RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 IGHG2P01859 326 aa21.53■■□□□ 1.04
CHMP4B-201ENST00000217402 ARPC1AQ92747 370 aa21.53■■□□□ 1.04
CHMP4B-201ENST00000217402 FAM103A1Q9BTL3 118 aaKnown RBP21.53■■□□□ 1.04
CHMP4B-201ENST00000217402 PRNDQ9UKY0 176 aa21.53■■□□□ 1.04
CHMP4B-201ENST00000217402 PLXNB1O43157 2135 aa21.52■■□□□ 1.04
CHMP4B-201ENST00000217402 MPTX1A8MV57 137 aa21.52■■□□□ 1.04
CHMP4B-201ENST00000217402 IFNA21P01568 189 aa21.52■■□□□ 1.04
CHMP4B-201ENST00000217402 COMPP49747 757 aaPredicted RBP21.52■■□□□ 1.04
CHMP4B-201ENST00000217402 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP21.52■■□□□ 1.04
CHMP4B-201ENST00000217402 QTRT1Q9BXR0 403 aaKnown RBP21.52■■□□□ 1.04
CHMP4B-201ENST00000217402 COMMD5Q9GZQ3 224 aa21.52■■□□□ 1.04
CHMP4B-201ENST00000217402 FBXO7Q9Y3I1 522 aa21.52■■□□□ 1.04
CHMP4B-201ENST00000217402 OR51B2Q9Y5P1 312 aa21.52■■□□□ 1.04
CHMP4B-201ENST00000217402 ATP6V0E1O15342 81 aa21.51■■□□□ 1.03
CHMP4B-201ENST00000217402 KCNAB3O43448 404 aa21.51■■□□□ 1.03
CHMP4B-201ENST00000217402 TSPAN9O75954 239 aa21.51■■□□□ 1.03
CHMP4B-201ENST00000217402 SULT1A3P0DMM9 295 aa21.51■■□□□ 1.03
CHMP4B-201ENST00000217402 SULT1A4P0DMN0 295 aa21.51■■□□□ 1.03
CHMP4B-201ENST00000217402 MAS1LP35410 378 aa21.51■■□□□ 1.03
CHMP4B-201ENST00000217402 Q8N2B8 174 aa21.51■■□□□ 1.03
CHMP4B-201ENST00000217402 OR2T6Q8NHC8 308 aa21.51■■□□□ 1.03
CHMP4B-201ENST00000217402 SRSF12Q8WXF0 261 aaKnown RBP21.51■■□□□ 1.03
CHMP4B-201ENST00000217402 TMEM14BQ9NUH8 114 aa21.51■■□□□ 1.03
CHMP4B-201ENST00000217402 LINC00527Q9UJ94 153 aa21.51■■□□□ 1.03
CHMP4B-201ENST00000217402 TNCP24821 2201 aa21.51■■□□□ 1.03
CHMP4B-201ENST00000217402 FAM25EA8MYX2 175 aa21.51■■□□□ 1.03
CHMP4B-201ENST00000217402 NXPH3O95157 252 aa21.51■■□□□ 1.03
CHMP4B-201ENST00000217402 C2orf68Q2NKX9 166 aa21.51■■□□□ 1.03
CHMP4B-201ENST00000217402 THOC7Q6I9Y2 204 aaKnown RBP21.51■■□□□ 1.03
CHMP4B-201ENST00000217402 FOXRED2Q8IWF2 684 aa21.51■■□□□ 1.03
CHMP4B-201ENST00000217402 FOXA2Q9Y261 457 aaPredicted RBP21.51■■□□□ 1.03
CHMP4B-201ENST00000217402 VDAC2P45880 294 aaPredicted RBP21.5■■□□□ 1.03
CHMP4B-201ENST00000217402 RPL27AP46776 148 aaKnown RBP21.5■■□□□ 1.03
CHMP4B-201ENST00000217402 SMCO1Q147U7 214 aa21.5■■□□□ 1.03
CHMP4B-201ENST00000217402 NOL4LQ96MY1 436 aaPredicted RBP21.5■■□□□ 1.03
CHMP4B-201ENST00000217402 FYTTD1Q96QD9 318 aaKnown RBP21.5■■□□□ 1.03
CHMP4B-201ENST00000217402 C13orf42A0A1B0GVH6 325 aa21.49■■□□□ 1.03
CHMP4B-201ENST00000217402 E7EUB6 86 aa21.49■■□□□ 1.03
CHMP4B-201ENST00000217402 GOSR2O14653 212 aa21.49■■□□□ 1.03
CHMP4B-201ENST00000217402 APELAP0DMC3 54 aa21.49■■□□□ 1.03
CHMP4B-201ENST00000217402 HINT2Q9BX68 163 aa21.49■■□□□ 1.03
CHMP4B-201ENST00000217402 CTNNBIP1Q9NSA3 81 aaPredicted RBP21.49■■□□□ 1.03
CHMP4B-201ENST00000217402 FKBP11Q9NYL4 201 aa21.49■■□□□ 1.03
CHMP4B-201ENST00000217402 TEX50A0A1B0GTY4 177 aa21.48■■□□□ 1.03
CHMP4B-201ENST00000217402 A0A1B0GU03 582 aa21.48■■□□□ 1.03
CHMP4B-201ENST00000217402 ST8SIA3O43173 380 aa21.48■■□□□ 1.03
CHMP4B-201ENST00000217402 NDUFA7O95182 113 aa21.48■■□□□ 1.03
CHMP4B-201ENST00000217402 FGF2P09038 288 aa21.48■■□□□ 1.03
CHMP4B-201ENST00000217402 OR1S1Q8NH92 325 aa21.48■■□□□ 1.03
CHMP4B-201ENST00000217402 OR10C1Q96KK4 312 aa21.48■■□□□ 1.03
CHMP4B-201ENST00000217402 MSGN1A6NI15 193 aa21.47■■□□□ 1.03
CHMP4B-201ENST00000217402 EGR2P11161 476 aaPredicted RBP21.47■■□□□ 1.03
CHMP4B-201ENST00000217402 ECSCRQ19T08 205 aa21.47■■□□□ 1.03
CHMP4B-201ENST00000217402 SPINK9Q5DT21 86 aa21.47■■□□□ 1.03
CHMP4B-201ENST00000217402 SPIN2AQ99865 258 aa21.47■■□□□ 1.03
CHMP4B-201ENST00000217402 SPIN2BQ9BPZ2 258 aa21.47■■□□□ 1.03
CHMP4B-201ENST00000217402 A0A1B0GW64 132 aa21.47■■□□□ 1.03
CHMP4B-201ENST00000217402 C5orf51A6NDU8 294 aa21.47■■□□□ 1.03
CHMP4B-201ENST00000217402 AP4M1O00189 453 aa21.47■■□□□ 1.03
CHMP4B-201ENST00000217402 IAH1Q2TAA2 248 aaPredicted RBP21.47■■□□□ 1.03
CHMP4B-201ENST00000217402 ZNF429Q86V71 674 aa21.47■■□□□ 1.03
CHMP4B-201ENST00000217402 OR1L8Q8NGR8 309 aa21.47■■□□□ 1.03
CHMP4B-201ENST00000217402 OR5B3Q8NH48 314 aa21.47■■□□□ 1.03
CHMP4B-201ENST00000217402 PDCD10Q9BUL8 212 aa21.47■■□□□ 1.03
CHMP4B-201ENST00000217402 C16orf95Q9H693 158 aa21.47■■□□□ 1.03
CHMP4B-201ENST00000217402 SERTAD4Q9NUC0 356 aa21.47■■□□□ 1.03
CHMP4B-201ENST00000217402 COA4Q9NYJ1 87 aa21.47■■□□□ 1.03
CHMP4B-201ENST00000217402 WSB1Q9Y6I7 421 aa21.47■■□□□ 1.03
CHMP4B-201ENST00000217402 CGB1A6NKQ9 187 aa21.46■■□□□ 1.03
CHMP4B-201ENST00000217402 IFNA17P01571 189 aa21.46■■□□□ 1.03
CHMP4B-201ENST00000217402 HKR1P10072 659 aa21.46■■□□□ 1.03
CHMP4B-201ENST00000217402 KRTAP24-1Q3LI83 254 aa21.46■■□□□ 1.03
CHMP4B-201ENST00000217402 LFNGQ8NES3 379 aa21.46■■□□□ 1.03
CHMP4B-201ENST00000217402 OR4F5Q8NH21 305 aa21.46■■□□□ 1.03
CHMP4B-201ENST00000217402 LINC01006Q8NI28 216 aa21.46■■□□□ 1.03
CHMP4B-201ENST00000217402 ZNF257Q9Y2Q1 563 aa21.46■■□□□ 1.03
CHMP4B-201ENST00000217402 HMX3A6NHT5 357 aa21.45■■□□□ 1.02
CHMP4B-201ENST00000217402 G3V318 75 aa21.45■■□□□ 1.02
CHMP4B-201ENST00000217402 SIX6O95475 246 aa21.45■■□□□ 1.02
CHMP4B-201ENST00000217402 SLC25A6P12236 298 aa21.45■■□□□ 1.02
CHMP4B-201ENST00000217402 HSPE1P61604 102 aaKnown RBP21.45■■□□□ 1.02
CHMP4B-201ENST00000217402 SGMS2Q8NHU3 365 aa21.45■■□□□ 1.02
CHMP4B-201ENST00000217402 MED28Q9H204 178 aa21.45■■□□□ 1.02
CHMP4B-201ENST00000217402 MGAT4CQ9UBM8 478 aa21.45■■□□□ 1.02
CHMP4B-201ENST00000217402 TEX22C9J3V5 150 aa21.44■■□□□ 1.02
CHMP4B-201ENST00000217402 IGF1P05019 195 aa21.44■■□□□ 1.02
CHMP4B-201ENST00000217402 GSG1LQ6UXU4 331 aa21.44■■□□□ 1.02
CHMP4B-201ENST00000217402 Q6ZNX1 250 aa21.44■■□□□ 1.02
CHMP4B-201ENST00000217402 STPG2Q8N412 459 aa21.44■■□□□ 1.02
CHMP4B-201ENST00000217402 OR5M8Q8NGP6 311 aa21.44■■□□□ 1.02
CHMP4B-201ENST00000217402 NDUFA4L2Q9NRX3 87 aa21.44■■□□□ 1.02
CHMP4B-201ENST00000217402 GSKIPQ9P0R6 139 aa21.44■■□□□ 1.02
CHMP4B-201ENST00000217402 PITX3O75364 302 aa21.44■■□□□ 1.02
CHMP4B-201ENST00000217402 TRAPPC2P0DI81 140 aa21.44■■□□□ 1.02
CHMP4B-201ENST00000217402 TRAPPC2BP0DI82 140 aa21.44■■□□□ 1.02
CHMP4B-201ENST00000217402 MDKP21741 143 aaPredicted RBP21.44■■□□□ 1.02
CHMP4B-201ENST00000217402 OR10W1Q8NGF6 305 aa21.44■■□□□ 1.02
CHMP4B-201ENST00000217402 ATRQ13535 2644 aa21.43■■□□□ 1.02
CHMP4B-201ENST00000217402 TRAV41A0A0B4J266 112 aa21.43■■□□□ 1.02
CHMP4B-201ENST00000217402 AARDQ4LEZ3 155 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 158.5 ms