RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 C19orf35Q6ZS72 473 aa12.46□□□□□ -0.41
XRCC1-201ENST00000262887 ATOH7Q8N100 152 aa12.46□□□□□ -0.41
XRCC1-201ENST00000262887 TNFRSF14Q92956 283 aa12.46□□□□□ -0.41
XRCC1-201ENST00000262887 C11orf52Q96A22 123 aa12.46□□□□□ -0.41
XRCC1-201ENST00000262887 TAAR6Q96RI8 345 aa12.46□□□□□ -0.41
XRCC1-201ENST00000262887 SRIP30626 198 aa12.46□□□□□ -0.42
XRCC1-201ENST00000262887 BMI1P35226 326 aa12.46□□□□□ -0.42
XRCC1-201ENST00000262887 ARR3P36575 388 aa12.46□□□□□ -0.42
XRCC1-201ENST00000262887 TUSC5Q8IXB3 177 aa12.46□□□□□ -0.42
XRCC1-201ENST00000262887 Q8IYB0 196 aa12.46□□□□□ -0.42
XRCC1-201ENST00000262887 MGST2Q99735 147 aa12.46□□□□□ -0.42
XRCC1-201ENST00000262887 RTL8AQ9BWD3 113 aa12.46□□□□□ -0.42
XRCC1-201ENST00000262887 USF3Q68DE3 2245 aa12.45□□□□□ -0.42
XRCC1-201ENST00000262887 IGHV2-26A0A0B4J1V2 119 aa12.45□□□□□ -0.42
XRCC1-201ENST00000262887 IGHV3-64DA0A0J9YX35 117 aa12.45□□□□□ -0.42
XRCC1-201ENST00000262887 C12orf77C9JDV5 145 aa12.45□□□□□ -0.42
XRCC1-201ENST00000262887 CA2P00918 260 aa12.45□□□□□ -0.42
XRCC1-201ENST00000262887 LINC00205P59089 165 aa12.45□□□□□ -0.42
XRCC1-201ENST00000262887 VAMP3Q15836 100 aa12.45□□□□□ -0.42
XRCC1-201ENST00000262887 COX19Q49B96 90 aa12.45□□□□□ -0.42
XRCC1-201ENST00000262887 STUMQ69YW2 141 aa12.45□□□□□ -0.42
XRCC1-201ENST00000262887 FAM19A2Q8N3H0 131 aa12.45□□□□□ -0.42
XRCC1-201ENST00000262887 OR5B3Q8NH48 314 aa12.45□□□□□ -0.42
XRCC1-201ENST00000262887 SMIM12Q96EX1 92 aa12.45□□□□□ -0.42
XRCC1-201ENST00000262887 GGTLC1Q9BX51 225 aa12.45□□□□□ -0.42
XRCC1-201ENST00000262887 IL19Q9UHD0 177 aa12.45□□□□□ -0.42
XRCC1-201ENST00000262887 SH3BGRL2Q9UJC5 107 aa12.45□□□□□ -0.42
XRCC1-201ENST00000262887 POLDIP2Q9Y2S7 368 aa12.45□□□□□ -0.42
XRCC1-201ENST00000262887 CD46P15529 392 aa12.45□□□□□ -0.42
XRCC1-201ENST00000262887 WDR86Q86TI4 376 aa12.45□□□□□ -0.42
XRCC1-201ENST00000262887 SCCPDHQ8NBX0 429 aa12.45□□□□□ -0.42
XRCC1-201ENST00000262887 COLQQ9Y215 455 aaPredicted RBP12.45□□□□□ -0.42
XRCC1-201ENST00000262887 IGKV3D-15A0A087WSY6 115 aa12.44□□□□□ -0.42
XRCC1-201ENST00000262887 NBEAP1P0C6P0 100 aa12.44□□□□□ -0.42
XRCC1-201ENST00000262887 NTF3P20783 257 aa12.44□□□□□ -0.42
XRCC1-201ENST00000262887 CEBPDP49716 269 aaPredicted RBP12.44□□□□□ -0.42
XRCC1-201ENST00000262887 PMCHL1Q16048 86 aa12.44□□□□□ -0.42
XRCC1-201ENST00000262887 TSKUQ8WUA8 353 aa12.44□□□□□ -0.42
XRCC1-201ENST00000262887 CDC42EP3Q9UKI2 254 aa12.44□□□□□ -0.42
XRCC1-201ENST00000262887 FREM1Q5H8C1 2179 aa12.44□□□□□ -0.42
XRCC1-201ENST00000262887 TMEM30CPA0ZSE6 113 aa12.44□□□□□ -0.42
XRCC1-201ENST00000262887 LINC00473A8K010 186 aa12.44□□□□□ -0.42
XRCC1-201ENST00000262887 CDIPTO14735 213 aa12.44□□□□□ -0.42
XRCC1-201ENST00000262887 MT-CO2P00403 227 aa12.44□□□□□ -0.42
XRCC1-201ENST00000262887 ERVK11-1P61568 191 aa12.44□□□□□ -0.42
XRCC1-201ENST00000262887 SLC35B1P78383 322 aa12.44□□□□□ -0.42
XRCC1-201ENST00000262887 SSMEM1Q8WWF3 244 aa12.44□□□□□ -0.42
XRCC1-201ENST00000262887 MS4A5Q9H3V2 200 aa12.44□□□□□ -0.42
XRCC1-201ENST00000262887 ZNF430Q9H8G1 570 aaPredicted RBP12.44□□□□□ -0.42
XRCC1-201ENST00000262887 IGHV1-69-2A0A0G2JMI3 117 aa12.43□□□□□ -0.42
XRCC1-201ENST00000262887 BMPR1BO00238 502 aa12.43□□□□□ -0.42
XRCC1-201ENST00000262887 HBZP02008 142 aa12.43□□□□□ -0.42
XRCC1-201ENST00000262887 CLDN18P56856 261 aa12.43□□□□□ -0.42
XRCC1-201ENST00000262887 ZNF146Q15072 292 aa12.43□□□□□ -0.42
XRCC1-201ENST00000262887 LY6G6EA0A0G2JKS1 128 aa12.43□□□□□ -0.42
XRCC1-201ENST00000262887 PSPNO60542 156 aa12.43□□□□□ -0.42
XRCC1-201ENST00000262887 OR10J4P0C629 311 aa12.43□□□□□ -0.42
XRCC1-201ENST00000262887 OR9G9P0C7N8 305 aa12.43□□□□□ -0.42
XRCC1-201ENST00000262887 GNG4P50150 75 aa12.43□□□□□ -0.42
XRCC1-201ENST00000262887 RHOGP84095 191 aa12.43□□□□□ -0.42
XRCC1-201ENST00000262887 PNKDQ8N490 385 aa12.43□□□□□ -0.42
XRCC1-201ENST00000262887 OR2Y1Q8NGV0 311 aa12.43□□□□□ -0.42
XRCC1-201ENST00000262887 DUSP23Q9BVJ7 150 aa12.43□□□□□ -0.42
XRCC1-201ENST00000262887 U3KQA8 63 aa12.43□□□□□ -0.42
XRCC1-201ENST00000262887 WISP2O76076 250 aa12.43□□□□□ -0.42
XRCC1-201ENST00000262887 MT-CO3P00414 261 aa12.43□□□□□ -0.42
XRCC1-201ENST00000262887 HLA-DQA1P01909 254 aa12.43□□□□□ -0.42
XRCC1-201ENST00000262887 AMY1AP04745 511 aa12.43□□□□□ -0.42
XRCC1-201ENST00000262887 LCN12Q6JVE5 192 aa12.43□□□□□ -0.42
XRCC1-201ENST00000262887 VASH2Q86V25 355 aa12.43□□□□□ -0.42
XRCC1-201ENST00000262887 ZNF439Q8NDP4 499 aa12.43□□□□□ -0.42
XRCC1-201ENST00000262887 CLEC7AQ9BXN2 247 aa12.43□□□□□ -0.42
XRCC1-201ENST00000262887 HEYLQ9NQ87 328 aaPredicted RBP12.43□□□□□ -0.42
XRCC1-201ENST00000262887 OOEPA6NGQ2 149 aa12.42□□□□□ -0.42
XRCC1-201ENST00000262887 HAND1O96004 215 aa12.42□□□□□ -0.42
XRCC1-201ENST00000262887 TCL1AP56279 114 aa12.42□□□□□ -0.42
XRCC1-201ENST00000262887 IL11RAQ14626 422 aa12.42□□□□□ -0.42
XRCC1-201ENST00000262887 CENPWQ5EE01 88 aa12.42□□□□□ -0.42
XRCC1-201ENST00000262887 SPATA31B1PQ5VZV4 182 aa12.42□□□□□ -0.42
XRCC1-201ENST00000262887 BCL2L2Q92843 193 aaPredicted RBP12.42□□□□□ -0.42
XRCC1-201ENST00000262887 RNASE7Q9H1E1 156 aaKnown RBP12.42□□□□□ -0.42
XRCC1-201ENST00000262887 IGLC7A0M8Q6 106 aa12.42□□□□□ -0.42
XRCC1-201ENST00000262887 PINLYPA6NC86 204 aa12.42□□□□□ -0.42
XRCC1-201ENST00000262887 K7ERU9 68 aa12.42□□□□□ -0.42
XRCC1-201ENST00000262887 RHOBP62745 196 aa12.42□□□□□ -0.42
XRCC1-201ENST00000262887 DOLPP1Q86YN1 238 aa12.42□□□□□ -0.42
XRCC1-201ENST00000262887 MED12LQ86YW9 2145 aa12.42□□□□□ -0.42
XRCC1-201ENST00000262887 WDR31Q8NA23 367 aa12.42□□□□□ -0.42
XRCC1-201ENST00000262887 CEP192Q8TEP8 1941 aa12.41□□□□□ -0.42
XRCC1-201ENST00000262887 TRAV9-2A0A087WT02 112 aa12.41□□□□□ -0.42
XRCC1-201ENST00000262887 HELTA6NFD8 242 aa12.41□□□□□ -0.42
XRCC1-201ENST00000262887 FOXH1O75593 365 aa12.41□□□□□ -0.42
XRCC1-201ENST00000262887 SRFP11831 508 aa12.41□□□□□ -0.42
XRCC1-201ENST00000262887 FOLR3P41439 243 aa12.41□□□□□ -0.42
XRCC1-201ENST00000262887 AESQ08117 197 aa12.41□□□□□ -0.42
XRCC1-201ENST00000262887 FXYD3Q14802 87 aa12.41□□□□□ -0.42
XRCC1-201ENST00000262887 EFNB3Q15768 340 aa12.41□□□□□ -0.42
XRCC1-201ENST00000262887 MRPL54Q6P161 138 aaKnown RBP12.41□□□□□ -0.42
XRCC1-201ENST00000262887 HSD17B10Q99714 261 aaKnown RBP12.41□□□□□ -0.42
XRCC1-201ENST00000262887 OSTCQ9NRP0 149 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms