RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 FLNCQ14315 2725 aa18■□□□□ 0.47
SMAD1-201ENST00000302085 MDKP21741 143 aaPredicted RBP18■□□□□ 0.47
SMAD1-201ENST00000302085 PRTN3P24158 256 aa18■□□□□ 0.47
SMAD1-201ENST00000302085 SRSF1Q07955 248 aaKnown RBP eCLIP18■□□□□ 0.47
SMAD1-201ENST00000302085 LDLRAD2Q5SZI1 272 aa18■□□□□ 0.47
SMAD1-201ENST00000302085 ETV3LQ6ZN32 361 aa18■□□□□ 0.47
SMAD1-201ENST00000302085 CCDC28AQ8IWP9 274 aa18■□□□□ 0.47
SMAD1-201ENST00000302085 OR11H6Q8NGC7 330 aa18■□□□□ 0.47
SMAD1-201ENST00000302085 TMEM167AQ8TBQ9 72 aa18■□□□□ 0.47
SMAD1-201ENST00000302085 BPESC1Q9GZL8 116 aa18■□□□□ 0.47
SMAD1-201ENST00000302085 ENY2Q9NPA8 101 aa18■□□□□ 0.47
SMAD1-201ENST00000302085 AMMECR1Q9Y4X0 333 aaPredicted RBP18■□□□□ 0.47
SMAD1-201ENST00000302085 PRSS46E5RG02 174 aa17.99■□□□□ 0.47
SMAD1-201ENST00000302085 OR4A5Q8NH83 315 aa17.99■□□□□ 0.47
SMAD1-201ENST00000302085 NARS2Q96I59 477 aaKnown RBP17.99■□□□□ 0.47
SMAD1-201ENST00000302085 TMEM218A2RU14 115 aa17.99■□□□□ 0.47
SMAD1-201ENST00000302085 SCAF4O95104 1147 aaKnown RBP17.99■□□□□ 0.47
SMAD1-201ENST00000302085 SNCAP37840 140 aa17.99■□□□□ 0.47
SMAD1-201ENST00000302085 LMO4P61968 165 aa17.99■□□□□ 0.47
SMAD1-201ENST00000302085 C1orf122Q6ZSJ8 110 aa17.99■□□□□ 0.47
SMAD1-201ENST00000302085 CENPVQ7Z7K6 275 aaPredicted RBP17.99■□□□□ 0.47
SMAD1-201ENST00000302085 MOB3BQ86TA1 216 aa17.99■□□□□ 0.47
SMAD1-201ENST00000302085 OR5B3Q8NH48 314 aa17.99■□□□□ 0.47
SMAD1-201ENST00000302085 VSIRQ9H7M9 311 aa17.99■□□□□ 0.47
SMAD1-201ENST00000302085 ZNF462Q96JM2 2506 aa17.98■□□□□ 0.47
SMAD1-201ENST00000302085 USF1P22415 310 aaPredicted RBP17.98■□□□□ 0.47
SMAD1-201ENST00000302085 LGALS7P47929 136 aa17.98■□□□□ 0.47
SMAD1-201ENST00000302085 RPL8P62917 257 aaKnown RBP17.98■□□□□ 0.47
SMAD1-201ENST00000302085 PAX2Q02962 417 aa17.98■□□□□ 0.47
SMAD1-201ENST00000302085 KLRD1Q13241 179 aa17.98■□□□□ 0.47
SMAD1-201ENST00000302085 DPPA3Q6W0C5 159 aa17.98■□□□□ 0.47
SMAD1-201ENST00000302085 CLDND2Q8NHS1 167 aa17.98■□□□□ 0.47
SMAD1-201ENST00000302085 RPEQ96AT9 228 aa17.98■□□□□ 0.47
SMAD1-201ENST00000302085 SCRT1Q9BWW7 348 aa17.98■□□□□ 0.47
SMAD1-201ENST00000302085 TREM1Q9NP99 234 aa17.98■□□□□ 0.47
SMAD1-201ENST00000302085 TIMM9Q9Y5J7 89 aa17.98■□□□□ 0.47
SMAD1-201ENST00000302085 RNASEK-C17orf49H0YIS7 233 aa17.97■□□□□ 0.47
SMAD1-201ENST00000302085 CA2P00918 260 aa17.97■□□□□ 0.47
SMAD1-201ENST00000302085 CD5P06127 495 aa17.97■□□□□ 0.47
SMAD1-201ENST00000302085 SERF2P84101 59 aa17.97■□□□□ 0.47
SMAD1-201ENST00000302085 SP5Q6BEB4 398 aaPredicted RBP17.97■□□□□ 0.47
SMAD1-201ENST00000302085 SPSB3Q6PJ21 355 aa17.97■□□□□ 0.47
SMAD1-201ENST00000302085 COMMD1Q8N668 190 aa17.97■□□□□ 0.47
SMAD1-201ENST00000302085 SLC24A4Q8NFF2 622 aa17.97■□□□□ 0.47
SMAD1-201ENST00000302085 VSTM2AQ8TAG5 236 aa17.97■□□□□ 0.47
SMAD1-201ENST00000302085 CCL19Q99731 98 aa17.97■□□□□ 0.47
SMAD1-201ENST00000302085 PLEKHA3Q9HB20 300 aa17.97■□□□□ 0.47
SMAD1-201ENST00000302085 RPRMQ9NS64 109 aa17.97■□□□□ 0.47
SMAD1-201ENST00000302085 A0A1B0GV50 99 aa17.97■□□□□ 0.47
SMAD1-201ENST00000302085 SCO1O75880 301 aa17.97■□□□□ 0.47
SMAD1-201ENST00000302085 FGF7P21781 194 aa17.97■□□□□ 0.47
SMAD1-201ENST00000302085 NPY1RP25929 384 aa17.97■□□□□ 0.47
SMAD1-201ENST00000302085 CCL20P78556 96 aa17.97■□□□□ 0.47
SMAD1-201ENST00000302085 LCN2P80188 198 aa17.97■□□□□ 0.47
SMAD1-201ENST00000302085 HNF4GQ14541 408 aa17.97■□□□□ 0.47
SMAD1-201ENST00000302085 MRGPRG-AS1Q2M3A8 158 aa17.97■□□□□ 0.47
SMAD1-201ENST00000302085 KIR3DL3Q8N743 410 aa17.97■□□□□ 0.47
SMAD1-201ENST00000302085 SLC25A17O43808 307 aa17.96■□□□□ 0.47
SMAD1-201ENST00000302085 H2AFB1P0C5Y9 115 aa17.96■□□□□ 0.47
SMAD1-201ENST00000302085 PDLIM4P50479 330 aa17.96■□□□□ 0.47
SMAD1-201ENST00000302085 RAB11AP62491 216 aa17.96■□□□□ 0.47
SMAD1-201ENST00000302085 VMA21Q3ZAQ7 101 aa17.96■□□□□ 0.47
SMAD1-201ENST00000302085 TPTE2P1Q5T6R2 138 aa17.96■□□□□ 0.47
SMAD1-201ENST00000302085 COMMD5Q9GZQ3 224 aa17.96■□□□□ 0.47
SMAD1-201ENST00000302085 ZNF430Q9H8G1 570 aaPredicted RBP17.96■□□□□ 0.47
SMAD1-201ENST00000302085 NDUFA4L2Q9NRX3 87 aa17.96■□□□□ 0.47
SMAD1-201ENST00000302085 EPG5Q9HCE0 2579 aa17.95■□□□□ 0.46
SMAD1-201ENST00000302085 A0A1W2PPI3 338 aa17.95■□□□□ 0.46
SMAD1-201ENST00000302085 ODF3BA8MYP8 253 aa17.95■□□□□ 0.46
SMAD1-201ENST00000302085 C9JQL5 133 aa17.95■□□□□ 0.46
SMAD1-201ENST00000302085 E7EUB6 86 aa17.95■□□□□ 0.46
SMAD1-201ENST00000302085 IFNA4P05014 189 aa17.95■□□□□ 0.46
SMAD1-201ENST00000302085 HTR1DP28221 377 aa17.95■□□□□ 0.46
SMAD1-201ENST00000302085 CD1BP29016 333 aa17.95■□□□□ 0.46
SMAD1-201ENST00000302085 TPSG1Q9NRR2 321 aa17.95■□□□□ 0.46
SMAD1-201ENST00000302085 DVL1P1P54792 670 aaPredicted RBP17.95■□□□□ 0.46
SMAD1-201ENST00000302085 VMO1Q7Z5L0 202 aa17.95■□□□□ 0.46
SMAD1-201ENST00000302085 OR10W1Q8NGF6 305 aa17.95■□□□□ 0.46
SMAD1-201ENST00000302085 OR1L8Q8NGR8 309 aa17.95■□□□□ 0.46
SMAD1-201ENST00000302085 GGACTQ9BVM4 153 aa17.95■□□□□ 0.46
SMAD1-201ENST00000302085 DPM3Q9P2X0 92 aa17.95■□□□□ 0.46
SMAD1-201ENST00000302085 WDR83OSQ9Y284 106 aa17.95■□□□□ 0.46
SMAD1-201ENST00000302085 CNTFRP26992 372 aa17.94■□□□□ 0.46
SMAD1-201ENST00000302085 DLK1P80370 383 aa17.94■□□□□ 0.46
SMAD1-201ENST00000302085 UNKLQ9H9P5 680 aaKnown RBP17.94■□□□□ 0.46
SMAD1-201ENST00000302085 KPTNQ9Y664 436 aa17.94■□□□□ 0.46
SMAD1-201ENST00000302085 CGB1A6NKQ9 187 aa17.93■□□□□ 0.46
SMAD1-201ENST00000302085 APOC3P02656 99 aa17.93■□□□□ 0.46
SMAD1-201ENST00000302085 CRYGBP07316 175 aa17.93■□□□□ 0.46
SMAD1-201ENST00000302085 ADCYAP1P18509 176 aa17.93■□□□□ 0.46
SMAD1-201ENST00000302085 ELLP55199 621 aaPredicted RBP17.93■□□□□ 0.46
SMAD1-201ENST00000302085 TEX45Q8NA69 505 aa17.93■□□□□ 0.46
SMAD1-201ENST00000302085 SFT2D1Q8WV19 159 aa17.93■□□□□ 0.46
SMAD1-201ENST00000302085 NPCDR1Q9BY65 106 aa17.93■□□□□ 0.46
SMAD1-201ENST00000302085 SIRPDQ9H106 197 aa17.93■□□□□ 0.46
SMAD1-201ENST00000302085 MYO18BQ8IUG5 2567 aa17.93■□□□□ 0.46
SMAD1-201ENST00000302085 ZNF726P1Q15940 193 aa17.93■□□□□ 0.46
SMAD1-201ENST00000302085 GUK1Q16774 197 aa17.93■□□□□ 0.46
SMAD1-201ENST00000302085 TMEM41BQ5BJD5 291 aa17.93■□□□□ 0.46
SMAD1-201ENST00000302085 ACSM6Q6P461 480 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms