RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 RPL8P62917 257 aaKnown RBP12.52□□□□□ -0.4
CCDC90B-201ENST00000260054 RANGRFQ9HD47 186 aaPredicted RBP12.52□□□□□ -0.4
CCDC90B-201ENST00000260054 JMJD1CQ15652 2540 aa12.52□□□□□ -0.41
CCDC90B-201ENST00000260054 IGHV7-81A0A0B4J1V7 117 aa12.51□□□□□ -0.41
CCDC90B-201ENST00000260054 C15orf61A6NNL5 157 aa12.51□□□□□ -0.41
CCDC90B-201ENST00000260054 GOSR2O14653 212 aa12.51□□□□□ -0.41
CCDC90B-201ENST00000260054 IFNA21P01568 189 aa12.51□□□□□ -0.41
CCDC90B-201ENST00000260054 CX3CL1P78423 397 aa12.51□□□□□ -0.41
CCDC90B-201ENST00000260054 NDPQ00604 133 aa12.51□□□□□ -0.41
CCDC90B-201ENST00000260054 C10orf55Q5SWW7 151 aa12.51□□□□□ -0.41
CCDC90B-201ENST00000260054 MMD2Q8IY49 270 aa12.51□□□□□ -0.41
CCDC90B-201ENST00000260054 TAF15Q92804 592 aaKnown RBP eCLIP12.51□□□□□ -0.41
CCDC90B-201ENST00000260054 OR10C1Q96KK4 312 aa12.51□□□□□ -0.41
CCDC90B-201ENST00000260054 TMEM14BQ9NUH8 114 aa12.51□□□□□ -0.41
CCDC90B-201ENST00000260054 TRIM77I1YAP6 450 aa12.51□□□□□ -0.41
CCDC90B-201ENST00000260054 SNAPC5O75971 98 aa12.51□□□□□ -0.41
CCDC90B-201ENST00000260054 HLA-GP17693 338 aa12.51□□□□□ -0.41
CCDC90B-201ENST00000260054 GNB1P62873 340 aa12.51□□□□□ -0.41
CCDC90B-201ENST00000260054 SMCO1Q147U7 214 aa12.51□□□□□ -0.41
CCDC90B-201ENST00000260054 TNXAQ16473 311 aa12.51□□□□□ -0.41
CCDC90B-201ENST00000260054 FOXRED2Q8IWF2 684 aa12.51□□□□□ -0.41
CCDC90B-201ENST00000260054 OR4A16Q8NH70 328 aa12.51□□□□□ -0.41
CCDC90B-201ENST00000260054 QTRT1Q9BXR0 403 aaKnown RBP12.51□□□□□ -0.41
CCDC90B-201ENST00000260054 NPFFR1Q9GZQ6 430 aa12.51□□□□□ -0.41
CCDC90B-201ENST00000260054 MED28Q9H204 178 aa12.51□□□□□ -0.41
CCDC90B-201ENST00000260054 A0A1B0GU03 582 aa12.5□□□□□ -0.41
CCDC90B-201ENST00000260054 C13orf42A0A1B0GVH6 325 aa12.5□□□□□ -0.41
CCDC90B-201ENST00000260054 LINC01548A6NM66 108 aa12.5□□□□□ -0.41
CCDC90B-201ENST00000260054 FAM25EA8MYX2 175 aa12.5□□□□□ -0.41
CCDC90B-201ENST00000260054 SIX6O95475 246 aa12.5□□□□□ -0.41
CCDC90B-201ENST00000260054 C1QBP02746 253 aa12.5□□□□□ -0.41
CCDC90B-201ENST00000260054 OPN1MWP04001 364 aa12.5□□□□□ -0.41
CCDC90B-201ENST00000260054 SULT1A3P0DMM9 295 aa12.5□□□□□ -0.41
CCDC90B-201ENST00000260054 SULT1A4P0DMN0 295 aa12.5□□□□□ -0.41
CCDC90B-201ENST00000260054 OPN1MW2P0DN77 364 aa12.5□□□□□ -0.41
CCDC90B-201ENST00000260054 OPN1MW3P0DN78 364 aa12.5□□□□□ -0.41
CCDC90B-201ENST00000260054 RRAS2P62070 204 aaPredicted RBP12.5□□□□□ -0.41
CCDC90B-201ENST00000260054 FCN2Q15485 313 aa12.5□□□□□ -0.41
CCDC90B-201ENST00000260054 C9orf152Q5JTZ5 239 aa12.5□□□□□ -0.41
CCDC90B-201ENST00000260054 ZNF562Q6V9R5 426 aa12.5□□□□□ -0.41
CCDC90B-201ENST00000260054 ZNF767PQ75MW2 155 aa12.5□□□□□ -0.41
CCDC90B-201ENST00000260054 OR5M8Q8NGP6 311 aa12.5□□□□□ -0.41
CCDC90B-201ENST00000260054 FYTTD1Q96QD9 318 aaKnown RBP12.5□□□□□ -0.41
CCDC90B-201ENST00000260054 COA4Q9NYJ1 87 aa12.5□□□□□ -0.41
CCDC90B-201ENST00000260054 MGAT4CQ9UBM8 478 aa12.5□□□□□ -0.41
CCDC90B-201ENST00000260054 PRNDQ9UKY0 176 aa12.5□□□□□ -0.41
CCDC90B-201ENST00000260054 FOXA2Q9Y261 457 aaPredicted RBP12.5□□□□□ -0.41
CCDC90B-201ENST00000260054 C5orf51A6NDU8 294 aa12.49□□□□□ -0.41
CCDC90B-201ENST00000260054 E7EUB6 86 aa12.49□□□□□ -0.41
CCDC90B-201ENST00000260054 PITX3O75364 302 aa12.49□□□□□ -0.41
CCDC90B-201ENST00000260054 RBMXL2O75526 392 aaKnown RBP12.49□□□□□ -0.41
CCDC90B-201ENST00000260054 ACTL6BO94805 426 aa12.49□□□□□ -0.41
CCDC90B-201ENST00000260054 FGF2P09038 288 aa12.49□□□□□ -0.41
CCDC90B-201ENST00000260054 SLC25A6P12236 298 aa12.49□□□□□ -0.41
CCDC90B-201ENST00000260054 CXCL3P19876 107 aa12.49□□□□□ -0.41
CCDC90B-201ENST00000260054 COMPP49747 757 aaPredicted RBP12.49□□□□□ -0.41
CCDC90B-201ENST00000260054 FXYD3Q14802 87 aa12.49□□□□□ -0.41
CCDC90B-201ENST00000260054 IAH1Q2TAA2 248 aaPredicted RBP12.49□□□□□ -0.41
CCDC90B-201ENST00000260054 AARDQ4LEZ3 155 aa12.49□□□□□ -0.41
CCDC90B-201ENST00000260054 ZNF429Q86V71 674 aa12.49□□□□□ -0.41
CCDC90B-201ENST00000260054 OR11H7Q8NGC8 314 aa12.49□□□□□ -0.41
CCDC90B-201ENST00000260054 ZNF702PQ9H963 129 aa12.49□□□□□ -0.41
CCDC90B-201ENST00000260054 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.49□□□□□ -0.41
CCDC90B-201ENST00000260054 BOLA1Q9Y3E2 137 aa12.49□□□□□ -0.41
CCDC90B-201ENST00000260054 FBXO7Q9Y3I1 522 aa12.49□□□□□ -0.41
CCDC90B-201ENST00000260054 OR51B2Q9Y5P1 312 aa12.49□□□□□ -0.41
CCDC90B-201ENST00000260054 SETD2Q9BYW2 2564 aaPredicted RBP12.49□□□□□ -0.41
CCDC90B-201ENST00000260054 TEX50A0A1B0GTY4 177 aa12.48□□□□□ -0.41
CCDC90B-201ENST00000260054 A0A1B0GW64 132 aa12.48□□□□□ -0.41
CCDC90B-201ENST00000260054 CGB1A6NKQ9 187 aa12.48□□□□□ -0.41
CCDC90B-201ENST00000260054 ST8SIA3O43173 380 aa12.48□□□□□ -0.41
CCDC90B-201ENST00000260054 NXPH3O95157 252 aa12.48□□□□□ -0.41
CCDC90B-201ENST00000260054 IGHG2P01859 326 aa12.48□□□□□ -0.41
CCDC90B-201ENST00000260054 MAS1LP35410 378 aa12.48□□□□□ -0.41
CCDC90B-201ENST00000260054 H2BFSP57053 126 aa12.48□□□□□ -0.41
CCDC90B-201ENST00000260054 RPL15P61313 204 aaKnown RBP12.48□□□□□ -0.41
CCDC90B-201ENST00000260054 GSG1LQ6UXU4 331 aa12.48□□□□□ -0.41
CCDC90B-201ENST00000260054 OR1S1Q8NH92 325 aa12.48□□□□□ -0.41
CCDC90B-201ENST00000260054 SRSF12Q8WXF0 261 aaKnown RBP12.48□□□□□ -0.41
CCDC90B-201ENST00000260054 SPIN2AQ99865 258 aa12.48□□□□□ -0.41
CCDC90B-201ENST00000260054 SPIN2BQ9BPZ2 258 aa12.48□□□□□ -0.41
CCDC90B-201ENST00000260054 FAM103A1Q9BTL3 118 aaKnown RBP12.48□□□□□ -0.41
CCDC90B-201ENST00000260054 PRSS22Q9GZN4 317 aa12.48□□□□□ -0.41
CCDC90B-201ENST00000260054 COMMD5Q9GZQ3 224 aa12.48□□□□□ -0.41
CCDC90B-201ENST00000260054 TET2Q6N021 2002 aaPredicted RBP12.48□□□□□ -0.41
CCDC90B-201ENST00000260054 ATP6V0E1O15342 81 aa12.48□□□□□ -0.41
CCDC90B-201ENST00000260054 CNIH1O95406 144 aa12.48□□□□□ -0.41
CCDC90B-201ENST00000260054 CD83Q01151 205 aa12.48□□□□□ -0.41
CCDC90B-201ENST00000260054 Q5BKY6 102 aa12.48□□□□□ -0.41
CCDC90B-201ENST00000260054 Q6ZSV7 163 aa12.48□□□□□ -0.41
CCDC90B-201ENST00000260054 OR4D5Q8NGN0 318 aa12.48□□□□□ -0.41
CCDC90B-201ENST00000260054 OR5B3Q8NH48 314 aa12.48□□□□□ -0.41
CCDC90B-201ENST00000260054 ARPC1AQ92747 370 aa12.48□□□□□ -0.41
CCDC90B-201ENST00000260054 WDR89Q96FK6 387 aaPredicted RBP12.48□□□□□ -0.41
CCDC90B-201ENST00000260054 FKBP11Q9NYL4 201 aa12.48□□□□□ -0.41
CCDC90B-201ENST00000260054 ZNF257Q9Y2Q1 563 aa12.48□□□□□ -0.41
CCDC90B-201ENST00000260054 C2CD3Q4AC94 2353 aa12.47□□□□□ -0.41
CCDC90B-201ENST00000260054 CRYBA1P05813 215 aa12.47□□□□□ -0.41
CCDC90B-201ENST00000260054 EGR2P11161 476 aaPredicted RBP12.47□□□□□ -0.41
CCDC90B-201ENST00000260054 RPL27AP46776 148 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms