RNA–Protein interactions for RNA: ENST00000269137.11

SS18-201, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SS18, Length 1,836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-201ENST00000269137 UBAC2Q8NBM4 344 aa11.35□□□□□ -0.59
SS18-201ENST00000269137 ZDHHC16Q969W1 377 aa11.35□□□□□ -0.59
SS18-201ENST00000269137 MALSU1Q96EH3 234 aa11.35□□□□□ -0.59
SS18-201ENST00000269137 RITA1Q96K30 269 aa11.35□□□□□ -0.59
SS18-201ENST00000269137 TSNAXQ99598 290 aaKnown RBP11.35□□□□□ -0.59
SS18-201ENST00000269137 WFDC1Q9HC57 220 aa11.35□□□□□ -0.59
SS18-201ENST00000269137 NUP50Q9UKX7 468 aa11.35□□□□□ -0.59
SS18-201ENST00000269137 OR51B2Q9Y5P1 312 aa11.35□□□□□ -0.59
SS18-201ENST00000269137 UNC79Q9P2D8 2635 aa11.35□□□□□ -0.59
SS18-201ENST00000269137 TRAV20A0A0B4J274 112 aa11.35□□□□□ -0.59
SS18-201ENST00000269137 I3L521 148 aa11.35□□□□□ -0.59
SS18-201ENST00000269137 CST7O76096 145 aa11.35□□□□□ -0.59
SS18-201ENST00000269137 VENTXO95231 258 aa11.35□□□□□ -0.59
SS18-201ENST00000269137 GATA3P23771 443 aa11.35□□□□□ -0.59
SS18-201ENST00000269137 VDAC2P45880 294 aaPredicted RBP11.35□□□□□ -0.59
SS18-201ENST00000269137 SPANXN5Q5MJ07 72 aa11.35□□□□□ -0.59
SS18-201ENST00000269137 Q5PR19 223 aa11.35□□□□□ -0.59
SS18-201ENST00000269137 STPG2Q8N412 459 aa11.35□□□□□ -0.59
SS18-201ENST00000269137 OR5B3Q8NH48 314 aa11.35□□□□□ -0.59
SS18-201ENST00000269137 REG4Q9BYZ8 158 aa11.35□□□□□ -0.59
SS18-201ENST00000269137 SMIM3Q9BZL3 60 aa11.35□□□□□ -0.59
SS18-201ENST00000269137 CENPVL3A0A0U1RRI6 287 aa11.34□□□□□ -0.59
SS18-201ENST00000269137 CRYGBP07316 175 aa11.34□□□□□ -0.59
SS18-201ENST00000269137 RPL8P62917 257 aaKnown RBP11.34□□□□□ -0.59
SS18-201ENST00000269137 SSX2Q16385 188 aa11.34□□□□□ -0.59
SS18-201ENST00000269137 LINC01356Q8N9X3 169 aa11.34□□□□□ -0.59
SS18-201ENST00000269137 AJUBAQ96IF1 538 aa11.34□□□□□ -0.59
SS18-201ENST00000269137 CXorf58Q96LI9 332 aa11.34□□□□□ -0.59
SS18-201ENST00000269137 CLCC1Q96S66 551 aa11.34□□□□□ -0.59
SS18-201ENST00000269137 ARV1Q9H2C2 271 aa11.34□□□□□ -0.59
SS18-201ENST00000269137 STRAPQ9Y3F4 350 aaKnown RBP11.34□□□□□ -0.59
SS18-201ENST00000269137 BORCS7-ASMTA0A0B4J1R7 106 aa11.33□□□□□ -0.6
SS18-201ENST00000269137 NPFFO15130 113 aa11.33□□□□□ -0.6
SS18-201ENST00000269137 SLC25A17O43808 307 aa11.33□□□□□ -0.6
SS18-201ENST00000269137 DYNLT3P51808 116 aa11.33□□□□□ -0.6
SS18-201ENST00000269137 PRCDQ00LT1 54 aa11.33□□□□□ -0.6
SS18-201ENST00000269137 PSG5Q15238 335 aa11.33□□□□□ -0.6
SS18-201ENST00000269137 SPINK9Q5DT21 86 aa11.33□□□□□ -0.6
SS18-201ENST00000269137 CCDC28AQ8IWP9 274 aa11.33□□□□□ -0.6
SS18-201ENST00000269137 DYNAPQ8N1N2 210 aa11.33□□□□□ -0.6
SS18-201ENST00000269137 OR1S2Q8NGQ3 325 aa11.33□□□□□ -0.6
SS18-201ENST00000269137 OR5C1Q8NGR4 320 aa11.33□□□□□ -0.6
SS18-201ENST00000269137 OR4C12Q96R67 309 aa11.33□□□□□ -0.6
SS18-201ENST00000269137 SLC25A32Q9H2D1 315 aa11.33□□□□□ -0.6
SS18-201ENST00000269137 HIPK2Q9H2X6 1198 aa11.33□□□□□ -0.6
SS18-201ENST00000269137 TEX50A0A1B0GTY4 177 aa11.32□□□□□ -0.6
SS18-201ENST00000269137 MFSD2BA6NFX1 497 aa11.32□□□□□ -0.6
SS18-201ENST00000269137 METTL15P1P0C7V9 234 aa11.32□□□□□ -0.6
SS18-201ENST00000269137 SAA4P35542 130 aa11.32□□□□□ -0.6
SS18-201ENST00000269137 HBG1P69891 147 aa11.32□□□□□ -0.6
SS18-201ENST00000269137 HBG2P69892 147 aa11.32□□□□□ -0.6
SS18-201ENST00000269137 RPP30P78346 268 aaKnown RBP11.32□□□□□ -0.6
SS18-201ENST00000269137 TMEM267Q0VDI3 215 aaPredicted RBP11.32□□□□□ -0.6
SS18-201ENST00000269137 ZNF266Q14584 549 aa11.32□□□□□ -0.6
SS18-201ENST00000269137 TMEM217Q8N7C4 229 aa11.32□□□□□ -0.6
SS18-201ENST00000269137 OR1L8Q8NGR8 309 aa11.32□□□□□ -0.6
SS18-201ENST00000269137 C17orf50Q8WW18 174 aa11.32□□□□□ -0.6
SS18-201ENST00000269137 ZNF430Q9H8G1 570 aaPredicted RBP11.32□□□□□ -0.6
SS18-201ENST00000269137 HEYLQ9NQ87 328 aaPredicted RBP11.32□□□□□ -0.6
SS18-201ENST00000269137 HIF1ANQ9NWT6 349 aa11.32□□□□□ -0.6
SS18-201ENST00000269137 PFDN2Q9UHV9 154 aa11.32□□□□□ -0.6
SS18-201ENST00000269137 SCAF4O95104 1147 aaKnown RBP11.32□□□□□ -0.6
SS18-201ENST00000269137 MOSP00540 346 aa11.32□□□□□ -0.6
SS18-201ENST00000269137 EBI3Q14213 229 aa11.32□□□□□ -0.6
SS18-201ENST00000269137 CLINT1Q14677 625 aa11.32□□□□□ -0.6
SS18-201ENST00000269137 MRGPRG-AS1Q2M3A8 158 aa11.32□□□□□ -0.6
SS18-201ENST00000269137 HAPLN4Q86UW8 402 aa11.32□□□□□ -0.6
SS18-201ENST00000269137 THNSL2Q86YJ6 484 aa11.32□□□□□ -0.6
SS18-201ENST00000269137 KRTAP1-3Q8IUG1 177 aa11.32□□□□□ -0.6
SS18-201ENST00000269137 COMMD5Q9GZQ3 224 aa11.32□□□□□ -0.6
SS18-201ENST00000269137 C7orf69Q9H7B7 122 aa11.32□□□□□ -0.6
SS18-201ENST00000269137 SIGLEC9Q9Y336 463 aa11.32□□□□□ -0.6
SS18-201ENST00000269137 ITPR2Q14571 2701 aa11.32□□□□□ -0.6
SS18-201ENST00000269137 IGHV1-69DA0A0B4J2H0 117 aa11.31□□□□□ -0.6
SS18-201ENST00000269137 C15orf62A8K5M9 175 aa11.31□□□□□ -0.6
SS18-201ENST00000269137 RNF223E7ERA6 249 aa11.31□□□□□ -0.6
SS18-201ENST00000269137 INS-IGF2F8WCM5 200 aa11.31□□□□□ -0.6
SS18-201ENST00000269137 DFFBO76075 338 aa11.31□□□□□ -0.6
SS18-201ENST00000269137 IGHV1-69P01742 117 aa11.31□□□□□ -0.6
SS18-201ENST00000269137 MYOD1P15172 320 aa11.31□□□□□ -0.6
SS18-201ENST00000269137 HOXA1P49639 335 aaPredicted RBP11.31□□□□□ -0.6
SS18-201ENST00000269137 ARL16Q0P5N6 197 aa11.31□□□□□ -0.6
SS18-201ENST00000269137 PRSS8Q16651 343 aa11.31□□□□□ -0.6
SS18-201ENST00000269137 EIF5AL1Q6IS14 154 aaKnown RBP11.31□□□□□ -0.6
SS18-201ENST00000269137 MMD2Q8IY49 270 aa11.31□□□□□ -0.6
SS18-201ENST00000269137 PIP4P2Q8N4L2 257 aa11.31□□□□□ -0.6
SS18-201ENST00000269137 OR2T10Q8NGZ9 312 aa11.31□□□□□ -0.6
SS18-201ENST00000269137 ATP5SQ99766 215 aa11.31□□□□□ -0.6
SS18-201ENST00000269137 GINS3Q9BRX5 216 aa11.31□□□□□ -0.6
SS18-201ENST00000269137 PLEKHA3Q9HB20 300 aa11.31□□□□□ -0.6
SS18-201ENST00000269137 ENY2Q9NPA8 101 aa11.31□□□□□ -0.6
SS18-201ENST00000269137 NDUFA4L2Q9NRX3 87 aa11.31□□□□□ -0.6
SS18-201ENST00000269137 PLXNB1O43157 2135 aa11.31□□□□□ -0.6
SS18-201ENST00000269137 CCDC168Q8NDH2 2452 aa11.3□□□□□ -0.6
SS18-201ENST00000269137 PMS2P5A8MQ11 134 aa11.3□□□□□ -0.6
SS18-201ENST00000269137 IGKV1D-33P01593 117 aa11.3□□□□□ -0.6
SS18-201ENST00000269137 IGKV1-33P01594 117 aa11.3□□□□□ -0.6
SS18-201ENST00000269137 CNTFRP26992 372 aa11.3□□□□□ -0.6
SS18-201ENST00000269137 MAS1LP35410 378 aa11.3□□□□□ -0.6
SS18-201ENST00000269137 ATP5IP56385 69 aaPredicted RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms