RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 NEURL1O76050 574 aa13.34□□□□□ -0.27
PRPF40B-201ENST00000261897 RBX1P62877 108 aa13.34□□□□□ -0.27
PRPF40B-201ENST00000261897 TM4SF20Q53R12 229 aa13.34□□□□□ -0.27
PRPF40B-201ENST00000261897 MIR17HGQ75NE6 70 aa13.34□□□□□ -0.27
PRPF40B-201ENST00000261897 SLC25A45Q8N413 288 aa13.34□□□□□ -0.27
PRPF40B-201ENST00000261897 TRIB1Q96RU8 372 aa13.34□□□□□ -0.27
PRPF40B-201ENST00000261897 WDR54Q9H977 334 aa13.34□□□□□ -0.27
PRPF40B-201ENST00000261897 A0A1W2PN81 502 aa13.33□□□□□ -0.27
PRPF40B-201ENST00000261897 PPIAL4DF5H284 164 aa13.33□□□□□ -0.27
PRPF40B-201ENST00000261897 TYMSP04818 313 aa13.33□□□□□ -0.27
PRPF40B-201ENST00000261897 CCL4P13236 92 aa13.33□□□□□ -0.27
PRPF40B-201ENST00000261897 TMEM11P17152 192 aa13.33□□□□□ -0.27
PRPF40B-201ENST00000261897 TNXAQ16473 311 aa13.33□□□□□ -0.27
PRPF40B-201ENST00000261897 LYSMD4Q5XG99 296 aa13.33□□□□□ -0.27
PRPF40B-201ENST00000261897 TMEM14EPQ6UXP3 125 aa13.33□□□□□ -0.27
PRPF40B-201ENST00000261897 ABI3Q9P2A4 366 aa13.33□□□□□ -0.27
PRPF40B-201ENST00000261897 SLC45A2Q9UMX9 530 aa13.33□□□□□ -0.27
PRPF40B-201ENST00000261897 DEFB108BQ8NET1 73 aa13.33□□□□□ -0.28
PRPF40B-201ENST00000261897 STRADBQ9C0K7 418 aa13.33□□□□□ -0.28
PRPF40B-201ENST00000261897 DYSFO75923 2080 aa13.33□□□□□ -0.28
PRPF40B-201ENST00000261897 TMEM116Q8NCL8 245 aa13.33□□□□□ -0.28
PRPF40B-201ENST00000261897 DUSP13Q9UII6 198 aa13.33□□□□□ -0.28
PRPF40B-201ENST00000261897 EAF1Q96JC9 268 aaPredicted RBP13.32□□□□□ -0.28
PRPF40B-201ENST00000261897 RTL8AQ9BWD3 113 aa13.32□□□□□ -0.28
PRPF40B-201ENST00000261897 PCED1AQ9H1Q7 454 aa13.32□□□□□ -0.28
PRPF40B-201ENST00000261897 PTPRZ1P23471 2315 aaPredicted RBP13.32□□□□□ -0.28
PRPF40B-201ENST00000261897 MUC21A0A0G2JKD1 596 aa13.32□□□□□ -0.28
PRPF40B-201ENST00000261897 MUC21A0A140T8X8 626 aa13.32□□□□□ -0.28
PRPF40B-201ENST00000261897 OR4C46A6NHA9 309 aa13.32□□□□□ -0.28
PRPF40B-201ENST00000261897 APELAP0DMC3 54 aa13.32□□□□□ -0.28
PRPF40B-201ENST00000261897 MYOD1P15172 320 aa13.32□□□□□ -0.28
PRPF40B-201ENST00000261897 COMPP49747 757 aaPredicted RBP13.32□□□□□ -0.28
PRPF40B-201ENST00000261897 ZNF138P52744 262 aa13.32□□□□□ -0.28
PRPF40B-201ENST00000261897 MUC21Q5SSG8 566 aa13.32□□□□□ -0.28
PRPF40B-201ENST00000261897 WDR73Q6P4I2 378 aa13.32□□□□□ -0.28
PRPF40B-201ENST00000261897 MUC15Q8N387 334 aa13.32□□□□□ -0.28
PRPF40B-201ENST00000261897 FNDC4Q9H6D8 234 aaPredicted RBP13.32□□□□□ -0.28
PRPF40B-201ENST00000261897 K7ERU9 68 aa13.32□□□□□ -0.28
PRPF40B-201ENST00000261897 PAX1P15863 534 aa13.32□□□□□ -0.28
PRPF40B-201ENST00000261897 NIT1Q86X76 327 aa13.32□□□□□ -0.28
PRPF40B-201ENST00000261897 HILPDAQ9Y5L2 63 aa13.32□□□□□ -0.28
PRPF40B-201ENST00000261897 A0A087X0K7 114 aa13.31□□□□□ -0.28
PRPF40B-201ENST00000261897 FGF23Q9GZV9 251 aaPredicted RBP13.31□□□□□ -0.28
PRPF40B-201ENST00000261897 ZNF391Q9UJN7 358 aa13.31□□□□□ -0.28
PRPF40B-201ENST00000261897 C12orf77C9JDV5 145 aa13.31□□□□□ -0.28
PRPF40B-201ENST00000261897 K7EN84 100 aa13.31□□□□□ -0.28
PRPF40B-201ENST00000261897 MT-CO3P00414 261 aa13.31□□□□□ -0.28
PRPF40B-201ENST00000261897 IGLV3-1P01715 115 aa13.31□□□□□ -0.28
PRPF40B-201ENST00000261897 IGFBP2P18065 325 aa13.31□□□□□ -0.28
PRPF40B-201ENST00000261897 SELENOVP59797 346 aa13.31□□□□□ -0.28
PRPF40B-201ENST00000261897 UBE2G1P62253 170 aa13.31□□□□□ -0.28
PRPF40B-201ENST00000261897 UBE2L3P68036 154 aaKnown RBP13.31□□□□□ -0.28
PRPF40B-201ENST00000261897 PSG7Q13046 419 aa13.31□□□□□ -0.28
PRPF40B-201ENST00000261897 NUDT11Q96G61 164 aa13.31□□□□□ -0.28
PRPF40B-201ENST00000261897 CHRDL1Q9BU40 450 aa13.31□□□□□ -0.28
PRPF40B-201ENST00000261897 TMEM30CPA0ZSE6 113 aa13.31□□□□□ -0.28
PRPF40B-201ENST00000261897 IGLL1P15814 213 aa13.31□□□□□ -0.28
PRPF40B-201ENST00000261897 MOB3BQ86TA1 216 aa13.31□□□□□ -0.28
PRPF40B-201ENST00000261897 C2CD4DB7Z1M9 353 aa13.3□□□□□ -0.28
PRPF40B-201ENST00000261897 HAND1O96004 215 aa13.3□□□□□ -0.28
PRPF40B-201ENST00000261897 FKBP2P26885 142 aaKnown RBP13.3□□□□□ -0.28
PRPF40B-201ENST00000261897 LPAL2Q16609 132 aa13.3□□□□□ -0.28
PRPF40B-201ENST00000261897 RPL39P5Q59GN2 51 aa13.3□□□□□ -0.28
PRPF40B-201ENST00000261897 PHF7Q9BWX1 381 aaPredicted RBP13.3□□□□□ -0.28
PRPF40B-201ENST00000261897 TRAV3A0A0B4J244 114 aa13.3□□□□□ -0.28
PRPF40B-201ENST00000261897 FOLR3P41439 243 aa13.3□□□□□ -0.28
PRPF40B-201ENST00000261897 CNEP1R1Q8N9A8 125 aa13.3□□□□□ -0.28
PRPF40B-201ENST00000261897 S1PR3Q99500 378 aa13.3□□□□□ -0.28
PRPF40B-201ENST00000261897 CST9LQ9H4G1 147 aa13.3□□□□□ -0.28
PRPF40B-201ENST00000261897 SH2D2AQ9NP31 389 aa13.3□□□□□ -0.28
PRPF40B-201ENST00000261897 LSM4Q9Y4Z0 139 aaKnown RBP13.3□□□□□ -0.28
PRPF40B-201ENST00000261897 TIMM9Q9Y5J7 89 aa13.3□□□□□ -0.28
PRPF40B-201ENST00000261897 GAGE10A6NGK3 116 aa13.3□□□□□ -0.28
PRPF40B-201ENST00000261897 OR5B21A6NL26 309 aa13.3□□□□□ -0.28
PRPF40B-201ENST00000261897 CELA3AP09093 270 aa13.3□□□□□ -0.28
PRPF40B-201ENST00000261897 OR9G9P0C7N8 305 aa13.3□□□□□ -0.28
PRPF40B-201ENST00000261897 SCCPDHQ8NBX0 429 aa13.3□□□□□ -0.28
PRPF40B-201ENST00000261897 TSKUQ8WUA8 353 aa13.3□□□□□ -0.28
PRPF40B-201ENST00000261897 ORAOV1Q8WV07 137 aa13.3□□□□□ -0.28
PRPF40B-201ENST00000261897 REPIN1Q9BWE0 567 aaKnown RBP13.3□□□□□ -0.28
PRPF40B-201ENST00000261897 HES7Q9BYE0 225 aa13.3□□□□□ -0.28
PRPF40B-201ENST00000261897 CDC42EP3Q9UKI2 254 aa13.3□□□□□ -0.28
PRPF40B-201ENST00000261897 CRYABP02511 175 aaKnown RBP13.29□□□□□ -0.28
PRPF40B-201ENST00000261897 PRRX1P54821 245 aa13.29□□□□□ -0.28
PRPF40B-201ENST00000261897 TMEM42Q69YG0 159 aa13.29□□□□□ -0.28
PRPF40B-201ENST00000261897 TMEM251Q8N6I4 163 aa13.29□□□□□ -0.28
PRPF40B-201ENST00000261897 C1orf53Q5VUE5 145 aa13.29□□□□□ -0.28
PRPF40B-201ENST00000261897 TEPPQ6URK8 271 aa13.29□□□□□ -0.28
PRPF40B-201ENST00000261897 ZNF784Q8NCA9 323 aaPredicted RBP13.29□□□□□ -0.28
PRPF40B-201ENST00000261897 DAZAP1Q96EP5 407 aaKnown RBP13.29□□□□□ -0.28
PRPF40B-201ENST00000261897 HSPB7Q9UBY9 170 aa13.29□□□□□ -0.28
PRPF40B-201ENST00000261897 YLPM1P49750 1951 aaKnown RBP13.29□□□□□ -0.28
PRPF40B-201ENST00000261897 CHEK1O14757 476 aa13.28□□□□□ -0.28
PRPF40B-201ENST00000261897 TIMM8AO60220 97 aaPredicted RBP13.28□□□□□ -0.28
PRPF40B-201ENST00000261897 NPY1RP25929 384 aa13.28□□□□□ -0.28
PRPF40B-201ENST00000261897 TREML4Q6UXN2 200 aa13.28□□□□□ -0.28
PRPF40B-201ENST00000261897 POLDIP2Q9Y2S7 368 aa13.28□□□□□ -0.28
PRPF40B-201ENST00000261897 IGHV3-21A0A0B4J1V1 117 aa13.28□□□□□ -0.28
PRPF40B-201ENST00000261897 LYZL6O75951 148 aa13.28□□□□□ -0.28
PRPF40B-201ENST00000261897 LINC00310P59036 64 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms