RNA–Protein interactions for RNA: ENST00000263578.9

FOXRED1-201, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene FOXRED1, Length 1,970 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-201ENST00000263578 RPEQ96AT9 228 aa12.7□□□□□ -0.38
FOXRED1-201ENST00000263578 FBXO7Q9Y3I1 522 aa12.7□□□□□ -0.38
FOXRED1-201ENST00000263578 IGHV1-3A0A0C4DH29 117 aa12.69□□□□□ -0.38
FOXRED1-201ENST00000263578 TSPAN15O95858 294 aa12.69□□□□□ -0.38
FOXRED1-201ENST00000263578 USF1P22415 310 aaPredicted RBP12.69□□□□□ -0.38
FOXRED1-201ENST00000263578 PDLIM4P50479 330 aa12.69□□□□□ -0.38
FOXRED1-201ENST00000263578 VWC2Q2TAL6 325 aa12.69□□□□□ -0.38
FOXRED1-201ENST00000263578 BPIFCQ8NFQ6 507 aa12.69□□□□□ -0.38
FOXRED1-201ENST00000263578 OR11H6Q8NGC7 330 aa12.69□□□□□ -0.38
FOXRED1-201ENST00000263578 NARS2Q96I59 477 aaKnown RBP12.69□□□□□ -0.38
FOXRED1-201ENST00000263578 HINT2Q9BX68 163 aa12.69□□□□□ -0.38
FOXRED1-201ENST00000263578 PLEKHA3Q9HB20 300 aa12.69□□□□□ -0.38
FOXRED1-201ENST00000263578 INSIG2Q9Y5U4 225 aa12.69□□□□□ -0.38
FOXRED1-201ENST00000263578 IGHV3-72A0A0B4J1Y9 119 aa12.69□□□□□ -0.38
FOXRED1-201ENST00000263578 IGLV2-23P01705 113 aa12.69□□□□□ -0.38
FOXRED1-201ENST00000263578 PRTN3P24158 256 aa12.69□□□□□ -0.38
FOXRED1-201ENST00000263578 ZFP36P26651 326 aaKnown RBP12.69□□□□□ -0.38
FOXRED1-201ENST00000263578 RAB11AP62491 216 aa12.69□□□□□ -0.38
FOXRED1-201ENST00000263578 RPL8P62917 257 aaKnown RBP12.69□□□□□ -0.38
FOXRED1-201ENST00000263578 VMA21Q3ZAQ7 101 aa12.69□□□□□ -0.38
FOXRED1-201ENST00000263578 DPPA3Q6W0C5 159 aa12.69□□□□□ -0.38
FOXRED1-201ENST00000263578 ETV3LQ6ZN32 361 aa12.69□□□□□ -0.38
FOXRED1-201ENST00000263578 SLC24A4Q8NFF2 622 aa12.69□□□□□ -0.38
FOXRED1-201ENST00000263578 TMEM167AQ8TBQ9 72 aa12.69□□□□□ -0.38
FOXRED1-201ENST00000263578 TEX50A0A1B0GTY4 177 aa12.68□□□□□ -0.38
FOXRED1-201ENST00000263578 LY6LH3BQJ8 138 aa12.68□□□□□ -0.38
FOXRED1-201ENST00000263578 RRHO14718 337 aa12.68□□□□□ -0.38
FOXRED1-201ENST00000263578 NPY1RP25929 384 aa12.68□□□□□ -0.38
FOXRED1-201ENST00000263578 LGALS7P47929 136 aa12.68□□□□□ -0.38
FOXRED1-201ENST00000263578 C1orf122Q6ZSJ8 110 aa12.68□□□□□ -0.38
FOXRED1-201ENST00000263578 MOB3BQ86TA1 216 aa12.68□□□□□ -0.38
FOXRED1-201ENST00000263578 COMMD1Q8N668 190 aa12.68□□□□□ -0.38
FOXRED1-201ENST00000263578 CLDND2Q8NHS1 167 aa12.68□□□□□ -0.38
FOXRED1-201ENST00000263578 TIMM9Q9Y5J7 89 aa12.68□□□□□ -0.38
FOXRED1-201ENST00000263578 AGPAT2O15120 278 aa12.67□□□□□ -0.38
FOXRED1-201ENST00000263578 FGF7P21781 194 aa12.67□□□□□ -0.38
FOXRED1-201ENST00000263578 SERF2P84101 59 aa12.67□□□□□ -0.38
FOXRED1-201ENST00000263578 KLRD1Q13241 179 aa12.67□□□□□ -0.38
FOXRED1-201ENST00000263578 TMEM170AQ8WVE7 144 aa12.67□□□□□ -0.38
FOXRED1-201ENST00000263578 COMMD5Q9GZQ3 224 aa12.67□□□□□ -0.38
FOXRED1-201ENST00000263578 KPTNQ9Y664 436 aa12.67□□□□□ -0.38
FOXRED1-201ENST00000263578 ODF3BA8MYP8 253 aa12.67□□□□□ -0.38
FOXRED1-201ENST00000263578 OPN1MWP04001 364 aa12.67□□□□□ -0.38
FOXRED1-201ENST00000263578 OPN1MW2P0DN77 364 aa12.67□□□□□ -0.38
FOXRED1-201ENST00000263578 OPN1MW3P0DN78 364 aa12.67□□□□□ -0.38
FOXRED1-201ENST00000263578 HTR1DP28221 377 aa12.67□□□□□ -0.38
FOXRED1-201ENST00000263578 LMO4P61968 165 aa12.67□□□□□ -0.38
FOXRED1-201ENST00000263578 LCN2P80188 198 aa12.67□□□□□ -0.38
FOXRED1-201ENST00000263578 AKR1C1Q04828 323 aa12.67□□□□□ -0.38
FOXRED1-201ENST00000263578 TPTE2P1Q5T6R2 138 aa12.67□□□□□ -0.38
FOXRED1-201ENST00000263578 GGACTQ9BVM4 153 aa12.67□□□□□ -0.38
FOXRED1-201ENST00000263578 IGHV2-70DA0A0C4DH43 119 aa12.66□□□□□ -0.38
FOXRED1-201ENST00000263578 A0A1W2PPI3 338 aa12.66□□□□□ -0.38
FOXRED1-201ENST00000263578 PRSS46E5RG02 174 aa12.66□□□□□ -0.38
FOXRED1-201ENST00000263578 SLC25A17O43808 307 aa12.66□□□□□ -0.38
FOXRED1-201ENST00000263578 IFNA4P05014 189 aa12.66□□□□□ -0.38
FOXRED1-201ENST00000263578 SNCAP37840 140 aa12.66□□□□□ -0.38
FOXRED1-201ENST00000263578 SRSF3P84103 164 aaKnown RBP12.66□□□□□ -0.38
FOXRED1-201ENST00000263578 HCP5Q6MZN7 132 aa12.66□□□□□ -0.38
FOXRED1-201ENST00000263578 VMO1Q7Z5L0 202 aa12.66□□□□□ -0.38
FOXRED1-201ENST00000263578 LFNGQ8NES3 379 aa12.66□□□□□ -0.38
FOXRED1-201ENST00000263578 OR1L8Q8NGR8 309 aa12.66□□□□□ -0.38
FOXRED1-201ENST00000263578 TMEM231Q9H6L2 316 aa12.66□□□□□ -0.38
FOXRED1-201ENST00000263578 UNKLQ9H9P5 680 aaKnown RBP12.66□□□□□ -0.38
FOXRED1-201ENST00000263578 TREM1Q9NP99 234 aa12.66□□□□□ -0.38
FOXRED1-201ENST00000263578 DPM3Q9P2X0 92 aa12.66□□□□□ -0.38
FOXRED1-201ENST00000263578 UBR5O95071 2799 aaPredicted RBP12.65□□□□□ -0.38
FOXRED1-201ENST00000263578 CA2P00918 260 aa12.65□□□□□ -0.38
FOXRED1-201ENST00000263578 CD1BP29016 333 aa12.65□□□□□ -0.38
FOXRED1-201ENST00000263578 CEACAM3P40198 252 aa12.65□□□□□ -0.38
FOXRED1-201ENST00000263578 DLK1P80370 383 aa12.65□□□□□ -0.38
FOXRED1-201ENST00000263578 PAX2Q02962 417 aa12.65□□□□□ -0.38
FOXRED1-201ENST00000263578 SRSF1Q07955 248 aaKnown RBP eCLIP12.65□□□□□ -0.385e-10■■■■■ 36.9
FOXRED1-201ENST00000263578 TUSC1Q2TAM9 212 aa12.65□□□□□ -0.38
FOXRED1-201ENST00000263578 CENPVQ7Z7K6 275 aaPredicted RBP12.65□□□□□ -0.38
FOXRED1-201ENST00000263578 RITA1Q96K30 269 aa12.65□□□□□ -0.38
FOXRED1-201ENST00000263578 ZNF430Q9H8G1 570 aaPredicted RBP12.65□□□□□ -0.38
FOXRED1-201ENST00000263578 NDUFA4L2Q9NRX3 87 aa12.65□□□□□ -0.38
FOXRED1-201ENST00000263578 FAM96BQ9Y3D0 163 aa12.65□□□□□ -0.38
FOXRED1-201ENST00000263578 TMEM218A2RU14 115 aa12.65□□□□□ -0.38
FOXRED1-201ENST00000263578 H2AFB1P0C5Y9 115 aa12.65□□□□□ -0.38
FOXRED1-201ENST00000263578 MDKP21741 143 aaPredicted RBP12.65□□□□□ -0.38
FOXRED1-201ENST00000263578 LDLRAD2Q5SZI1 272 aa12.65□□□□□ -0.38
FOXRED1-201ENST00000263578 PIMREGQ9BSJ6 248 aa12.65□□□□□ -0.38
FOXRED1-201ENST00000263578 NPCDR1Q9BY65 106 aa12.65□□□□□ -0.38
FOXRED1-201ENST00000263578 WDR83OSQ9Y284 106 aa12.65□□□□□ -0.38
FOXRED1-201ENST00000263578 TACC2O95359 2948 aa12.64□□□□□ -0.39
FOXRED1-201ENST00000263578 ELLP55199 621 aaPredicted RBP12.64□□□□□ -0.39
FOXRED1-201ENST00000263578 TEX45Q8NA69 505 aa12.64□□□□□ -0.39
FOXRED1-201ENST00000263578 FAM168AQ92567 244 aa12.64□□□□□ -0.39
FOXRED1-201ENST00000263578 SIRPDQ9H106 197 aa12.64□□□□□ -0.39
FOXRED1-201ENST00000263578 TPSG1Q9NRR2 321 aa12.64□□□□□ -0.39
FOXRED1-201ENST00000263578 RPRMQ9NS64 109 aa12.64□□□□□ -0.39
FOXRED1-201ENST00000263578 A0A1B0GV50 99 aa12.63□□□□□ -0.39
FOXRED1-201ENST00000263578 A0A1W2PN81 502 aa12.63□□□□□ -0.39
FOXRED1-201ENST00000263578 SMCO3A2RU48 225 aa12.63□□□□□ -0.39
FOXRED1-201ENST00000263578 BTBD17A6NE02 478 aa12.63□□□□□ -0.39
FOXRED1-201ENST00000263578 COX6B1P14854 86 aa12.63□□□□□ -0.39
FOXRED1-201ENST00000263578 FOSL1P15407 271 aa12.63□□□□□ -0.39
FOXRED1-201ENST00000263578 HOXB4P17483 251 aaPredicted RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms