465 FGL1Q08830 312 aa12.66□□□□□ -0.38
SRGAP2C-201ENST00000304465 RTL8BQ17RB0 113 aa12.66□□□□□ -0.38
SRGAP2C-201ENST00000304465 AARDQ4LEZ3 155 aa12.66□□□□□ -0.38
SRGAP2C-201ENST00000304465 TMEM65Q6PI78 240 aa12.66□□□□□ -0.38
SRGAP2C-201ENST00000304465 PDPNQ86YL7 162 aa12.66□□□□□ -0.38
SRGAP2C-201ENST00000304465 FAM71E2Q8N5Q1 922 aa12.66□□□□□ -0.38
SRGAP2C-201ENST00000304465 OR1S1Q8NH92 325 aa12.66□□□□□ -0.38
SRGAP2C-201ENST00000304465 EAF1Q96JC9 268 aaPredicted RBP12.66□□□□□ -0.38
SRGAP2C-201ENST00000304465 RITA1Q96K30 269 aa12.66□□□□□ -0.38
SRGAP2C-201ENST00000304465 MBD2Q9UBB5 411 aa12.66□□□□□ -0.38
SRGAP2C-201ENST00000304465 RCL1Q9Y2P8 373 aaKnown RBP12.66□□□□□ -0.38
SRGAP2C-201ENST00000304465 WASHC3Q9Y3C0 194 aa12.66□□□□□ -0.38
SRGAP2C-201ENST00000304465 VWFP04275 2813 aa12.66□□□□□ -0.38
SRGAP2C-201ENST00000304465 TRAV3A0A0B4J244 114 aa12.65□□□□□ -0.38
SRGAP2C-201ENST00000304465 HMSDA8MTL9 139 aa12.65□□□□□ -0.38
SRGAP2C-201ENST00000304465 ATG12O94817 140 aa12.65□□□□□ -0.38
SRGAP2C-201ENST00000304465 MOSP00540 346 aa12.65□□□□□ -0.38
SRGAP2C-201ENST00000304465 IGLV2-23P01705 113 aa12.65□□□□□ -0.38
SRGAP2C-201ENST00000304465 CXCL2P19875 107 aa12.65□□□□□ -0.38
SRGAP2C-201ENST00000304465 MC5RP33032 325 aa12.65□□□□□ -0.38
SRGAP2C-201ENST00000304465 LGALSLQ3ZCW2 172 aaPredicted RBP12.65□□□□□ -0.38
SRGAP2C-201ENST00000304465 PRSS54Q6PEW0 395 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms