RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 NHP2Q9NX24 153 aaKnown RBP7.4□□□□□ -1.22
SCUBE3-201ENST00000274938 A0A1W2PRS3 328 aa7.4□□□□□ -1.22
SCUBE3-201ENST00000274938 C9orf172C9J069 976 aa7.4□□□□□ -1.22
SCUBE3-201ENST00000274938 CCL20P78556 96 aa7.4□□□□□ -1.22
SCUBE3-201ENST00000274938 PNKDQ8N490 385 aa7.4□□□□□ -1.22
SCUBE3-201ENST00000274938 SLC25A15Q9Y619 301 aa7.4□□□□□ -1.22
SCUBE3-201ENST00000274938 OR9G4Q8NGQ1 327 aa7.4□□□□□ -1.22
SCUBE3-201ENST00000274938 OR52E5Q8NH55 327 aa7.4□□□□□ -1.22
SCUBE3-201ENST00000274938 NXT2Q9NPJ8 142 aaKnown RBP7.4□□□□□ -1.22
SCUBE3-201ENST00000274938 SEMA5BQ9P283 1151 aa7.4□□□□□ -1.22
SCUBE3-201ENST00000274938 MYH14Q7Z406 1995 aaKnown RBP7.4□□□□□ -1.23
SCUBE3-201ENST00000274938 RNF222A6NCQ9 220 aa7.4□□□□□ -1.23
SCUBE3-201ENST00000274938 MOSP00540 346 aa7.4□□□□□ -1.23
SCUBE3-201ENST00000274938 LEPP41159 167 aa7.4□□□□□ -1.23
SCUBE3-201ENST00000274938 RIPPLY3P57055 190 aa7.4□□□□□ -1.23
SCUBE3-201ENST00000274938 PLAURQ03405 335 aa7.4□□□□□ -1.23
SCUBE3-201ENST00000274938 ATXN8Q156A1 80 aa7.4□□□□□ -1.23
SCUBE3-201ENST00000274938 FAM71F2Q6NXP2 309 aa7.4□□□□□ -1.23
SCUBE3-201ENST00000274938 C9orf50Q5SZB4 431 aa7.4□□□□□ -1.23
SCUBE3-201ENST00000274938 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.4□□□□□ -1.23
SCUBE3-201ENST00000274938 PMS2CLQ68D20 193 aa7.4□□□□□ -1.23
SCUBE3-201ENST00000274938 OR5AN1Q8NGI8 311 aa7.4□□□□□ -1.23
SCUBE3-201ENST00000274938 PDE4DIPQ5VU43 2346 aa7.39□□□□□ -1.23
SCUBE3-201ENST00000274938 DDX60Q8IY21 1712 aaKnown RBP7.39□□□□□ -1.23
SCUBE3-201ENST00000274938 IGKV3OR2-268A0A0C4DH90 116 aa7.39□□□□□ -1.23
SCUBE3-201ENST00000274938 MSGN1A6NI15 193 aa7.39□□□□□ -1.23
SCUBE3-201ENST00000274938 ATXN7O15265 892 aaPredicted RBP7.39□□□□□ -1.23
SCUBE3-201ENST00000274938 TGIF1Q15583 401 aa7.39□□□□□ -1.23
SCUBE3-201ENST00000274938 ZNF585BQ52M93 769 aa7.39□□□□□ -1.23
SCUBE3-201ENST00000274938 ZNF525Q8N782 197 aa7.39□□□□□ -1.23
SCUBE3-201ENST00000274938 RPP25Q9BUL9 199 aaKnown RBP7.39□□□□□ -1.23
SCUBE3-201ENST00000274938 M0R381 172 aa7.39□□□□□ -1.23
SCUBE3-201ENST00000274938 CCL21O00585 134 aa7.39□□□□□ -1.23
SCUBE3-201ENST00000274938 TM4SF5O14894 197 aa7.39□□□□□ -1.23
SCUBE3-201ENST00000274938 GAGE2BQ13066 116 aa7.39□□□□□ -1.23
SCUBE3-201ENST00000274938 GAGE2EQ4V326 116 aa7.39□□□□□ -1.23
SCUBE3-201ENST00000274938 KLF14Q8TD94 323 aaPredicted RBP7.39□□□□□ -1.23
SCUBE3-201ENST00000274938 ZNF479Q96JC4 524 aa7.39□□□□□ -1.23
SCUBE3-201ENST00000274938 NRTNQ99748 197 aa7.39□□□□□ -1.23
SCUBE3-201ENST00000274938 GNB1LQ9BYB4 327 aa7.39□□□□□ -1.23
SCUBE3-201ENST00000274938 GAGE2DQ9UEU5 116 aa7.39□□□□□ -1.23
SCUBE3-201ENST00000274938 ORMDL2Q53FV1 153 aa7.39□□□□□ -1.23
SCUBE3-201ENST00000274938 ZFAND6Q6FIF0 208 aa7.39□□□□□ -1.23
SCUBE3-201ENST00000274938 ASCL2Q99929 193 aa7.39□□□□□ -1.23
SCUBE3-201ENST00000274938 FNDC4Q9H6D8 234 aaPredicted RBP7.39□□□□□ -1.23
SCUBE3-201ENST00000274938 NDUFA3O95167 84 aa7.39□□□□□ -1.23
SCUBE3-201ENST00000274938 ATP5G3P48201 142 aa7.39□□□□□ -1.23
SCUBE3-201ENST00000274938 SRSF1Q07955 248 aaKnown RBP eCLIP7.39□□□□□ -1.23
SCUBE3-201ENST00000274938 GAGE13Q4V321 117 aa7.39□□□□□ -1.23
SCUBE3-201ENST00000274938 PIMREGQ9BSJ6 248 aa7.39□□□□□ -1.23
SCUBE3-201ENST00000274938 TMEM242Q9NWH2 141 aa7.39□□□□□ -1.23
SCUBE3-201ENST00000274938 RTN4RL2Q86UN3 420 aa7.39□□□□□ -1.23
SCUBE3-201ENST00000274938 RNF182Q8N6D2 247 aa7.39□□□□□ -1.23
SCUBE3-201ENST00000274938 NPFFR1Q9GZQ6 430 aa7.39□□□□□ -1.23
SCUBE3-201ENST00000274938 CACNA1SQ13698 1873 aa7.39□□□□□ -1.23
SCUBE3-201ENST00000274938 C9JCJ5 164 aa7.38□□□□□ -1.23
SCUBE3-201ENST00000274938 SPINT1O43278 529 aa7.38□□□□□ -1.23
SCUBE3-201ENST00000274938 IGFBP2P18065 325 aa7.38□□□□□ -1.23
SCUBE3-201ENST00000274938 CTSSP25774 331 aa7.38□□□□□ -1.23
SCUBE3-201ENST00000274938 PLNP26678 52 aa7.38□□□□□ -1.23
SCUBE3-201ENST00000274938 LDLRAD2Q5SZI1 272 aa7.38□□□□□ -1.23
SCUBE3-201ENST00000274938 REG1AP05451 166 aa7.38□□□□□ -1.23
SCUBE3-201ENST00000274938 ADMP35318 185 aa7.38□□□□□ -1.23
SCUBE3-201ENST00000274938 IFI27P40305 119 aaPredicted RBP7.38□□□□□ -1.23
SCUBE3-201ENST00000274938 TFF3Q07654 80 aa7.38□□□□□ -1.23
SCUBE3-201ENST00000274938 SRSF6Q13247 344 aaKnown RBP7.38□□□□□ -1.23
SCUBE3-201ENST00000274938 ATP5L2Q7Z4Y8 100 aa7.38□□□□□ -1.23
SCUBE3-201ENST00000274938 FAM19A2Q8N3H0 131 aa7.38□□□□□ -1.23
SCUBE3-201ENST00000274938 LOC105371242A0A075B767 164 aa7.38□□□□□ -1.23
SCUBE3-201ENST00000274938 A0A1B0GTI1 187 aa7.38□□□□□ -1.23
SCUBE3-201ENST00000274938 NKX2-8O15522 239 aa7.38□□□□□ -1.23
SCUBE3-201ENST00000274938 FGF16O43320 207 aa7.38□□□□□ -1.23
SCUBE3-201ENST00000274938 TNFSF13O75888 250 aa7.38□□□□□ -1.23
SCUBE3-201ENST00000274938 ITGBL1O95965 494 aaPredicted RBP7.38□□□□□ -1.23
SCUBE3-201ENST00000274938 ZNF638Q14966 1978 aaKnown RBP7.38□□□□□ -1.23
SCUBE3-201ENST00000274938 IGKV1D-42A0A075B6H8 117 aa7.38□□□□□ -1.23
SCUBE3-201ENST00000274938 ZIC3O60481 467 aa7.38□□□□□ -1.23
SCUBE3-201ENST00000274938 LAIR2Q6ISS4 152 aa7.38□□□□□ -1.23
SCUBE3-201ENST00000274938 DMRTA2Q96SC8 542 aa7.38□□□□□ -1.23
SCUBE3-201ENST00000274938 ERVK11-1P61568 191 aa7.38□□□□□ -1.23
SCUBE3-201ENST00000274938 SLC50A1Q9BRV3 221 aa7.38□□□□□ -1.23
SCUBE3-201ENST00000274938 GP6Q9HCN6 339 aa7.38□□□□□ -1.23
SCUBE3-201ENST00000274938 COL22A1Q8NFW1 1626 aaPredicted RBP7.38□□□□□ -1.23
SCUBE3-201ENST00000274938 PKD1L3Q7Z443 1732 aa7.38□□□□□ -1.23
SCUBE3-201ENST00000274938 HIGD1CA8MV81 97 aa7.38□□□□□ -1.23
SCUBE3-201ENST00000274938 RAMP1O60894 148 aa7.38□□□□□ -1.23
SCUBE3-201ENST00000274938 PLPPR1Q8TBJ4 325 aa7.38□□□□□ -1.23
SCUBE3-201ENST00000274938 F8VVB4 439 aa7.37□□□□□ -1.23
SCUBE3-201ENST00000274938 F8VWA3 439 aa7.37□□□□□ -1.23
SCUBE3-201ENST00000274938 IGLV3-21P80748 117 aaPredicted RBP7.37□□□□□ -1.23
SCUBE3-201ENST00000274938 S100A7L2Q5SY68 101 aa7.37□□□□□ -1.23
SCUBE3-201ENST00000274938 FHL5Q5TD97 284 aa7.37□□□□□ -1.23
SCUBE3-201ENST00000274938 C1orf53Q5VUE5 145 aa7.37□□□□□ -1.23
SCUBE3-201ENST00000274938 FAM90A1Q86YD7 464 aa7.37□□□□□ -1.23
SCUBE3-201ENST00000274938 PHLDA1Q8WV24 401 aaPredicted RBP7.37□□□□□ -1.23
SCUBE3-201ENST00000274938 DPH3Q96FX2 82 aa7.37□□□□□ -1.23
SCUBE3-201ENST00000274938 MGST2Q99735 147 aa7.37□□□□□ -1.23
SCUBE3-201ENST00000274938 RTBDNQ9BSG5 229 aaPredicted RBP7.37□□□□□ -1.23
SCUBE3-201ENST00000274938 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.37□□□□□ -1.23
SCUBE3-201ENST00000274938 A0A0G2JLM5 398 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms