RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 LINC00869P0C866 280 aa11.54□□□□□ -0.56
SIX4-201ENST00000216513 CD69Q07108 199 aa11.54□□□□□ -0.56
SIX4-201ENST00000216513 SURF2Q15527 256 aaPredicted RBP11.54□□□□□ -0.56
SIX4-201ENST00000216513 CLLU1Q5K131 121 aa11.54□□□□□ -0.56
SIX4-201ENST00000216513 WDR82Q6UXN9 313 aa11.54□□□□□ -0.56
SIX4-201ENST00000216513 C1QL2Q7Z5L3 287 aa11.54□□□□□ -0.56
SIX4-201ENST00000216513 OR10S1Q8NGN2 331 aa11.54□□□□□ -0.56
SIX4-201ENST00000216513 TMEM262E9PQX1 116 aa11.54□□□□□ -0.56
SIX4-201ENST00000216513 MSMBP08118 114 aa11.54□□□□□ -0.56
SIX4-201ENST00000216513 PAXXQ9BUH6 204 aa11.54□□□□□ -0.56
SIX4-201ENST00000216513 KIR3DL3Q8N743 410 aa11.53□□□□□ -0.56
SIX4-201ENST00000216513 OR4C46A6NHA9 309 aa11.53□□□□□ -0.56
SIX4-201ENST00000216513 PSMB2P49721 201 aa11.53□□□□□ -0.56
SIX4-201ENST00000216513 DHRS11Q6UWP2 260 aa11.53□□□□□ -0.56
SIX4-201ENST00000216513 RNF114Q9Y508 228 aa11.53□□□□□ -0.56
SIX4-201ENST00000216513 A0A0B4J293 547 aa11.53□□□□□ -0.56
SIX4-201ENST00000216513 FSTP19883 344 aa11.53□□□□□ -0.56
SIX4-201ENST00000216513 FAM3BP58499 235 aaPredicted RBP11.53□□□□□ -0.56
SIX4-201ENST00000216513 AMMECR1LQ6DCA0 310 aa11.53□□□□□ -0.56
SIX4-201ENST00000216513 DMRTA2Q96SC8 542 aa11.53□□□□□ -0.56
SIX4-201ENST00000216513 C12orf77C9JDV5 145 aa11.53□□□□□ -0.56
SIX4-201ENST00000216513 GPX1P07203 203 aa11.53□□□□□ -0.56
SIX4-201ENST00000216513 OPN4Q9UHM6 478 aa11.53□□□□□ -0.56
SIX4-201ENST00000216513 PLXNA3P51805 1871 aa11.53□□□□□ -0.56
SIX4-201ENST00000216513 ATP6V0CP27449 155 aa11.53□□□□□ -0.56
SIX4-201ENST00000216513 TSPOP30536 169 aa11.53□□□□□ -0.56
SIX4-201ENST00000216513 NDUFS8O00217 210 aa11.52□□□□□ -0.56
SIX4-201ENST00000216513 PIN1P1O15428 100 aa11.52□□□□□ -0.56
SIX4-201ENST00000216513 PGLYRP1O75594 196 aaPredicted RBP11.52□□□□□ -0.56
SIX4-201ENST00000216513 IL4P05112 153 aa11.52□□□□□ -0.56
SIX4-201ENST00000216513 MARCH11A6NNE9 402 aa11.52□□□□□ -0.56
SIX4-201ENST00000216513 NBR2O15453 112 aa11.52□□□□□ -0.56
SIX4-201ENST00000216513 TCF21O43680 179 aa11.52□□□□□ -0.56
SIX4-201ENST00000216513 DEFB104AQ8WTQ1 72 aa11.52□□□□□ -0.56
SIX4-201ENST00000216513 MFNGO00587 321 aa11.52□□□□□ -0.57
SIX4-201ENST00000216513 EFNA2O43921 213 aa11.52□□□□□ -0.57
SIX4-201ENST00000216513 UNC119Q13432 240 aa11.52□□□□□ -0.57
SIX4-201ENST00000216513 PAQR4Q8N4S7 273 aaPredicted RBP11.52□□□□□ -0.57
SIX4-201ENST00000216513 SYT8Q8NBV8 401 aa11.52□□□□□ -0.57
SIX4-201ENST00000216513 OR10C1Q96KK4 312 aa11.52□□□□□ -0.57
SIX4-201ENST00000216513 FOXA2Q9Y261 457 aaPredicted RBP11.52□□□□□ -0.57
SIX4-201ENST00000216513 TIMM23O14925 209 aa11.52□□□□□ -0.57
SIX4-201ENST00000216513 H7C2G1 150 aa11.52□□□□□ -0.57
SIX4-201ENST00000216513 CCKARP32238 428 aa11.52□□□□□ -0.57
SIX4-201ENST00000216513 RNF212Q495C1 297 aa11.52□□□□□ -0.57
SIX4-201ENST00000216513 RUSC1-AS1Q66K80 236 aa11.52□□□□□ -0.57
SIX4-201ENST00000216513 HELTA6NFD8 242 aa11.51□□□□□ -0.57
SIX4-201ENST00000216513 MSGN1A6NI15 193 aa11.51□□□□□ -0.57
SIX4-201ENST00000216513 HLA-DQB1P01920 261 aa11.51□□□□□ -0.57
SIX4-201ENST00000216513 TMEM178BH3BS89 294 aa11.51□□□□□ -0.57
SIX4-201ENST00000216513 FGFRL1Q8N441 504 aa11.51□□□□□ -0.57
SIX4-201ENST00000216513 KLHL30-AS1Q8NEE0 82 aa11.51□□□□□ -0.57
SIX4-201ENST00000216513 WBP1Q96G27 269 aa11.51□□□□□ -0.57
SIX4-201ENST00000216513 REG4Q9BYZ8 158 aa11.51□□□□□ -0.57
SIX4-201ENST00000216513 AP4M1O00189 453 aa11.51□□□□□ -0.57
SIX4-201ENST00000216513 LDLRAD2Q5SZI1 272 aa11.51□□□□□ -0.57
SIX4-201ENST00000216513 LINC01590Q5TEZ4 76 aa11.51□□□□□ -0.57
SIX4-201ENST00000216513 MIC13Q5XKP0 118 aa11.51□□□□□ -0.57
SIX4-201ENST00000216513 DEDDO75618 318 aa11.51□□□□□ -0.57
SIX4-201ENST00000216513 KBTBD11O94819 623 aa11.51□□□□□ -0.57
SIX4-201ENST00000216513 P01737 135 aa11.51□□□□□ -0.57
SIX4-201ENST00000216513 HSPE1P61604 102 aaKnown RBP11.51□□□□□ -0.57
SIX4-201ENST00000216513 Q96M66 194 aa11.51□□□□□ -0.57
SIX4-201ENST00000216513 PRO3102Q9H379 93 aa11.51□□□□□ -0.57
SIX4-201ENST00000216513 RBKSQ9H477 322 aa11.51□□□□□ -0.57
SIX4-201ENST00000216513 OR2T8A6NH00 312 aa11.5□□□□□ -0.57
SIX4-201ENST00000216513 H3BQ15 152 aa11.5□□□□□ -0.57
SIX4-201ENST00000216513 NPFFO15130 113 aa11.5□□□□□ -0.57
SIX4-201ENST00000216513 SCGB1D4Q6XE38 83 aa11.5□□□□□ -0.57
SIX4-201ENST00000216513 ZNF430Q9H8G1 570 aaPredicted RBP11.5□□□□□ -0.57
SIX4-201ENST00000216513 ACAA1P09110 424 aaPredicted RBP11.5□□□□□ -0.57
SIX4-201ENST00000216513 DLX6P56179 175 aa11.5□□□□□ -0.57
SIX4-201ENST00000216513 TWIST1Q15672 202 aa11.5□□□□□ -0.57
SIX4-201ENST00000216513 IQCJQ1A5X6 159 aa11.5□□□□□ -0.57
SIX4-201ENST00000216513 FAM90A1Q86YD7 464 aa11.5□□□□□ -0.57
SIX4-201ENST00000216513 ZNF253O75346 499 aa11.5□□□□□ -0.57
SIX4-201ENST00000216513 HIST3H3Q16695 136 aa11.5□□□□□ -0.57
SIX4-201ENST00000216513 DPPA3Q6W0C5 159 aa11.5□□□□□ -0.57
SIX4-201ENST00000216513 CYB561D1Q8N8Q1 229 aa11.5□□□□□ -0.57
SIX4-201ENST00000216513 BDP1A6H8Y1 2624 aa11.5□□□□□ -0.57
SIX4-201ENST00000216513 FBLL1A6NHQ2 334 aaKnown RBP11.5□□□□□ -0.57
SIX4-201ENST00000216513 J3QR89 54 aa11.5□□□□□ -0.57
SIX4-201ENST00000216513 CFDP00746 253 aaPredicted RBP11.5□□□□□ -0.57
SIX4-201ENST00000216513 AMY1AP04745 511 aa11.5□□□□□ -0.57
SIX4-201ENST00000216513 BSXQ3C1V8 233 aa11.5□□□□□ -0.57
SIX4-201ENST00000216513 DUX3Q96PT4 197 aa11.5□□□□□ -0.57
SIX4-201ENST00000216513 LINC01587Q99440 93 aa11.5□□□□□ -0.57
SIX4-201ENST00000216513 ATG101Q9BSB4 218 aa11.5□□□□□ -0.57
SIX4-201ENST00000216513 PAM16Q9Y3D7 125 aa11.5□□□□□ -0.57
SIX4-201ENST00000216513 TTC28Q96AY4 2481 aa11.5□□□□□ -0.57
SIX4-201ENST00000216513 WFDC12Q8WWY7 111 aa11.5□□□□□ -0.57
SIX4-201ENST00000216513 NRGNQ92686 78 aa11.5□□□□□ -0.57
SIX4-201ENST00000216513 KLK15Q9H2R5 256 aa11.5□□□□□ -0.57
SIX4-201ENST00000216513 NPVFQ9HCQ7 196 aa11.5□□□□□ -0.57
SIX4-201ENST00000216513 MOB4Q9Y3A3 225 aa11.5□□□□□ -0.57
SIX4-201ENST00000216513 SHISA3A0PJX4 238 aa11.49□□□□□ -0.57
SIX4-201ENST00000216513 H0Y980 276 aa11.49□□□□□ -0.57
SIX4-201ENST00000216513 ADIPOQQ15848 244 aa11.49□□□□□ -0.57
SIX4-201ENST00000216513 MBNL2Q5VZF2 373 aaKnown RBP11.49□□□□□ -0.57
SIX4-201ENST00000216513 OR4A47Q6IF82 309 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms