RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 POU2AF1Q16633 256 aa10.64□□□□□ -0.71
VEGFA-201ENST00000230480 COMMD7Q86VX2 200 aa10.64□□□□□ -0.71
VEGFA-201ENST00000230480 OR4F17Q8NGA8 305 aa10.64□□□□□ -0.71
VEGFA-201ENST00000230480 TMEM167AQ8TBQ9 72 aa10.64□□□□□ -0.71
VEGFA-201ENST00000230480 TCTEX1D2Q8WW35 142 aa10.64□□□□□ -0.71
VEGFA-201ENST00000230480 ARPC1AQ92747 370 aa10.64□□□□□ -0.71
VEGFA-201ENST00000230480 OR4F4Q96R69 305 aa10.64□□□□□ -0.71
VEGFA-201ENST00000230480 C7orf50Q9BRJ6 194 aaKnown RBP10.64□□□□□ -0.71
VEGFA-201ENST00000230480 ALX4Q9H161 411 aaPredicted RBP10.64□□□□□ -0.71
VEGFA-201ENST00000230480 COPZ2Q9P299 210 aa10.64□□□□□ -0.71
VEGFA-201ENST00000230480 UBQLN2Q9UHD9 624 aa10.64□□□□□ -0.71
VEGFA-201ENST00000230480 DNAH9Q9NYC9 4486 aa10.63□□□□□ -0.71
VEGFA-201ENST00000230480 RPS10-NUDT3A0A1W2PQS6 291 aa10.63□□□□□ -0.71
VEGFA-201ENST00000230480 TEX22C9J3V5 150 aa10.63□□□□□ -0.71
VEGFA-201ENST00000230480 GABARAPH6UMI1 98 aa10.63□□□□□ -0.71
VEGFA-201ENST00000230480 CTDSPLO15194 276 aa10.63□□□□□ -0.71
VEGFA-201ENST00000230480 RBFOX2O43251 390 aaKnown RBP eCLIP10.63□□□□□ -0.715e-9■□□□□ 10.6
VEGFA-201ENST00000230480 IGKV1-39P01597 117 aa10.63□□□□□ -0.71
VEGFA-201ENST00000230480 IGKV1D-39P04432 117 aa10.63□□□□□ -0.71
VEGFA-201ENST00000230480 IGLL1P15814 213 aa10.63□□□□□ -0.71
VEGFA-201ENST00000230480 ZP3P21754 424 aa10.63□□□□□ -0.71
VEGFA-201ENST00000230480 SLC6A1P30531 599 aa10.63□□□□□ -0.71
VEGFA-201ENST00000230480 UCP3P55916 312 aa10.63□□□□□ -0.71
VEGFA-201ENST00000230480 GNB1P62873 340 aa10.63□□□□□ -0.71
VEGFA-201ENST00000230480 DEFA6Q01524 100 aa10.63□□□□□ -0.71
VEGFA-201ENST00000230480 TMEM65Q6PI78 240 aa10.63□□□□□ -0.71
VEGFA-201ENST00000230480 UNQ5815/PRO19632Q6UWF5 114 aa10.63□□□□□ -0.71
VEGFA-201ENST00000230480 C19orf35Q6ZS72 473 aa10.63□□□□□ -0.71
VEGFA-201ENST00000230480 SPAG16Q8N0X2 631 aa10.63□□□□□ -0.71
VEGFA-201ENST00000230480 TMEM229BQ8NBD8 167 aa10.63□□□□□ -0.71
VEGFA-201ENST00000230480 KLHL30-AS1Q8NEE0 82 aa10.63□□□□□ -0.71
VEGFA-201ENST00000230480 SMIM4Q8WVI0 70 aa10.63□□□□□ -0.71
VEGFA-201ENST00000230480 UBE2E2Q96LR5 201 aa10.63□□□□□ -0.71
VEGFA-201ENST00000230480 RABL2AQ9UBK7 228 aaPredicted RBP10.63□□□□□ -0.71
VEGFA-201ENST00000230480 RABL2BQ9UNT1 228 aa10.63□□□□□ -0.71
VEGFA-201ENST00000230480 A0A1W2PN81 502 aa10.62□□□□□ -0.71
VEGFA-201ENST00000230480 MSGN1A6NI15 193 aa10.62□□□□□ -0.71
VEGFA-201ENST00000230480 GSTZ1O43708 216 aaPredicted RBP10.62□□□□□ -0.71
VEGFA-201ENST00000230480 CHRNA7P36544 502 aa10.62□□□□□ -0.71
VEGFA-201ENST00000230480 MYCNOSP40205 109 aa10.62□□□□□ -0.71
VEGFA-201ENST00000230480 RUNX1Q01196 453 aa10.62□□□□□ -0.71
VEGFA-201ENST00000230480 DEFA5Q01523 94 aa10.62□□□□□ -0.71
VEGFA-201ENST00000230480 IL18Q14116 193 aa10.62□□□□□ -0.71
VEGFA-201ENST00000230480 PLGLAQ15195 96 aa10.62□□□□□ -0.71
VEGFA-201ENST00000230480 PDLIM3Q53GG5 364 aaPredicted RBP10.62□□□□□ -0.71
VEGFA-201ENST00000230480 CXorf66Q5JRM2 361 aaPredicted RBP10.62□□□□□ -0.71
VEGFA-201ENST00000230480 KHDC1LQ5JSQ8 128 aa10.62□□□□□ -0.71
VEGFA-201ENST00000230480 PYHIN1Q6K0P9 492 aa10.62□□□□□ -0.71
VEGFA-201ENST00000230480 FAAP20Q6NZ36 180 aa10.62□□□□□ -0.71
VEGFA-201ENST00000230480 OR5T1Q8NG75 326 aa10.62□□□□□ -0.71
VEGFA-201ENST00000230480 OR51H1Q8NH63 302 aa10.62□□□□□ -0.71
VEGFA-201ENST00000230480 RHOVQ96L33 236 aa10.62□□□□□ -0.71
VEGFA-201ENST00000230480 FOXA2Q9Y261 457 aaPredicted RBP10.62□□□□□ -0.71
VEGFA-201ENST00000230480 PRELID3BQ9Y3B1 194 aa10.62□□□□□ -0.71
VEGFA-201ENST00000230480 SORL1Q92673 2214 aa10.61□□□□□ -0.71
VEGFA-201ENST00000230480 CCL24O00175 119 aa10.61□□□□□ -0.71
VEGFA-201ENST00000230480 KBTBD11O94819 623 aa10.61□□□□□ -0.71
VEGFA-201ENST00000230480 S1PR2O95136 353 aa10.61□□□□□ -0.71
VEGFA-201ENST00000230480 BRI3O95415 125 aa10.61□□□□□ -0.71
VEGFA-201ENST00000230480 APELAP0DMC3 54 aa10.61□□□□□ -0.71
VEGFA-201ENST00000230480 PF4V1P10720 104 aa10.61□□□□□ -0.71
VEGFA-201ENST00000230480 ACTBL2Q562R1 376 aa10.61□□□□□ -0.71
VEGFA-201ENST00000230480 OR4A47Q6IF82 309 aa10.61□□□□□ -0.71
VEGFA-201ENST00000230480 ADAD2Q8NCV1 583 aaKnown RBP10.61□□□□□ -0.71
VEGFA-201ENST00000230480 OR4S2Q8NH73 311 aa10.61□□□□□ -0.71
VEGFA-201ENST00000230480 C4orf3Q8WVX3 66 aa10.61□□□□□ -0.71
VEGFA-201ENST00000230480 FCAMRQ8WWV6 532 aa10.61□□□□□ -0.71
VEGFA-201ENST00000230480 SRSF12Q8WXF0 261 aaKnown RBP10.61□□□□□ -0.71
VEGFA-201ENST00000230480 MS4A10Q96PG2 267 aa10.61□□□□□ -0.71
VEGFA-201ENST00000230480 GPR31O00270 319 aa10.6□□□□□ -0.71
VEGFA-201ENST00000230480 OR2A4O95047 310 aa10.6□□□□□ -0.71
VEGFA-201ENST00000230480 PRB2P02812 416 aaPredicted RBP10.6□□□□□ -0.71
VEGFA-201ENST00000230480 RLN1P04808 185 aa10.6□□□□□ -0.71
VEGFA-201ENST00000230480 PI3P19957 117 aa10.6□□□□□ -0.71
VEGFA-201ENST00000230480 F2RP25116 425 aa10.6□□□□□ -0.71
VEGFA-201ENST00000230480 KRTAP10-11P60412 298 aa10.6□□□□□ -0.71
VEGFA-201ENST00000230480 HERV-K104P61576 105 aa10.6□□□□□ -0.71
VEGFA-201ENST00000230480 FCN2Q15485 313 aa10.6□□□□□ -0.71
VEGFA-201ENST00000230480 KLK9Q2XQG4 91 aa10.6□□□□□ -0.71
VEGFA-201ENST00000230480 VMA21Q3ZAQ7 101 aa10.6□□□□□ -0.71
VEGFA-201ENST00000230480 PHLDA2Q53GA4 152 aa10.6□□□□□ -0.71
VEGFA-201ENST00000230480 ZNF57Q68EA5 555 aaPredicted RBP10.6□□□□□ -0.71
VEGFA-201ENST00000230480 SSX9Q7RTT3 188 aa10.6□□□□□ -0.71
VEGFA-201ENST00000230480 TCTEX1D1Q8N7M0 179 aa10.6□□□□□ -0.71
VEGFA-201ENST00000230480 OR13C8Q8NGS7 320 aa10.6□□□□□ -0.71
VEGFA-201ENST00000230480 OR5B12Q96R08 314 aa10.6□□□□□ -0.71
VEGFA-201ENST00000230480 OR2A7Q96R45 310 aa10.6□□□□□ -0.71
VEGFA-201ENST00000230480 BET1LQ9NYM9 111 aa10.6□□□□□ -0.71
VEGFA-201ENST00000230480 SCP2D1Q9UJQ7 156 aa10.6□□□□□ -0.71
VEGFA-201ENST00000230480 KLK9Q9UKQ9 250 aa10.6□□□□□ -0.71
VEGFA-201ENST00000230480 DMRT1Q9Y5R6 373 aa10.6□□□□□ -0.71
VEGFA-201ENST00000230480 ANKRD20A5PA0PJZ0 165 aa10.59□□□□□ -0.71
VEGFA-201ENST00000230480 DBX1A6NMT0 343 aa10.59□□□□□ -0.71
VEGFA-201ENST00000230480 UPK2O00526 184 aa10.59□□□□□ -0.71
VEGFA-201ENST00000230480 HPRT1P00492 218 aa10.59□□□□□ -0.71
VEGFA-201ENST00000230480 RPA2P15927 270 aa10.59□□□□□ -0.71
VEGFA-201ENST00000230480 LPAR6P43657 344 aa10.59□□□□□ -0.71
VEGFA-201ENST00000230480 DHODHQ02127 395 aa10.59□□□□□ -0.71
VEGFA-201ENST00000230480 SSBP1Q04837 148 aaKnown RBP10.59□□□□□ -0.71
VEGFA-201ENST00000230480 TNXAQ16473 311 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms