RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 PRSS46E5RG02 174 aa18.91■□□□□ 0.62
SYNGR3-201ENST00000248121 IFNA10P01566 189 aa18.91■□□□□ 0.62
SYNGR3-201ENST00000248121 APOA2P02652 100 aa18.91■□□□□ 0.62
SYNGR3-201ENST00000248121 PPIAL4GP0DN37 164 aa18.91■□□□□ 0.62
SYNGR3-201ENST00000248121 SERF2P84101 59 aa18.91■□□□□ 0.62
SYNGR3-201ENST00000248121 ZNF726P1Q15940 193 aa18.91■□□□□ 0.62
SYNGR3-201ENST00000248121 TMEM177Q53S58 311 aa18.91■□□□□ 0.62
SYNGR3-201ENST00000248121 LFNGQ8NES3 379 aa18.91■□□□□ 0.62
SYNGR3-201ENST00000248121 OSR1Q8TAX0 266 aaPredicted RBP18.91■□□□□ 0.62
SYNGR3-201ENST00000248121 IGHV2-26A0A0B4J1V2 119 aa18.9■□□□□ 0.62
SYNGR3-201ENST00000248121 H7C2Y5 167 aa18.9■□□□□ 0.62
SYNGR3-201ENST00000248121 HOXA1P49639 335 aaPredicted RBP18.9■□□□□ 0.62
SYNGR3-201ENST00000248121 KRTAP10-9P60411 292 aa18.9■□□□□ 0.62
SYNGR3-201ENST00000248121 BET1LQ9NYM9 111 aa18.9■□□□□ 0.62
SYNGR3-201ENST00000248121 TMA7Q9Y2S6 64 aaKnown RBP18.9■□□□□ 0.62
SYNGR3-201ENST00000248121 OR51B2Q9Y5P1 312 aa18.9■□□□□ 0.62
SYNGR3-201ENST00000248121 J3QKU1 62 aa18.89■□□□□ 0.62
SYNGR3-201ENST00000248121 IGLV1-47P01700 117 aa18.89■□□□□ 0.62
SYNGR3-201ENST00000248121 SSX7Q7RTT5 188 aa18.89■□□□□ 0.62
SYNGR3-201ENST00000248121 SREK1IP1Q8N9Q2 155 aaPredicted RBP18.89■□□□□ 0.62
SYNGR3-201ENST00000248121 LY6G5BQ8NDX9 201 aa18.89■□□□□ 0.62
SYNGR3-201ENST00000248121 SFT2D1Q8WV19 159 aa18.89■□□□□ 0.62
SYNGR3-201ENST00000248121 HARBI1Q96MB7 349 aa18.89■□□□□ 0.62
SYNGR3-201ENST00000248121 PRNDQ9UKY0 176 aa18.89■□□□□ 0.62
SYNGR3-201ENST00000248121 TIMM9Q9Y5J7 89 aa18.89■□□□□ 0.62
SYNGR3-201ENST00000248121 M6PRP20645 277 aa18.89■□□□□ 0.61
SYNGR3-201ENST00000248121 CLCC1Q96S66 551 aa18.89■□□□□ 0.61
SYNGR3-201ENST00000248121 SSBP3Q9BWW4 388 aaPredicted RBP18.89■□□□□ 0.61
SYNGR3-201ENST00000248121 EIF5A2Q9GZV4 153 aaKnown RBP18.89■□□□□ 0.61
SYNGR3-201ENST00000248121 SVEP1Q4LDE5 3571 aa18.89■□□□□ 0.61
SYNGR3-201ENST00000248121 ABCA2Q9BZC7 2435 aa18.89■□□□□ 0.61
SYNGR3-201ENST00000248121 FGF7P21781 194 aa18.88■□□□□ 0.61
SYNGR3-201ENST00000248121 ZFP36P26651 326 aaKnown RBP18.88■□□□□ 0.61
SYNGR3-201ENST00000248121 LHX4Q969G2 390 aa18.88■□□□□ 0.61
SYNGR3-201ENST00000248121 RARRES2Q99969 163 aa18.88■□□□□ 0.61
SYNGR3-201ENST00000248121 A0A1B0GW64 132 aa18.88■□□□□ 0.61
SYNGR3-201ENST00000248121 KBTBD11O94819 623 aa18.88■□□□□ 0.61
SYNGR3-201ENST00000248121 IGKV1D-33P01593 117 aa18.88■□□□□ 0.61
SYNGR3-201ENST00000248121 IGKV1-33P01594 117 aa18.88■□□□□ 0.61
SYNGR3-201ENST00000248121 ELLP55199 621 aaPredicted RBP18.88■□□□□ 0.61
SYNGR3-201ENST00000248121 RPP30P78346 268 aaKnown RBP18.88■□□□□ 0.61
SYNGR3-201ENST00000248121 PEA15Q15121 130 aa18.88■□□□□ 0.61
SYNGR3-201ENST00000248121 HIST2H2BCQ6DN03 193 aa18.88■□□□□ 0.61
SYNGR3-201ENST00000248121 ACSM6Q6P461 480 aa18.88■□□□□ 0.61
SYNGR3-201ENST00000248121 ETV3LQ6ZN32 361 aa18.88■□□□□ 0.61
SYNGR3-201ENST00000248121 PDPNQ86YL7 162 aa18.88■□□□□ 0.61
SYNGR3-201ENST00000248121 TGIF2LXQ8IUE1 241 aa18.88■□□□□ 0.61
SYNGR3-201ENST00000248121 SVBPQ8N300 66 aa18.88■□□□□ 0.61
SYNGR3-201ENST00000248121 Q8N7P7 452 aa18.88■□□□□ 0.61
SYNGR3-201ENST00000248121 FLYWCH2Q96CP2 140 aaKnown RBP18.88■□□□□ 0.61
SYNGR3-201ENST00000248121 NKX6-2Q9C056 277 aaPredicted RBP18.88■□□□□ 0.61
SYNGR3-201ENST00000248121 ZNF257Q9Y2Q1 563 aa18.88■□□□□ 0.61
SYNGR3-201ENST00000248121 IGHV2-5P01817 119 aa18.87■□□□□ 0.61
SYNGR3-201ENST00000248121 RBP4P02753 201 aa18.87■□□□□ 0.61
SYNGR3-201ENST00000248121 OPN1MWP04001 364 aa18.87■□□□□ 0.61
SYNGR3-201ENST00000248121 OPN1MW2P0DN77 364 aa18.87■□□□□ 0.61
SYNGR3-201ENST00000248121 OPN1MW3P0DN78 364 aa18.87■□□□□ 0.61
SYNGR3-201ENST00000248121 PPT1P50897 306 aa18.87■□□□□ 0.61
SYNGR3-201ENST00000248121 HLA-DRB5Q30154 266 aa18.87■□□□□ 0.61
SYNGR3-201ENST00000248121 NPCDR1Q9BY65 106 aa18.87■□□□□ 0.61
SYNGR3-201ENST00000248121 KIAA1456Q9P272 454 aa18.87■□□□□ 0.61
SYNGR3-201ENST00000248121 POLQO75417 2590 aa18.87■□□□□ 0.61
SYNGR3-201ENST00000248121 BTBD17A6NE02 478 aa18.86■□□□□ 0.61
SYNGR3-201ENST00000248121 TMEM41BQ5BJD5 291 aa18.86■□□□□ 0.61
SYNGR3-201ENST00000248121 OR4C13Q8NGP0 309 aa18.86■□□□□ 0.61
SYNGR3-201ENST00000248121 SUN5Q8TC36 379 aa18.86■□□□□ 0.61
SYNGR3-201ENST00000248121 TNFRSF14Q92956 283 aa18.86■□□□□ 0.61
SYNGR3-201ENST00000248121 PERPQ96FX8 193 aa18.86■□□□□ 0.61
SYNGR3-201ENST00000248121 RCC1LQ96I51 464 aaKnown RBP18.86■□□□□ 0.61
SYNGR3-201ENST00000248121 PCGF1Q9BSM1 259 aa18.86■□□□□ 0.61
SYNGR3-201ENST00000248121 TRAV1-1A0A0B4J248 108 aa18.86■□□□□ 0.61
SYNGR3-201ENST00000248121 TEX50A0A1B0GTY4 177 aa18.86■□□□□ 0.61
SYNGR3-201ENST00000248121 IGLV2-23P01705 113 aa18.86■□□□□ 0.61
SYNGR3-201ENST00000248121 ATP5J2P56134 94 aa18.86■□□□□ 0.61
SYNGR3-201ENST00000248121 PRCDQ00LT1 54 aa18.86■□□□□ 0.61
SYNGR3-201ENST00000248121 CLDND2Q8NHS1 167 aa18.86■□□□□ 0.61
SYNGR3-201ENST00000248121 AIFM2Q9BRQ8 373 aa18.86■□□□□ 0.61
SYNGR3-201ENST00000248121 ONECUT1Q9UBC0 465 aa18.86■□□□□ 0.61
SYNGR3-201ENST00000248121 WDR83OSQ9Y284 106 aa18.86■□□□□ 0.61
SYNGR3-201ENST00000248121 WASHC3Q9Y3C0 194 aa18.86■□□□□ 0.61
SYNGR3-201ENST00000248121 HELZ2Q9BYK8 2649 aaKnown RBP18.86■□□□□ 0.61
SYNGR3-201ENST00000248121 A0A1W2PPH5 198 aa18.85■□□□□ 0.61
SYNGR3-201ENST00000248121 CD1BP29016 333 aa18.85■□□□□ 0.61
SYNGR3-201ENST00000248121 RAB2AP61019 212 aa18.85■□□□□ 0.61
SYNGR3-201ENST00000248121 SLC24A4Q8NFF2 622 aa18.85■□□□□ 0.61
SYNGR3-201ENST00000248121 MBD3L1Q8WWY6 194 aa18.85■□□□□ 0.61
SYNGR3-201ENST00000248121 RITA1Q96K30 269 aa18.85■□□□□ 0.61
SYNGR3-201ENST00000248121 PBDC1Q9BVG4 233 aa18.85■□□□□ 0.61
SYNGR3-201ENST00000248121 HINT2Q9BX68 163 aa18.85■□□□□ 0.61
SYNGR3-201ENST00000248121 SCAF4O95104 1147 aaKnown RBP18.85■□□□□ 0.61
SYNGR3-201ENST00000248121 RPP25LQ8N5L8 163 aaKnown RBP18.85■□□□□ 0.61
SYNGR3-201ENST00000248121 CLEC7AQ9BXN2 247 aa18.85■□□□□ 0.61
SYNGR3-201ENST00000248121 PTPN13Q12923 2485 aa18.84■□□□□ 0.61
SYNGR3-201ENST00000248121 RBFOX3A6NFN3 312 aa18.84■□□□□ 0.61
SYNGR3-201ENST00000248121 DNASE2O00115 360 aaPredicted RBP18.84■□□□□ 0.61
SYNGR3-201ENST00000248121 LIPFP07098 398 aa18.84■□□□□ 0.61
SYNGR3-201ENST00000248121 ZNF787Q6DD87 383 aa18.84■□□□□ 0.61
SYNGR3-201ENST00000248121 WNK2Q9Y3S1 2297 aa18.84■□□□□ 0.61
SYNGR3-201ENST00000248121 FAM74A7A6NL05 159 aa18.83■□□□□ 0.61
SYNGR3-201ENST00000248121 BUB1B-PAK6H3BSN5 160 aa18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms