RNA–Protein interactions for RNA: ENST00000226225.6

TNFAIP1-201, Transcript of TNF alpha induced protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP1, Length 3,627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-201ENST00000226225 TMEM106BQ9NUM4 274 aa9.72□□□□□ -0.85
TNFAIP1-201ENST00000226225 DVL1O14640 695 aa9.71□□□□□ -0.85
TNFAIP1-201ENST00000226225 PCP4P48539 62 aa9.71□□□□□ -0.85
TNFAIP1-201ENST00000226225 ERVK11-1P61568 191 aa9.71□□□□□ -0.85
TNFAIP1-201ENST00000226225 HERPUD1Q15011 391 aa9.71□□□□□ -0.85
TNFAIP1-201ENST00000226225 TDRG1Q3Y452 100 aa9.71□□□□□ -0.85
TNFAIP1-201ENST00000226225 DUX4L9Q6RFH8 374 aaPredicted RBP9.71□□□□□ -0.85
TNFAIP1-201ENST00000226225 Q6ZRM9 215 aa9.71□□□□□ -0.85
TNFAIP1-201ENST00000226225 MRPL30Q8TCC3 161 aaKnown RBP9.71□□□□□ -0.85
TNFAIP1-201ENST00000226225 TBX15Q96SF7 602 aa9.71□□□□□ -0.85
TNFAIP1-201ENST00000226225 SMDT1Q9H4I9 107 aa9.71□□□□□ -0.85
TNFAIP1-201ENST00000226225 DOPEY1Q5JWR5 2465 aa9.71□□□□□ -0.85
TNFAIP1-201ENST00000226225 C19orf84I3L1E1 186 aa9.71□□□□□ -0.85
TNFAIP1-201ENST00000226225 CLDN1O95832 211 aa9.71□□□□□ -0.85
TNFAIP1-201ENST00000226225 OR52L2PQ8NGH6 319 aa9.71□□□□□ -0.85
TNFAIP1-201ENST00000226225 IGKV1D-17A0A075B6S4 117 aa9.71□□□□□ -0.86
TNFAIP1-201ENST00000226225 A0A1B0GW64 132 aa9.71□□□□□ -0.86
TNFAIP1-201ENST00000226225 CTXN2P0C2S0 81 aa9.71□□□□□ -0.86
TNFAIP1-201ENST00000226225 VDAC1P21796 283 aa9.71□□□□□ -0.86
TNFAIP1-201ENST00000226225 MDH2P40926 338 aaKnown RBP9.71□□□□□ -0.86
TNFAIP1-201ENST00000226225 PAX9P55771 341 aa9.71□□□□□ -0.86
TNFAIP1-201ENST00000226225 OR51G1Q8NGK1 321 aa9.71□□□□□ -0.86
TNFAIP1-201ENST00000226225 NOL4LQ96MY1 436 aaPredicted RBP9.71□□□□□ -0.86
TNFAIP1-201ENST00000226225 DIRC2Q96SL1 478 aa9.71□□□□□ -0.86
TNFAIP1-201ENST00000226225 FAM103A1Q9BTL3 118 aaKnown RBP9.71□□□□□ -0.86
TNFAIP1-201ENST00000226225 CCDC168Q8NDH2 2452 aa9.7□□□□□ -0.86
TNFAIP1-201ENST00000226225 OOEPA6NGQ2 149 aa9.7□□□□□ -0.86
TNFAIP1-201ENST00000226225 SIAH2O43255 324 aa9.7□□□□□ -0.86
TNFAIP1-201ENST00000226225 TGOLN2O43493 480 aa9.7□□□□□ -0.86
TNFAIP1-201ENST00000226225 NUPR1O60356 82 aa9.7□□□□□ -0.86
TNFAIP1-201ENST00000226225 SPINK4O60575 86 aa9.7□□□□□ -0.86
TNFAIP1-201ENST00000226225 LRTM2Q8N967 370 aa9.7□□□□□ -0.86
TNFAIP1-201ENST00000226225 LEAP2Q969E1 77 aa9.7□□□□□ -0.86
TNFAIP1-201ENST00000226225 VAX2Q9UIW0 290 aa9.7□□□□□ -0.86
TNFAIP1-201ENST00000226225 CHD6Q8TD26 2715 aa9.7□□□□□ -0.86
TNFAIP1-201ENST00000226225 KIAA1324LA8MWY0 1029 aaPredicted RBP9.7□□□□□ -0.86
TNFAIP1-201ENST00000226225 B4DEV8 164 aa9.7□□□□□ -0.86
TNFAIP1-201ENST00000226225 HBZP02008 142 aa9.7□□□□□ -0.86
TNFAIP1-201ENST00000226225 BTF3P20290 206 aaKnown RBP9.7□□□□□ -0.86
TNFAIP1-201ENST00000226225 ZNF672Q499Z4 452 aaPredicted RBP9.7□□□□□ -0.86
TNFAIP1-201ENST00000226225 DMRTA1Q5VZB9 504 aa9.7□□□□□ -0.86
TNFAIP1-201ENST00000226225 FAM53AQ6NSI3 398 aaPredicted RBP9.7□□□□□ -0.86
TNFAIP1-201ENST00000226225 OR13A1Q8NGR1 328 aa9.7□□□□□ -0.86
TNFAIP1-201ENST00000226225 MS4A10Q96PG2 267 aa9.7□□□□□ -0.86
TNFAIP1-201ENST00000226225 OR4C12Q96R67 309 aa9.7□□□□□ -0.86
TNFAIP1-201ENST00000226225 PARLQ9H300 379 aa9.7□□□□□ -0.86
TNFAIP1-201ENST00000226225 SRD5A3Q9H8P0 318 aa9.7□□□□□ -0.86
TNFAIP1-201ENST00000226225 PAGE4O60829 102 aa9.7□□□□□ -0.86
TNFAIP1-201ENST00000226225 CA11O75493 328 aa9.7□□□□□ -0.86
TNFAIP1-201ENST00000226225 RPL23P62829 140 aaKnown RBP9.7□□□□□ -0.86
TNFAIP1-201ENST00000226225 FBXL19-AS1Q494R0 122 aa9.7□□□□□ -0.86
TNFAIP1-201ENST00000226225 TMEM41BQ5BJD5 291 aa9.7□□□□□ -0.86
TNFAIP1-201ENST00000226225 H1FOOQ8IZA3 346 aaPredicted RBP9.7□□□□□ -0.86
TNFAIP1-201ENST00000226225 IMMP2LQ96T52 175 aa9.7□□□□□ -0.86
TNFAIP1-201ENST00000226225 GOLT1BQ9Y3E0 138 aa9.7□□□□□ -0.86
TNFAIP1-201ENST00000226225 LRBAP50851 2863 aa9.7□□□□□ -0.86
TNFAIP1-201ENST00000226225 DOPEY2Q9Y3R5 2298 aa9.69□□□□□ -0.86
TNFAIP1-201ENST00000226225 TRAV34A0A0B4J273 112 aa9.69□□□□□ -0.86
TNFAIP1-201ENST00000226225 NDUFB3O43676 98 aa9.69□□□□□ -0.86
TNFAIP1-201ENST00000226225 UCP3P55916 312 aa9.69□□□□□ -0.86
TNFAIP1-201ENST00000226225 PNRC1Q12796 327 aaPredicted RBP9.69□□□□□ -0.86
TNFAIP1-201ENST00000226225 IQCJQ1A5X6 159 aa9.69□□□□□ -0.86
TNFAIP1-201ENST00000226225 FGFRL1Q8N441 504 aa9.69□□□□□ -0.86
TNFAIP1-201ENST00000226225 OR2T10Q8NGZ9 312 aa9.69□□□□□ -0.86
TNFAIP1-201ENST00000226225 NAT8Q9UHE5 227 aa9.69□□□□□ -0.86
TNFAIP1-201ENST00000226225 USP9YO00507 2555 aaPredicted RBP9.69□□□□□ -0.86
TNFAIP1-201ENST00000226225 TRGV10A0A0A0MS01 117 aa9.69□□□□□ -0.86
TNFAIP1-201ENST00000226225 ODAMA1E959 279 aa9.69□□□□□ -0.86
TNFAIP1-201ENST00000226225 C12orf77C9JDV5 145 aa9.69□□□□□ -0.86
TNFAIP1-201ENST00000226225 MGST3O14880 152 aa9.69□□□□□ -0.86
TNFAIP1-201ENST00000226225 NAPSAO96009 420 aa9.69□□□□□ -0.86
TNFAIP1-201ENST00000226225 IFNA1P01562 189 aa9.69□□□□□ -0.86
TNFAIP1-201ENST00000226225 RAB24Q969Q5 203 aa9.69□□□□□ -0.86
TNFAIP1-201ENST00000226225 SLC25A10Q9UBX3 287 aaPredicted RBP9.69□□□□□ -0.86
TNFAIP1-201ENST00000226225 PSG11Q9UQ72 335 aa9.69□□□□□ -0.86
TNFAIP1-201ENST00000226225 TRAPPC1Q9Y5R8 145 aa9.69□□□□□ -0.86
TNFAIP1-201ENST00000226225 ABCA12Q86UK0 2595 aa9.69□□□□□ -0.86
TNFAIP1-201ENST00000226225 PGLYRP1O75594 196 aaPredicted RBP9.69□□□□□ -0.86
TNFAIP1-201ENST00000226225 GNG10P50151 68 aa9.69□□□□□ -0.86
TNFAIP1-201ENST00000226225 CD81P60033 236 aa9.69□□□□□ -0.86
TNFAIP1-201ENST00000226225 SRPXP78539 464 aa9.69□□□□□ -0.86
TNFAIP1-201ENST00000226225 ID3Q02535 119 aa9.69□□□□□ -0.86
TNFAIP1-201ENST00000226225 OR5I1Q13606 314 aa9.69□□□□□ -0.86
TNFAIP1-201ENST00000226225 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.69□□□□□ -0.863e-6■■■■□ 23.5
TNFAIP1-201ENST00000226225 Q8NFD4 153 aa9.69□□□□□ -0.86
TNFAIP1-201ENST00000226225 TRBV24-1A0A075B6N3 115 aa9.68□□□□□ -0.86
TNFAIP1-201ENST00000226225 IGKV1D-33P01593 117 aa9.68□□□□□ -0.86
TNFAIP1-201ENST00000226225 IGKV1-33P01594 117 aa9.68□□□□□ -0.86
TNFAIP1-201ENST00000226225 COL8A2P25067 703 aa9.68□□□□□ -0.86
TNFAIP1-201ENST00000226225 PSMB3P49720 205 aa9.68□□□□□ -0.86
TNFAIP1-201ENST00000226225 THBS3P49746 956 aa9.68□□□□□ -0.86
TNFAIP1-201ENST00000226225 RPL31P62899 125 aaKnown RBP9.68□□□□□ -0.86
TNFAIP1-201ENST00000226225 MEF2BQ02080 365 aaPredicted RBP9.68□□□□□ -0.86
TNFAIP1-201ENST00000226225 BAXQ07812 192 aa9.68□□□□□ -0.86
TNFAIP1-201ENST00000226225 LRRC10Q5BKY1 277 aa9.68□□□□□ -0.86
TNFAIP1-201ENST00000226225 ZNF497Q6ZNH5 498 aa9.68□□□□□ -0.86
TNFAIP1-201ENST00000226225 TIMD4Q96H15 378 aa9.68□□□□□ -0.86
TNFAIP1-201ENST00000226225 TMEM208Q9BTX3 173 aa9.68□□□□□ -0.86
TNFAIP1-201ENST00000226225 NOTCH3Q9UM47 2321 aa9.68□□□□□ -0.86
TNFAIP1-201ENST00000226225 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms