RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 ARL2-SNX15V9GYD0 113 aa17.02■□□□□ 0.32
SNX3-201ENST00000230085 SIRPB1O00241 398 aa17.02■□□□□ 0.31
SNX3-201ENST00000230085 G6PCP35575 357 aa17.02■□□□□ 0.31
SNX3-201ENST00000230085 OR52E5Q8NH55 327 aa17.02■□□□□ 0.31
SNX3-201ENST00000230085 BCL2L2Q92843 193 aaPredicted RBP17.02■□□□□ 0.31
SNX3-201ENST00000230085 MS4A10Q96PG2 267 aa17.02■□□□□ 0.31
SNX3-201ENST00000230085 TMEM106BQ9NUM4 274 aa17.02■□□□□ 0.31
SNX3-201ENST00000230085 DOPEY1Q5JWR5 2465 aa17.01■□□□□ 0.31
SNX3-201ENST00000230085 TRBV9A0A0B4J1U6 114 aa17.01■□□□□ 0.31
SNX3-201ENST00000230085 S1PR2O95136 353 aa17.01■□□□□ 0.31
SNX3-201ENST00000230085 KRASP01116 189 aa17.01■□□□□ 0.31
SNX3-201ENST00000230085 STAG3L2P0CL84 134 aa17.01■□□□□ 0.31
SNX3-201ENST00000230085 STAG3L3P0CL85 134 aa17.01■□□□□ 0.31
SNX3-201ENST00000230085 C11orf52Q96A22 123 aa17.01■□□□□ 0.31
SNX3-201ENST00000230085 LRRK2Q5S007 2527 aa17■□□□□ 0.31
SNX3-201ENST00000230085 CD1BP29016 333 aa17■□□□□ 0.31
SNX3-201ENST00000230085 CHRNA7P36544 502 aa17■□□□□ 0.31
SNX3-201ENST00000230085 RPP30P78346 268 aaKnown RBP17■□□□□ 0.31
SNX3-201ENST00000230085 FBXW9Q5XUX1 488 aa17■□□□□ 0.31
SNX3-201ENST00000230085 H2BFWTQ7Z2G1 175 aa17■□□□□ 0.31
SNX3-201ENST00000230085 OR2D2Q9H210 308 aa17■□□□□ 0.31
SNX3-201ENST00000230085 MDFIC2A0A1B0GVS7 189 aa17■□□□□ 0.31
SNX3-201ENST00000230085 C9JCJ5 164 aa17■□□□□ 0.31
SNX3-201ENST00000230085 C12orf77C9JDV5 145 aa17■□□□□ 0.31
SNX3-201ENST00000230085 HMGB3O15347 200 aaKnown RBP17■□□□□ 0.31
SNX3-201ENST00000230085 Q0VG73 95 aa17■□□□□ 0.31
SNX3-201ENST00000230085 SGMS2Q8NHU3 365 aa17■□□□□ 0.31
SNX3-201ENST00000230085 SCGB1D1O95968 90 aa16.99■□□□□ 0.31
SNX3-201ENST00000230085 GRNP28799 593 aaKnown RBP16.99■□□□□ 0.31
SNX3-201ENST00000230085 TPPP2P59282 170 aa16.99■□□□□ 0.31
SNX3-201ENST00000230085 FAM27E3Q08E93 113 aa16.99■□□□□ 0.31
SNX3-201ENST00000230085 PRSS8Q16651 343 aa16.99■□□□□ 0.31
SNX3-201ENST00000230085 Q6ZT83 130 aa16.99■□□□□ 0.31
SNX3-201ENST00000230085 HCFC1P51610 2035 aa16.99■□□□□ 0.31
SNX3-201ENST00000230085 TRAV39A0A0B4J263 110 aa16.98■□□□□ 0.31
SNX3-201ENST00000230085 C17orf98A8MV24 154 aa16.98■□□□□ 0.31
SNX3-201ENST00000230085 IQCF6A8MYZ5 107 aa16.98■□□□□ 0.31
SNX3-201ENST00000230085 PRSS46E5RG02 174 aa16.98■□□□□ 0.31
SNX3-201ENST00000230085 CDIPTO14735 213 aa16.98■□□□□ 0.31
SNX3-201ENST00000230085 NXPH2O95156 264 aa16.98■□□□□ 0.31
SNX3-201ENST00000230085 NDUFB4O95168 129 aa16.98■□□□□ 0.31
SNX3-201ENST00000230085 CXorf1O96002 111 aa16.98■□□□□ 0.31
SNX3-201ENST00000230085 HAND1O96004 215 aa16.98■□□□□ 0.31
SNX3-201ENST00000230085 GCH1P30793 250 aa16.98■□□□□ 0.31
SNX3-201ENST00000230085 TRAT1Q6PIZ9 186 aa16.98■□□□□ 0.31
SNX3-201ENST00000230085 TMEM256Q8N2U0 113 aa16.98■□□□□ 0.31
SNX3-201ENST00000230085 CMTM2Q8TAZ6 248 aa16.98■□□□□ 0.31
SNX3-201ENST00000230085 MIEN1Q9BRT3 115 aa16.98■□□□□ 0.31
SNX3-201ENST00000230085 OR51B6Q9H340 312 aa16.98■□□□□ 0.31
SNX3-201ENST00000230085 SPTAN1Q13813 2472 aaKnown RBP16.98■□□□□ 0.31
SNX3-201ENST00000230085 RBFOX2O43251 390 aaKnown RBP eCLIP16.97■□□□□ 0.31
SNX3-201ENST00000230085 SELEP16581 610 aa16.97■□□□□ 0.31
SNX3-201ENST00000230085 RELQ04864 619 aaPredicted RBP16.97■□□□□ 0.31
SNX3-201ENST00000230085 TPTE2P1Q5T6R2 138 aa16.97■□□□□ 0.31
SNX3-201ENST00000230085 C9orf135Q5VTT2 229 aa16.97■□□□□ 0.31
SNX3-201ENST00000230085 CBLN4Q9NTU7 201 aa16.97■□□□□ 0.31
SNX3-201ENST00000230085 IL36BQ9NZH7 164 aa16.97■□□□□ 0.31
SNX3-201ENST00000230085 TRBV20OR9-2A0A075B6H5 130 aa16.97■□□□□ 0.31
SNX3-201ENST00000230085 MMP23AO75900 390 aa16.97■□□□□ 0.31
SNX3-201ENST00000230085 HPRT1P00492 218 aa16.97■□□□□ 0.31
SNX3-201ENST00000230085 AREGP15514 252 aa16.97■□□□□ 0.31
SNX3-201ENST00000230085 IGHV1-2P23083 117 aa16.97■□□□□ 0.31
SNX3-201ENST00000230085 ATP5G3P48201 142 aa16.97■□□□□ 0.31
SNX3-201ENST00000230085 TBC1D28Q2M2D7 210 aa16.97■□□□□ 0.31
SNX3-201ENST00000230085 FBXL19-AS1Q494R0 122 aa16.97■□□□□ 0.31
SNX3-201ENST00000230085 COX19Q49B96 90 aa16.97■□□□□ 0.31
SNX3-201ENST00000230085 PRR18Q8N4B5 295 aa16.97■□□□□ 0.31
SNX3-201ENST00000230085 OR10G8Q8NGN5 311 aa16.97■□□□□ 0.31
SNX3-201ENST00000230085 DOPEY2Q9Y3R5 2298 aa16.96■□□□□ 0.31
SNX3-201ENST00000230085 IFNL4K9M1U5 179 aa16.96■□□□□ 0.31
SNX3-201ENST00000230085 HBZP02008 142 aa16.96■□□□□ 0.31
SNX3-201ENST00000230085 KITLGP21583 273 aa16.96■□□□□ 0.31
SNX3-201ENST00000230085 ADMP35318 185 aa16.96■□□□□ 0.31
SNX3-201ENST00000230085 OR3A1P47881 315 aa16.96■□□□□ 0.31
SNX3-201ENST00000230085 HTD2P86397 168 aa16.96■□□□□ 0.31
SNX3-201ENST00000230085 ZNF718Q3SXZ3 478 aa16.96■□□□□ 0.31
SNX3-201ENST00000230085 CXorf67Q86X51 503 aaPredicted RBP16.96■□□□□ 0.31
SNX3-201ENST00000230085 ZDHHC16Q969W1 377 aa16.96■□□□□ 0.31
SNX3-201ENST00000230085 TP53TG3Q9ULZ0 132 aa16.96■□□□□ 0.31
SNX3-201ENST00000230085 ICE1Q9Y2F5 2266 aa16.96■□□□□ 0.3
SNX3-201ENST00000230085 A0A1W2PPV4 95 aa16.95■□□□□ 0.3
SNX3-201ENST00000230085 A1L4Q6 167 aa16.95■□□□□ 0.3
SNX3-201ENST00000230085 LYZL6O75951 148 aa16.95■□□□□ 0.3
SNX3-201ENST00000230085 OR10J4P0C629 311 aa16.95■□□□□ 0.3
SNX3-201ENST00000230085 LINC00614P0C842 121 aa16.95■□□□□ 0.3
SNX3-201ENST00000230085 LINC00310P59036 64 aa16.95■□□□□ 0.3
SNX3-201ENST00000230085 ZNF816Q0VGE8 651 aaPredicted RBP16.95■□□□□ 0.3
SNX3-201ENST00000230085 CLEC12BQ2HXU8 276 aa16.95■□□□□ 0.3
SNX3-201ENST00000230085 RNASE6Q93091 150 aaKnown RBP16.95■□□□□ 0.3
SNX3-201ENST00000230085 TBX15Q96SF7 602 aa16.95■□□□□ 0.3
SNX3-201ENST00000230085 QTRT1Q9BXR0 403 aaKnown RBP16.95■□□□□ 0.3
SNX3-201ENST00000230085 UTP20O75691 2785 aaKnown RBP16.95■□□□□ 0.3
SNX3-201ENST00000230085 SAA2-SAA4A0A096LPE2 208 aa16.94■□□□□ 0.3
SNX3-201ENST00000230085 MARCH11A6NNE9 402 aa16.94■□□□□ 0.3
SNX3-201ENST00000230085 C19orf84I3L1E1 186 aa16.94■□□□□ 0.3
SNX3-201ENST00000230085 NUPR1O60356 82 aa16.94■□□□□ 0.3
SNX3-201ENST00000230085 PSPNO60542 156 aa16.94■□□□□ 0.3
SNX3-201ENST00000230085 SMPD2O60906 423 aa16.94■□□□□ 0.3
SNX3-201ENST00000230085 RPLP1P05386 114 aaKnown RBP16.94■□□□□ 0.3
SNX3-201ENST00000230085 SPATA46Q5T0L3 261 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms