RNA–Protein interactions for RNA: ENST00000277549.9

CACNA1B-201, Transcript of calcium voltage-gated channel subunit alpha1 B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1B, Length 7,158 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1B-201ENST00000277549 KCNE5Q9UJ90 142 aa17.23■□□□□ 0.35
CACNA1B-201ENST00000277549 SCN9AQ15858 1988 aa17.23■□□□□ 0.35
CACNA1B-201ENST00000277549 DPM3Q9P2X0 92 aa17.23■□□□□ 0.35
CACNA1B-201ENST00000277549 PCM1Q15154 2024 aa17.23■□□□□ 0.35
CACNA1B-201ENST00000277549 H7C1H1 209 aa17.23■□□□□ 0.35
CACNA1B-201ENST00000277549 APCDD1LQ8NCL9 501 aa17.23■□□□□ 0.35
CACNA1B-201ENST00000277549 MSGN1A6NI15 193 aa17.23■□□□□ 0.35
CACNA1B-201ENST00000277549 PRSS53Q2L4Q9 553 aa17.23■□□□□ 0.35
CACNA1B-201ENST00000277549 FAM57AQ8TBR7 257 aa17.23■□□□□ 0.35
CACNA1B-201ENST00000277549 KCNS1Q96KK3 526 aa17.23■□□□□ 0.35
CACNA1B-201ENST00000277549 NEU4Q8WWR8 484 aaPredicted RBP17.23■□□□□ 0.35
CACNA1B-201ENST00000277549 H1FOOQ8IZA3 346 aaPredicted RBP17.22■□□□□ 0.35
CACNA1B-201ENST00000277549 IGFBP2P18065 325 aa17.22■□□□□ 0.35
CACNA1B-201ENST00000277549 EVI2AP22794 236 aa17.22■□□□□ 0.35
CACNA1B-201ENST00000277549 RGPD4Q7Z3J3 1758 aa17.22■□□□□ 0.35
CACNA1B-201ENST00000277549 LRTM2Q8N967 370 aa17.22■□□□□ 0.35
CACNA1B-201ENST00000277549 DMRTA1Q5VZB9 504 aa17.22■□□□□ 0.35
CACNA1B-201ENST00000277549 COL25A1Q9BXS0 654 aaPredicted RBP17.22■□□□□ 0.35
CACNA1B-201ENST00000277549 NPIPB8E9PQR5 432 aa17.22■□□□□ 0.35
CACNA1B-201ENST00000277549 NPIPB9F8W1W9 429 aa17.22■□□□□ 0.35
CACNA1B-201ENST00000277549 NPIPB7O75200 414 aa17.22■□□□□ 0.35
CACNA1B-201ENST00000277549 HMGA2P52926 109 aa17.22■□□□□ 0.35
CACNA1B-201ENST00000277549 SPSB2Q99619 263 aa17.22■□□□□ 0.35
CACNA1B-201ENST00000277549 HOXA5P20719 270 aa17.21■□□□□ 0.35
CACNA1B-201ENST00000277549 TMEM91Q6ZNR0 172 aa17.21■□□□□ 0.35
CACNA1B-201ENST00000277549 TMEM105Q8N8V8 129 aa17.21■□□□□ 0.35
CACNA1B-201ENST00000277549 GNG5P63218 68 aa17.21■□□□□ 0.35
CACNA1B-201ENST00000277549 ZNF146Q15072 292 aa17.21■□□□□ 0.35
CACNA1B-201ENST00000277549 CENPWQ5EE01 88 aa17.21■□□□□ 0.35
CACNA1B-201ENST00000277549 OR10J3Q5JRS4 329 aa17.21■□□□□ 0.35
CACNA1B-201ENST00000277549 CRIM1Q9NZV1 1036 aa17.21■□□□□ 0.35
CACNA1B-201ENST00000277549 CGAP01215 116 aa17.21■□□□□ 0.35
CACNA1B-201ENST00000277549 MARVELD1Q9BSK0 173 aa17.21■□□□□ 0.35
CACNA1B-201ENST00000277549 C21orf62Q9NYP8 219 aa17.21■□□□□ 0.35
CACNA1B-201ENST00000277549 MRAPQ8TCY5 172 aa17.21■□□□□ 0.35
CACNA1B-201ENST00000277549 TXNDC17Q9BRA2 123 aa17.21■□□□□ 0.35
CACNA1B-201ENST00000277549 TNFSF18Q9UNG2 199 aa17.21■□□□□ 0.35
CACNA1B-201ENST00000277549 TFF3Q07654 80 aa17.2■□□□□ 0.34
CACNA1B-201ENST00000277549 KLF4O43474 513 aa17.2■□□□□ 0.34
CACNA1B-201ENST00000277549 ACP7Q6ZNF0 438 aa17.2■□□□□ 0.34
CACNA1B-201ENST00000277549 LURAP1LQ8IV03 231 aa17.2■□□□□ 0.34
CACNA1B-201ENST00000277549 SEC11BP0C7V7 166 aa17.2■□□□□ 0.34
CACNA1B-201ENST00000277549 CEACAM1P13688 526 aa17.2■□□□□ 0.34
CACNA1B-201ENST00000277549 OR11H4Q8NGC9 324 aa17.2■□□□□ 0.34
CACNA1B-201ENST00000277549 IGKV1D-42A0A075B6H8 117 aa17.2■□□□□ 0.34
CACNA1B-201ENST00000277549 GLI3P10071 1580 aa17.2■□□□□ 0.34
CACNA1B-201ENST00000277549 NGFRP08138 427 aa17.2■□□□□ 0.34
CACNA1B-201ENST00000277549 OR5A1Q8NGJ0 315 aa17.2■□□□□ 0.34
CACNA1B-201ENST00000277549 OR5P3Q8WZ94 311 aa17.2■□□□□ 0.34
CACNA1B-201ENST00000277549 CST9LQ9H4G1 147 aa17.2■□□□□ 0.34
CACNA1B-201ENST00000277549 RPRMQ9NS64 109 aa17.2■□□□□ 0.34
CACNA1B-201ENST00000277549 IL6RP08887 468 aaPredicted RBP17.19■□□□□ 0.34
CACNA1B-201ENST00000277549 RTN4RL2Q86UN3 420 aa17.19■□□□□ 0.34
CACNA1B-201ENST00000277549 C9orf106Q8NAJ2 232 aa17.19■□□□□ 0.34
CACNA1B-201ENST00000277549 RAMP1O60894 148 aa17.19■□□□□ 0.34
CACNA1B-201ENST00000277549 APOHP02749 345 aaPredicted RBP17.19■□□□□ 0.34
CACNA1B-201ENST00000277549 CGB3P0DN86 165 aa17.19■□□□□ 0.34
CACNA1B-201ENST00000277549 IGHV1-2P23083 117 aa17.19■□□□□ 0.34
CACNA1B-201ENST00000277549 PKIAP61925 76 aa17.19■□□□□ 0.34
CACNA1B-201ENST00000277549 PSMG4Q5JS54 123 aa17.19■□□□□ 0.34
CACNA1B-201ENST00000277549 ADARB2-AS1A8MUL3 147 aa17.19■□□□□ 0.34
CACNA1B-201ENST00000277549 SLC17A3O00476 420 aa17.19■□□□□ 0.34
CACNA1B-201ENST00000277549 C1QTNF9BB2RNN3 333 aa17.19■□□□□ 0.34
CACNA1B-201ENST00000277549 Q6ZT83 130 aa17.19■□□□□ 0.34
CACNA1B-201ENST00000277549 TTC9CQ8N5M4 171 aa17.18■□□□□ 0.34
CACNA1B-201ENST00000277549 KLRD1Q13241 179 aa17.18■□□□□ 0.34
CACNA1B-201ENST00000277549 C4orf51C9J302 202 aa17.18■□□□□ 0.34
CACNA1B-201ENST00000277549 PET117Q6UWS5 81 aa17.18■□□□□ 0.34
CACNA1B-201ENST00000277549 ABCA3Q99758 1704 aa17.18■□□□□ 0.34
CACNA1B-201ENST00000277549 VENTXO95231 258 aa17.18■□□□□ 0.34
CACNA1B-201ENST00000277549 SPACA3Q8IXA5 215 aa17.18■□□□□ 0.34
CACNA1B-201ENST00000277549 SMIM13P0DJ93 91 aa17.18■□□□□ 0.34
CACNA1B-201ENST00000277549 FOLR2P14207 255 aa17.18■□□□□ 0.34
CACNA1B-201ENST00000277549 S100A7L2Q5SY68 101 aa17.18■□□□□ 0.34
CACNA1B-201ENST00000277549 BRD3OSQ6XYD6 125 aa17.17■□□□□ 0.34
CACNA1B-201ENST00000277549 IGHV2OR16-5A0A0B4J2B6 119 aa17.17■□□□□ 0.34
CACNA1B-201ENST00000277549 ATP5LO75964 103 aa17.17■□□□□ 0.34
CACNA1B-201ENST00000277549 THBDP07204 575 aa17.17■□□□□ 0.34
CACNA1B-201ENST00000277549 ZNF250P15622 560 aa17.17■□□□□ 0.34
CACNA1B-201ENST00000277549 UBE2E2Q96LR5 201 aa17.17■□□□□ 0.34
CACNA1B-201ENST00000277549 TDRD6O60522 2096 aaKnown RBP17.17■□□□□ 0.34
CACNA1B-201ENST00000277549 LEPP41159 167 aa17.17■□□□□ 0.34
CACNA1B-201ENST00000277549 WFDC6Q9BQY6 131 aa17.17■□□□□ 0.34
CACNA1B-201ENST00000277549 TRPM6Q9BX84 2022 aa17.17■□□□□ 0.34
CACNA1B-201ENST00000277549 ZIC4Q8N9L1 334 aa17.17■□□□□ 0.34
CACNA1B-201ENST00000277549 SLC25A28Q96A46 364 aa17.17■□□□□ 0.34
CACNA1B-201ENST00000277549 LINC00158P58513 81 aa17.17■□□□□ 0.34
CACNA1B-201ENST00000277549 FAM181AQ8N9Y4 354 aa17.17■□□□□ 0.34
CACNA1B-201ENST00000277549 CXorf65A6NEN9 183 aa17.17■□□□□ 0.34
CACNA1B-201ENST00000277549 TIMM23BQ5SRD1 257 aa17.17■□□□□ 0.34
CACNA1B-201ENST00000277549 FOXD3Q9UJU5 478 aaPredicted RBP17.17■□□□□ 0.34
CACNA1B-201ENST00000277549 GCHFRP30047 84 aa17.16■□□□□ 0.34
CACNA1B-201ENST00000277549 ZNF414Q96IQ9 312 aa17.16■□□□□ 0.34
CACNA1B-201ENST00000277549 NHSQ6T4R5 1651 aa17.16■□□□□ 0.34
CACNA1B-201ENST00000277549 FHITP49789 147 aa17.16■□□□□ 0.34
CACNA1B-201ENST00000277549 PKIBQ9C010 78 aa17.16■□□□□ 0.34
CACNA1B-201ENST00000277549 PILRAQ9UKJ1 303 aa17.16■□□□□ 0.34
CACNA1B-201ENST00000277549 C7orf66A4D0T2 115 aa17.16■□□□□ 0.34
CACNA1B-201ENST00000277549 C9orf62Q8N4C0 152 aa17.16■□□□□ 0.34
CACNA1B-201ENST00000277549 PARD6GQ9BYG4 376 aaPredicted RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms