RNA–Protein interactions for RNA: ENST00000281834.3

TNFSF4-201, Transcript of TNF superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF4, Length 3,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-201ENST00000281834 CA2P00918 260 aa4.95□□□□□ -1.62
TNFSF4-201ENST00000281834 CT45A6P0DMU7 189 aa4.95□□□□□ -1.62
TNFSF4-201ENST00000281834 CT45A5P0DMU8 189 aa4.95□□□□□ -1.62
TNFSF4-201ENST00000281834 CT45A7P0DMV0 189 aa4.95□□□□□ -1.62
TNFSF4-201ENST00000281834 CD24P25063 80 aa4.95□□□□□ -1.62
TNFSF4-201ENST00000281834 GATA4P43694 442 aa4.95□□□□□ -1.62
TNFSF4-201ENST00000281834 SPCS3P61009 180 aa4.95□□□□□ -1.62
TNFSF4-201ENST00000281834 RTL8BQ17RB0 113 aa4.95□□□□□ -1.62
TNFSF4-201ENST00000281834 PDZD11Q5EBL8 140 aa4.95□□□□□ -1.62
TNFSF4-201ENST00000281834 LHFPL4Q7Z7J7 247 aa4.95□□□□□ -1.62
TNFSF4-201ENST00000281834 NUP37Q8NFH4 326 aa4.95□□□□□ -1.62
TNFSF4-201ENST00000281834 GAL3ST2Q9H3Q3 398 aa4.95□□□□□ -1.62
TNFSF4-201ENST00000281834 COA4Q9NYJ1 87 aa4.95□□□□□ -1.62
TNFSF4-201ENST00000281834 DOK5Q9P104 306 aa4.95□□□□□ -1.62
TNFSF4-201ENST00000281834 RPUSD1Q9UJJ7 312 aaKnown RBP4.95□□□□□ -1.62
TNFSF4-201ENST00000281834 FCN3O75636 299 aa4.95□□□□□ -1.62
TNFSF4-201ENST00000281834 WNT2P09544 360 aa4.95□□□□□ -1.62
TNFSF4-201ENST00000281834 SAA1P0DJI8 122 aaPredicted RBP4.95□□□□□ -1.62
TNFSF4-201ENST00000281834 NPY1RP25929 384 aa4.95□□□□□ -1.62
TNFSF4-201ENST00000281834 CDC34P49427 236 aaPredicted RBP4.95□□□□□ -1.62
TNFSF4-201ENST00000281834 C19orf35Q6ZS72 473 aa4.95□□□□□ -1.62
TNFSF4-201ENST00000281834 FAM216AQ8WUB2 273 aa4.95□□□□□ -1.62
TNFSF4-201ENST00000281834 VKORC1Q9BQB6 163 aa4.95□□□□□ -1.62
TNFSF4-201ENST00000281834 COMMD5Q9GZQ3 224 aa4.95□□□□□ -1.62
TNFSF4-201ENST00000281834 UNKLQ9H9P5 680 aaKnown RBP4.95□□□□□ -1.62
TNFSF4-201ENST00000281834 PLEKHA3Q9HB20 300 aa4.95□□□□□ -1.62
TNFSF4-201ENST00000281834 SIRT7Q9NRC8 400 aa4.95□□□□□ -1.62
TNFSF4-201ENST00000281834 TET2Q6N021 2002 aaPredicted RBP4.95□□□□□ -1.62
TNFSF4-201ENST00000281834 CFAP46Q8IYW2 2715 aa4.95□□□□□ -1.62
TNFSF4-201ENST00000281834 TLN2Q9Y4G6 2542 aa4.95□□□□□ -1.62
TNFSF4-201ENST00000281834 HRNRQ86YZ3 2850 aaPredicted RBP4.95□□□□□ -1.62
TNFSF4-201ENST00000281834 LOC102723971A0A1B0GUV8 181 aa4.95□□□□□ -1.62
TNFSF4-201ENST00000281834 PGPEP1LA6NFU8 196 aa4.95□□□□□ -1.62
TNFSF4-201ENST00000281834 ZNF729A6NN14 1252 aaPredicted RBP4.95□□□□□ -1.62
TNFSF4-201ENST00000281834 PPIHO43447 177 aaKnown RBP4.95□□□□□ -1.62
TNFSF4-201ENST00000281834 SLC25A17O43808 307 aa4.95□□□□□ -1.62
TNFSF4-201ENST00000281834 HRASP01112 189 aa4.95□□□□□ -1.62
TNFSF4-201ENST00000281834 APOA2P02652 100 aa4.95□□□□□ -1.62
TNFSF4-201ENST00000281834 P0C879 139 aa4.95□□□□□ -1.62
TNFSF4-201ENST00000281834 PRB4P10163 310 aaPredicted RBP4.95□□□□□ -1.62
TNFSF4-201ENST00000281834 PSMB3P49720 205 aa4.95□□□□□ -1.62
TNFSF4-201ENST00000281834 THBS3P49746 956 aa4.95□□□□□ -1.62
TNFSF4-201ENST00000281834 RAB13P51153 203 aa4.95□□□□□ -1.62
TNFSF4-201ENST00000281834 RAB5BP61020 215 aa4.95□□□□□ -1.62
TNFSF4-201ENST00000281834 SERF2P84101 59 aa4.95□□□□□ -1.62
TNFSF4-201ENST00000281834 SLC24A4Q8NFF2 622 aa4.95□□□□□ -1.62
TNFSF4-201ENST00000281834 TVP23CQ96ET8 276 aa4.95□□□□□ -1.62
TNFSF4-201ENST00000281834 SSX3Q99909 188 aa4.95□□□□□ -1.62
TNFSF4-201ENST00000281834 ZNF251Q9BRH9 671 aa4.95□□□□□ -1.62
TNFSF4-201ENST00000281834 ACTR3CQ9C0K3 210 aaPredicted RBP4.95□□□□□ -1.62
TNFSF4-201ENST00000281834 ONECUT1Q9UBC0 465 aa4.95□□□□□ -1.62
TNFSF4-201ENST00000281834 TGIF2-C20orf24A0A0A6YYL0 155 aa4.94□□□□□ -1.62
TNFSF4-201ENST00000281834 BTBD17A6NE02 478 aa4.94□□□□□ -1.62
TNFSF4-201ENST00000281834 C17orf112F2Z3M2 114 aa4.94□□□□□ -1.62
TNFSF4-201ENST00000281834 IFNA1P01562 189 aa4.94□□□□□ -1.62
TNFSF4-201ENST00000281834 APOBEC3AP31941 199 aaPredicted RBP4.94□□□□□ -1.62
TNFSF4-201ENST00000281834 B2MP61769 119 aa4.94□□□□□ -1.62
TNFSF4-201ENST00000281834 ZNF506Q5JVG8 444 aa4.94□□□□□ -1.62
TNFSF4-201ENST00000281834 WDR25Q64LD2 544 aaPredicted RBP4.94□□□□□ -1.62
TNFSF4-201ENST00000281834 HCP5Q6MZN7 132 aa4.94□□□□□ -1.62
TNFSF4-201ENST00000281834 TREML4Q6UXN2 200 aa4.94□□□□□ -1.62
TNFSF4-201ENST00000281834 RAB9BQ9NP90 201 aa4.94□□□□□ -1.62
TNFSF4-201ENST00000281834 LINC00312Q9Y6C7 94 aa4.94□□□□□ -1.62
TNFSF4-201ENST00000281834 PXMP4Q9Y6I8 212 aa4.94□□□□□ -1.62
TNFSF4-201ENST00000281834 USP9XQ93008 2570 aaPredicted RBP4.94□□□□□ -1.62
TNFSF4-201ENST00000281834 RAI1Q7Z5J4 1906 aaPredicted RBP4.94□□□□□ -1.62
TNFSF4-201ENST00000281834 C15orf61A6NNL5 157 aa4.94□□□□□ -1.62
TNFSF4-201ENST00000281834 CYB5BO43169 146 aa4.94□□□□□ -1.62
TNFSF4-201ENST00000281834 CGB3P0DN86 165 aa4.94□□□□□ -1.62
TNFSF4-201ENST00000281834 CGB7P0DN87 165 aa4.94□□□□□ -1.62
TNFSF4-201ENST00000281834 IGFBP2P18065 325 aa4.94□□□□□ -1.62
TNFSF4-201ENST00000281834 RAB5AP20339 215 aa4.94□□□□□ -1.62
TNFSF4-201ENST00000281834 ATP5G3P48201 142 aa4.94□□□□□ -1.62
TNFSF4-201ENST00000281834 LGALS4P56470 323 aa4.94□□□□□ -1.62
TNFSF4-201ENST00000281834 HSPE1P61604 102 aaKnown RBP4.94□□□□□ -1.62
TNFSF4-201ENST00000281834 FLI1Q01543 452 aaPredicted RBP4.94□□□□□ -1.62
TNFSF4-201ENST00000281834 KHDC3LQ587J8 217 aa4.94□□□□□ -1.62
TNFSF4-201ENST00000281834 SPATA31B1PQ5VZV4 182 aa4.94□□□□□ -1.62
TNFSF4-201ENST00000281834 TGIF2LXQ8IUE1 241 aa4.94□□□□□ -1.62
TNFSF4-201ENST00000281834 DMRTC2Q8IXT2 367 aaPredicted RBP4.94□□□□□ -1.62
TNFSF4-201ENST00000281834 OR10A7Q8NGE5 316 aa4.94□□□□□ -1.62
TNFSF4-201ENST00000281834 TMEM170AQ8WVE7 144 aa4.94□□□□□ -1.62
TNFSF4-201ENST00000281834 CREBBPQ92793 2442 aa4.94□□□□□ -1.62
TNFSF4-201ENST00000281834 CTXND1A0A1B0GTU2 59 aa4.93□□□□□ -1.62
TNFSF4-201ENST00000281834 PMS2P5A8MQ11 134 aa4.93□□□□□ -1.62
TNFSF4-201ENST00000281834 SIAH2O43255 324 aa4.93□□□□□ -1.62
TNFSF4-201ENST00000281834 NDUFS7O75251 213 aa4.93□□□□□ -1.62
TNFSF4-201ENST00000281834 ARF6P62330 175 aa4.93□□□□□ -1.62
TNFSF4-201ENST00000281834 MEF2BQ02080 365 aaPredicted RBP4.93□□□□□ -1.62
TNFSF4-201ENST00000281834 C21orf62-AS1Q17RA5 79 aa4.93□□□□□ -1.62
TNFSF4-201ENST00000281834 NCMAPQ5T1S8 102 aa4.93□□□□□ -1.62
TNFSF4-201ENST00000281834 RBMS3Q6XE24 437 aaKnown RBP4.93□□□□□ -1.62
TNFSF4-201ENST00000281834 ABHD5Q8WTS1 349 aa4.93□□□□□ -1.62
TNFSF4-201ENST00000281834 FAM222BQ8WU58 562 aa4.93□□□□□ -1.62
TNFSF4-201ENST00000281834 FLYWCH2Q96CP2 140 aaKnown RBP4.93□□□□□ -1.62
TNFSF4-201ENST00000281834 RITA1Q96K30 269 aa4.93□□□□□ -1.62
TNFSF4-201ENST00000281834 PSMG3Q9BT73 122 aaPredicted RBP4.93□□□□□ -1.62
TNFSF4-201ENST00000281834 DERL1Q9BUN8 251 aa4.93□□□□□ -1.62
TNFSF4-201ENST00000281834 TPSG1Q9NRR2 321 aa4.93□□□□□ -1.62
TNFSF4-201ENST00000281834 VAX2Q9UIW0 290 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms