RNA–Protein interactions for RNA: ENST00000302278.7

ITGB1-201, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ITGB1, Length 3,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-201ENST00000302278 GSTT2P0CG29 244 aa4.68□□□□□ -1.66
ITGB1-201ENST00000302278 GSTT2BP0CG30 244 aa4.68□□□□□ -1.66
ITGB1-201ENST00000302278 MYL12AP19105 171 aa4.68□□□□□ -1.66
ITGB1-201ENST00000302278 RPL27AP46776 148 aaKnown RBP4.68□□□□□ -1.66
ITGB1-201ENST00000302278 FAM3BP58499 235 aaPredicted RBP4.68□□□□□ -1.66
ITGB1-201ENST00000302278 OR11H2Q8NH07 326 aa4.68□□□□□ -1.66
ITGB1-201ENST00000302278 OR10J5Q8NHC4 309 aa4.68□□□□□ -1.66
ITGB1-201ENST00000302278 MFSD2BA6NFX1 497 aa4.68□□□□□ -1.66
ITGB1-201ENST00000302278 MFNGO00587 321 aa4.68□□□□□ -1.66
ITGB1-201ENST00000302278 MPPED1O15442 326 aa4.68□□□□□ -1.66
ITGB1-201ENST00000302278 RBFOX2O43251 390 aaKnown RBP eCLIP4.68□□□□□ -1.66
ITGB1-201ENST00000302278 CRYZL1O95825 349 aa4.68□□□□□ -1.66
ITGB1-201ENST00000302278 RBMY1A1P0DJD3 496 aaKnown RBP4.68□□□□□ -1.66
ITGB1-201ENST00000302278 RBMY1CP0DJD4 496 aa4.68□□□□□ -1.66
ITGB1-201ENST00000302278 OR2B8PP59922 312 aa4.68□□□□□ -1.66
ITGB1-201ENST00000302278 RBMY1FQ15415 496 aaKnown RBP4.68□□□□□ -1.66
ITGB1-201ENST00000302278 C10orf55Q5SWW7 151 aa4.68□□□□□ -1.66
ITGB1-201ENST00000302278 C1orf146Q5VVC0 180 aa4.68□□□□□ -1.66
ITGB1-201ENST00000302278 HSD17B13Q7Z5P4 300 aaPredicted RBP4.68□□□□□ -1.66
ITGB1-201ENST00000302278 CBR4Q8N4T8 237 aa4.68□□□□□ -1.66
ITGB1-201ENST00000302278 MS4A15Q8N5U1 240 aa4.68□□□□□ -1.66
ITGB1-201ENST00000302278 C9orf16Q9BUW7 83 aa4.68□□□□□ -1.66
ITGB1-201ENST00000302278 UBQLN2Q9UHD9 624 aa4.68□□□□□ -1.66
ITGB1-201ENST00000302278 BLOC1S6Q9UL45 172 aa4.68□□□□□ -1.66
ITGB1-201ENST00000302278 CLEC3BP05452 202 aa4.67□□□□□ -1.66
ITGB1-201ENST00000302278 AREGP15514 252 aa4.67□□□□□ -1.66
ITGB1-201ENST00000302278 WNT4P56705 351 aa4.67□□□□□ -1.66
ITGB1-201ENST00000302278 MED22Q15528 200 aa4.67□□□□□ -1.66
ITGB1-201ENST00000302278 SMN1Q16637 294 aaKnown RBP4.67□□□□□ -1.66
ITGB1-201ENST00000302278 OR10K2Q6IF99 312 aa4.67□□□□□ -1.66
ITGB1-201ENST00000302278 NANOGP1Q8N7R0 232 aa4.67□□□□□ -1.66
ITGB1-201ENST00000302278 CSNK1G2-AS1Q8NCQ2 148 aa4.67□□□□□ -1.66
ITGB1-201ENST00000302278 OR56B1Q8NGI3 324 aa4.67□□□□□ -1.66
ITGB1-201ENST00000302278 ARHGAP5-AS1Q96IT6 56 aa4.67□□□□□ -1.66
ITGB1-201ENST00000302278 AMBNQ9NP70 447 aa4.67□□□□□ -1.66
ITGB1-201ENST00000302278 MRPS7Q9Y2R9 242 aaKnown RBP4.67□□□□□ -1.66
ITGB1-201ENST00000302278 BOLA1Q9Y3E2 137 aa4.67□□□□□ -1.66
ITGB1-201ENST00000302278 X6R8D5 127 aa4.67□□□□□ -1.66
ITGB1-201ENST00000302278 DTYMKP23919 212 aa4.67□□□□□ -1.66
ITGB1-201ENST00000302278 ZIK1Q3SY52 487 aaPredicted RBP4.67□□□□□ -1.66
ITGB1-201ENST00000302278 IGSF11Q5DX21 431 aa4.67□□□□□ -1.66
ITGB1-201ENST00000302278 IZUMO2Q6UXV1 221 aa4.67□□□□□ -1.66
ITGB1-201ENST00000302278 ZNF66Q6ZN08 573 aa4.67□□□□□ -1.66
ITGB1-201ENST00000302278 OR4S2Q8NH73 311 aa4.67□□□□□ -1.66
ITGB1-201ENST00000302278 SETD6Q8TBK2 473 aa4.67□□□□□ -1.66
ITGB1-201ENST00000302278 HSD17B10Q99714 261 aaKnown RBP4.67□□□□□ -1.66
ITGB1-201ENST00000302278 CMSS1Q9BQ75 279 aaKnown RBP4.67□□□□□ -1.66
ITGB1-201ENST00000302278 SMPXQ9UHP9 88 aa4.67□□□□□ -1.66
ITGB1-201ENST00000302278 LSM2Q9Y333 95 aaKnown RBP4.67□□□□□ -1.66
ITGB1-201ENST00000302278 RBMX2Q9Y388 322 aaKnown RBP4.67□□□□□ -1.66
ITGB1-201ENST00000302278 NACAE9PAV3 2078 aa4.67□□□□□ -1.66
ITGB1-201ENST00000302278 HMX3A6NHT5 357 aa4.67□□□□□ -1.66
ITGB1-201ENST00000302278 CTSDP07339 412 aaPredicted RBP4.67□□□□□ -1.66
ITGB1-201ENST00000302278 APELAP0DMC3 54 aa4.67□□□□□ -1.66
ITGB1-201ENST00000302278 HLA-GP17693 338 aa4.67□□□□□ -1.66
ITGB1-201ENST00000302278 RNF212Q495C1 297 aa4.67□□□□□ -1.66
ITGB1-201ENST00000302278 LIPKQ5VXJ0 399 aa4.67□□□□□ -1.66
ITGB1-201ENST00000302278 IDO2Q6ZQW0 420 aa4.67□□□□□ -1.66
ITGB1-201ENST00000302278 CROCCP3Q8IVE0 287 aa4.67□□□□□ -1.66
ITGB1-201ENST00000302278 DGCR14Q96DF8 476 aaKnown RBP4.67□□□□□ -1.66
ITGB1-201ENST00000302278 VSIRQ9H7M9 311 aa4.67□□□□□ -1.66
ITGB1-201ENST00000302278 SMPD3Q9NY59 655 aaPredicted RBP4.67□□□□□ -1.66
ITGB1-201ENST00000302278 DNAH5Q8TE73 4624 aa4.67□□□□□ -1.66
ITGB1-201ENST00000302278 CHEK1O14757 476 aa4.66□□□□□ -1.66
ITGB1-201ENST00000302278 SPP1P10451 314 aa4.66□□□□□ -1.66
ITGB1-201ENST00000302278 RAB6AP20340 208 aa4.66□□□□□ -1.66
ITGB1-201ENST00000302278 LAIR2Q6ISS4 152 aa4.66□□□□□ -1.66
ITGB1-201ENST00000302278 TRPT1Q86TN4 253 aaKnown RBP4.66□□□□□ -1.66
ITGB1-201ENST00000302278 AIFM2Q9BRQ8 373 aa4.66□□□□□ -1.66
ITGB1-201ENST00000302278 KCNK15Q9H427 330 aa4.66□□□□□ -1.66
ITGB1-201ENST00000302278 FBXL17Q9UF56 701 aa4.66□□□□□ -1.66
ITGB1-201ENST00000302278 HERC1Q15751 4861 aa4.66□□□□□ -1.66
ITGB1-201ENST00000302278 IGHV7-4-1A0A0J9YVY3 117 aa4.66□□□□□ -1.66
ITGB1-201ENST00000302278 IGLL5B9A064 214 aa4.66□□□□□ -1.66
ITGB1-201ENST00000302278 RPL30P62888 115 aaKnown RBP4.66□□□□□ -1.66
ITGB1-201ENST00000302278 CNPY1Q3B7I2 92 aa4.66□□□□□ -1.66
ITGB1-201ENST00000302278 C19orf35Q6ZS72 473 aa4.66□□□□□ -1.66
ITGB1-201ENST00000302278 TXN2Q99757 166 aa4.66□□□□□ -1.66
ITGB1-201ENST00000302278 THYN1Q9P016 225 aa4.66□□□□□ -1.66
ITGB1-201ENST00000302278 ELOA3CA0A087WX78 387 aaPredicted RBP4.66□□□□□ -1.66
ITGB1-201ENST00000302278 MRPS14O60783 128 aaKnown RBP4.66□□□□□ -1.66
ITGB1-201ENST00000302278 RPL35AP18077 110 aaKnown RBP4.66□□□□□ -1.66
ITGB1-201ENST00000302278 RPL8P62917 257 aaKnown RBP4.66□□□□□ -1.66
ITGB1-201ENST00000302278 TMEM187Q14656 261 aa4.66□□□□□ -1.66
ITGB1-201ENST00000302278 ACSM3Q53FZ2 586 aa4.66□□□□□ -1.66
ITGB1-201ENST00000302278 ZNF575Q86XF7 245 aa4.66□□□□□ -1.66
ITGB1-201ENST00000302278 ZBTB8BQ8NAP8 495 aaPredicted RBP4.66□□□□□ -1.66
ITGB1-201ENST00000302278 NEU1Q99519 415 aa4.66□□□□□ -1.66
ITGB1-201ENST00000302278 C8orf4Q9NR00 106 aa4.66□□□□□ -1.66
ITGB1-201ENST00000302278 PSORS1C1Q9UIG5 152 aa4.66□□□□□ -1.66
ITGB1-201ENST00000302278 PRELID3BQ9Y3B1 194 aa4.66□□□□□ -1.66
ITGB1-201ENST00000302278 IGHV4-28A0A0C4DH34 117 aa4.65□□□□□ -1.66
ITGB1-201ENST00000302278 A0A1W2PPK0 400 aa4.65□□□□□ -1.66
ITGB1-201ENST00000302278 ZNF320A2RRD8 509 aa4.65□□□□□ -1.66
ITGB1-201ENST00000302278 ACTL6BO94805 426 aa4.65□□□□□ -1.66
ITGB1-201ENST00000302278 CTXN2P0C2S0 81 aa4.65□□□□□ -1.66
ITGB1-201ENST00000302278 CD36P16671 472 aa4.65□□□□□ -1.66
ITGB1-201ENST00000302278 TAS2R31P59538 309 aa4.65□□□□□ -1.66
ITGB1-201ENST00000302278 OXA1LQ15070 435 aa4.65□□□□□ -1.66
ITGB1-201ENST00000302278 TIMM50Q3ZCQ8 353 aa4.65□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms