RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 HSD17B10Q99714 261 aaKnown RBP13.89□□□□□ -0.19
SQLE-201ENST00000265896 DCAF16Q9NXF7 216 aa13.89□□□□□ -0.19
SQLE-201ENST00000265896 ATP6V1FQ16864 119 aa13.88□□□□□ -0.19
SQLE-201ENST00000265896 MIR17HGQ75NE6 70 aa13.88□□□□□ -0.19
SQLE-201ENST00000265896 FAM214BQ7L5A3 538 aa13.88□□□□□ -0.19
SQLE-201ENST00000265896 ZCCHC24Q8N2G6 241 aaKnown RBP13.88□□□□□ -0.19
SQLE-201ENST00000265896 TAAR6Q96RI8 345 aa13.88□□□□□ -0.19
SQLE-201ENST00000265896 RNASE7Q9H1E1 156 aaKnown RBP13.88□□□□□ -0.19
SQLE-201ENST00000265896 MED13LQ71F56 2210 aa13.88□□□□□ -0.19
SQLE-201ENST00000265896 WT1P19544 449 aaPredicted RBP13.88□□□□□ -0.19
SQLE-201ENST00000265896 ARSJQ5FYB0 599 aaPredicted RBP13.88□□□□□ -0.19
SQLE-201ENST00000265896 CENPVQ7Z7K6 275 aaPredicted RBP13.88□□□□□ -0.19
SQLE-201ENST00000265896 LYG1Q8N1E2 194 aa13.88□□□□□ -0.19
SQLE-201ENST00000265896 RPRMLQ8N4K4 120 aa13.88□□□□□ -0.19
SQLE-201ENST00000265896 VN1R17PQ8TDU5 208 aa13.88□□□□□ -0.19
SQLE-201ENST00000265896 C1orf159Q96HA4 380 aa13.88□□□□□ -0.19
SQLE-201ENST00000265896 SGK494Q96LW2 274 aa13.88□□□□□ -0.19
SQLE-201ENST00000265896 CIB3Q96Q77 187 aaPredicted RBP13.88□□□□□ -0.19
SQLE-201ENST00000265896 NDUFAF3Q9BU61 184 aa13.88□□□□□ -0.19
SQLE-201ENST00000265896 PPIAL4AQ9Y536 164 aa13.88□□□□□ -0.19
SQLE-201ENST00000265896 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.87□□□□□ -0.19
SQLE-201ENST00000265896 WNT2P09544 360 aa13.87□□□□□ -0.19
SQLE-201ENST00000265896 RPL15P61313 204 aaKnown RBP13.87□□□□□ -0.19
SQLE-201ENST00000265896 SMIM21Q3B7S5 101 aa13.87□□□□□ -0.19
SQLE-201ENST00000265896 KRTCAP3Q53RY4 240 aa13.87□□□□□ -0.19
SQLE-201ENST00000265896 WDR31Q8NA23 367 aa13.87□□□□□ -0.19
SQLE-201ENST00000265896 CXXC4Q9H2H0 198 aa13.87□□□□□ -0.19
SQLE-201ENST00000265896 ELOVL5Q9NYP7 299 aa13.87□□□□□ -0.19
SQLE-201ENST00000265896 RNF114Q9Y508 228 aa13.87□□□□□ -0.19
SQLE-201ENST00000265896 DCHS2Q6V1P9 2916 aa13.87□□□□□ -0.19
SQLE-201ENST00000265896 C15orf65H3BRN8 121 aa13.87□□□□□ -0.19
SQLE-201ENST00000265896 GFRA3O60609 400 aa13.87□□□□□ -0.19
SQLE-201ENST00000265896 KIR2DL2P43627 348 aaPredicted RBP13.87□□□□□ -0.19
SQLE-201ENST00000265896 SPCS3P61009 180 aa13.87□□□□□ -0.19
SQLE-201ENST00000265896 PRB3Q04118 309 aaPredicted RBP13.87□□□□□ -0.19
SQLE-201ENST00000265896 MORN2Q502X0 79 aa13.87□□□□□ -0.19
SQLE-201ENST00000265896 KMT2EQ8IZD2 1858 aa13.87□□□□□ -0.19
SQLE-201ENST00000265896 TGOLN2O43493 480 aa13.86□□□□□ -0.19
SQLE-201ENST00000265896 SERF1AO75920 110 aa13.86□□□□□ -0.19
SQLE-201ENST00000265896 OR8I2Q8N0Y5 310 aa13.86□□□□□ -0.19
SQLE-201ENST00000265896 CISD2Q8N5K1 135 aaKnown RBP13.86□□□□□ -0.19
SQLE-201ENST00000265896 STPG3Q8N7X2 389 aa13.86□□□□□ -0.19
SQLE-201ENST00000265896 GMPPAQ96IJ6 420 aaPredicted RBP13.86□□□□□ -0.19
SQLE-201ENST00000265896 GUCD1Q96NT3 240 aa13.86□□□□□ -0.19
SQLE-201ENST00000265896 S1PR3Q99500 378 aa13.86□□□□□ -0.19
SQLE-201ENST00000265896 HES4Q9HCC6 221 aa13.86□□□□□ -0.19
SQLE-201ENST00000265896 TCF19Q9Y242 345 aa13.86□□□□□ -0.19
SQLE-201ENST00000265896 DSCAMO60469 2012 aa13.86□□□□□ -0.19
SQLE-201ENST00000265896 IL6RP08887 468 aaPredicted RBP13.86□□□□□ -0.19
SQLE-201ENST00000265896 CD59P13987 128 aa13.86□□□□□ -0.19
SQLE-201ENST00000265896 ERVFC1-1P60608 527 aa13.86□□□□□ -0.19
SQLE-201ENST00000265896 ERVK-16P61578 105 aa13.86□□□□□ -0.19
SQLE-201ENST00000265896 OR10G8Q8NGN5 311 aa13.86□□□□□ -0.19
SQLE-201ENST00000265896 LINC00479Q96M42 142 aa13.86□□□□□ -0.19
SQLE-201ENST00000265896 HSPB9Q9BQS6 159 aa13.86□□□□□ -0.19
SQLE-201ENST00000265896 RYDENQ9NUL5 291 aaKnown RBP13.86□□□□□ -0.19
SQLE-201ENST00000265896 MMP23AO75900 390 aa13.86□□□□□ -0.19
SQLE-201ENST00000265896 CRYBB3P26998 211 aa13.86□□□□□ -0.19
SQLE-201ENST00000265896 REG1BP48304 166 aa13.86□□□□□ -0.19
SQLE-201ENST00000265896 BAGE3Q86Y29 109 aa13.86□□□□□ -0.19
SQLE-201ENST00000265896 BAGE2Q86Y30 109 aa13.86□□□□□ -0.19
SQLE-201ENST00000265896 OR2V2Q96R30 315 aa13.86□□□□□ -0.19
SQLE-201ENST00000265896 TP53TG3Q9ULZ0 132 aa13.86□□□□□ -0.19
SQLE-201ENST00000265896 FCN1O00602 326 aa13.85□□□□□ -0.19
SQLE-201ENST00000265896 CDX4O14627 284 aaPredicted RBP13.85□□□□□ -0.19
SQLE-201ENST00000265896 APELAP0DMC3 54 aa13.85□□□□□ -0.19
SQLE-201ENST00000265896 PSG5Q15238 335 aa13.85□□□□□ -0.19
SQLE-201ENST00000265896 Q6ZWC4 215 aa13.85□□□□□ -0.19
SQLE-201ENST00000265896 CMTM2Q8TAZ6 248 aa13.85□□□□□ -0.19
SQLE-201ENST00000265896 ACY3Q96HD9 319 aa13.85□□□□□ -0.19
SQLE-201ENST00000265896 SERTAD4Q9NUC0 356 aa13.85□□□□□ -0.19
SQLE-201ENST00000265896 NAGKQ9UJ70 344 aa13.85□□□□□ -0.19
SQLE-201ENST00000265896 M0R1B8 84 aa13.85□□□□□ -0.19
SQLE-201ENST00000265896 CA2P00918 260 aa13.85□□□□□ -0.19
SQLE-201ENST00000265896 SRP14P37108 136 aaKnown RBP13.85□□□□□ -0.19
SQLE-201ENST00000265896 EFNB3Q15768 340 aa13.85□□□□□ -0.19
SQLE-201ENST00000265896 MRPL54Q6P161 138 aaKnown RBP13.85□□□□□ -0.19
SQLE-201ENST00000265896 Q6ZT83 130 aa13.85□□□□□ -0.19
SQLE-201ENST00000265896 FER1L6-AS2Q96M78 137 aa13.85□□□□□ -0.19
SQLE-201ENST00000265896 MGST1P10620 155 aaKnown RBP13.84□□□□□ -0.19
SQLE-201ENST00000265896 RELBQ01201 579 aa13.84□□□□□ -0.19
SQLE-201ENST00000265896 IQCJQ1A5X6 159 aa13.84□□□□□ -0.19
SQLE-201ENST00000265896 RNASEH2CQ8TDP1 164 aaKnown RBP13.84□□□□□ -0.19
SQLE-201ENST00000265896 COL12A1Q99715 3063 aa13.84□□□□□ -0.19
SQLE-201ENST00000265896 ZPBPQ9BS86 351 aa13.84□□□□□ -0.19
SQLE-201ENST00000265896 SAMD10Q9BYL1 202 aa13.84□□□□□ -0.19
SQLE-201ENST00000265896 MRPL18Q9H0U6 180 aaKnown RBP13.84□□□□□ -0.19
SQLE-201ENST00000265896 CACNA1BQ00975 2339 aa13.84□□□□□ -0.19
SQLE-201ENST00000265896 IGHV1-18A0A0C4DH31 117 aa13.84□□□□□ -0.19
SQLE-201ENST00000265896 SNURFLB1AK76 121 aa13.84□□□□□ -0.19
SQLE-201ENST00000265896 OR7C2O60412 319 aa13.84□□□□□ -0.19
SQLE-201ENST00000265896 IGKV1-16P04430 117 aa13.84□□□□□ -0.19
SQLE-201ENST00000265896 TNFSF10P50591 281 aa13.84□□□□□ -0.19
SQLE-201ENST00000265896 PEAR1Q5VY43 1037 aaPredicted RBP13.84□□□□□ -0.19
SQLE-201ENST00000265896 GCSAMQ8N6F7 178 aa13.84□□□□□ -0.19
SQLE-201ENST00000265896 OR10W1Q8NGF6 305 aa13.84□□□□□ -0.19
SQLE-201ENST00000265896 OR1L6Q8NGR2 347 aa13.84□□□□□ -0.19
SQLE-201ENST00000265896 SSBP3Q9BWW4 388 aaPredicted RBP13.84□□□□□ -0.19
SQLE-201ENST00000265896 ABCA4P78363 2273 aa13.83□□□□□ -0.19
SQLE-201ENST00000265896 PIGBOS1A0A0B4J2F0 54 aa13.83□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms