RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 NppcQ61839 126 aa9.96□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Pramel5Q7TPY4 500 aa9.96□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Gm10600Q8BQ57 223 aa9.96□□□□□ -0.82
Col9a1-202ENSMUST00000088349 FuomQ8R2K1 153 aa9.96□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Cst6Q9D1B1 149 aa9.96□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Rhebl1Q9D8T3 184 aa9.96□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Mdp1Q9D967 164 aa9.96□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Fzr1Q9R1K5 493 aa9.96□□□□□ -0.82
Col9a1-202ENSMUST00000088349 4931429L15RikE9PVU2 379 aa9.95□□□□□ -0.82
Col9a1-202ENSMUST00000088349 ApodP51910 189 aa9.95□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Srsf6Q3TWW8 339 aaKnown RBP9.95□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Zfp874bQ7M6X2 447 aa9.95□□□□□ -0.82
Col9a1-202ENSMUST00000088349 AI987944Q7TPX5 406 aa9.95□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Fbll1Q80WS3 314 aaKnown RBP9.95□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Exosc2Q8VBV3 293 aaKnown RBP9.95□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Sco2Q8VCL2 255 aa9.95□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Sun5Q9DA32 373 aa9.95□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Suclg1Q9WUM5 346 aaKnown RBP9.95□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Gm36864A0A1Y7VJE6 447 aa9.95□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Trav12-1A0N8R1 115 aa9.95□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Gm20815J3KMI0 227 aa9.95□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Gm20914J3QME2 227 aa9.95□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Ercc1P07903 298 aa9.95□□□□□ -0.82
Col9a1-202ENSMUST00000088349 GrnP28798 589 aaKnown RBP9.95□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Rab1AP62821 205 aa9.95□□□□□ -0.82
Col9a1-202ENSMUST00000088349 ShbgP97497 403 aa9.95□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Gm11110Q3U4K9 109 aa9.95□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Gm5127Q3UQH6 212 aa9.95□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Klk1b21Q61759 261 aa9.95□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Gm21292Q78EE2 227 aa9.95□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Olfr804Q7TRH7 314 aa9.95□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Olfr132Q7TRI8 313 aa9.95□□□□□ -0.82
Col9a1-202ENSMUST00000088349 YbeyQ8CAV0 164 aa9.95□□□□□ -0.82
Col9a1-202ENSMUST00000088349 SpartQ8R1X6 671 aa9.95□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Myct1Q8R411 188 aa9.95□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Fscn3Q9QXW4 498 aa9.95□□□□□ -0.82
Col9a1-202ENSMUST00000088349 PtprbB2RU80 1998 aa9.94□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Igkv14-126A0A075B5K0 117 aa9.94□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Gm28285A0A087WQ54 102 aa9.94□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Olfr1191-ps1A0A1L1STD5 311 aa9.94□□□□□ -0.82
Col9a1-202ENSMUST00000088349 SiglechB7ZMQ6 332 aa9.94□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Fpr2O88536 351 aa9.94□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Cxcl1P12850 96 aa9.94□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Mcpt8P43430 247 aa9.94□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Tsr3Q5HZH2 323 aa9.94□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Olfr11Q60890 313 aa9.94□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Foxb1Q64732 325 aa9.94□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Tmem107Q9CPV0 140 aa9.94□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Hint2Q9D0S9 163 aa9.94□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Adam11Q9R1V4 773 aa9.94□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Gm29049A0A087WSM5 227 aa9.94□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Mn1D3YWE6 1297 aa9.94□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Gm21118J3QPK8 227 aa9.94□□□□□ -0.82
Col9a1-202ENSMUST00000088349 P01798 113 aa9.94□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Evx1P23683 416 aa9.94□□□□□ -0.82
Col9a1-202ENSMUST00000088349 CryzP47199 331 aa9.94□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Clec12bQ149M0 275 aa9.94□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Gm20909Q5FWB5 227 aa9.94□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Gm20852Q5M8R5 227 aa9.94□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Gm20917Q62457 227 aa9.94□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Gm20809Q62458 227 aa9.94□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Gm20865Q62460 227 aa9.94□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Opn5Q6VZZ7 377 aa9.94□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Map6Q7TSJ2 906 aa9.94□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Gm20738Q810R8 227 aa9.94□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Q8BG31 207 aa9.94□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Lrtm1Q8BXQ3 356 aa9.94□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Olfr181Q8VGQ7 317 aa9.94□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Cdc42ep3Q9CQC5 254 aa9.94□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Q9CRC3 126 aa9.94□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Cyc1Q9D0M3 325 aaKnown RBP9.94□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Gm20806Q9D9T3 227 aa9.94□□□□□ -0.82
Col9a1-202ENSMUST00000088349 RprmQ9JJ72 109 aa9.94□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Mnx1Q9QZW9 404 aa9.94□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Ighv5-12A0A075B5Q4 117 aa9.93□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Gm15440D3Z3P4 90 aa9.93□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Ear14F6YUX7 155 aa9.93□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Gm20918J3QN17 227 aa9.93□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Olfr117L7N1Z1 317 aa9.93□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Rnase2O35291 155 aa9.93□□□□□ -0.82
Col9a1-202ENSMUST00000088349 LalbaP29752 143 aa9.93□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Hist1h3aP68433 136 aa9.93□□□□□ -0.82
Col9a1-202ENSMUST00000088349 GalnsQ571E4 520 aa9.93□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Trav8d-2Q5R1B6 112 aa9.93□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Vdac2Q60930 295 aaKnown RBP9.93□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Olfr782Q7TRI2 314 aa9.93□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Olfr504Q7TRU7 318 aa9.93□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Znhit1Q8R331 154 aa9.93□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Pla2g16Q8R3U1 162 aa9.93□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Ntng2Q8R4F1 589 aaKnown RBP9.93□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Olfr130Q8VFC1 317 aa9.93□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Mrpl21Q9D1N9 209 aaKnown RBP9.93□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Q9DAL9 119 aa9.93□□□□□ -0.82
Col9a1-202ENSMUST00000088349 HpgdsQ9JHF7 199 aa9.93□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Cd5lQ9QWK4 352 aa9.93□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Defb3Q9WTL0 63 aa9.93□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Plxnb1Q8CJH3 2119 aa9.93□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Csmd1Q923L3 3564 aa9.93□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Gm3676D3Z236 184 aa9.93□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Vmn1r194J3JS27 296 aa9.93□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 30.4 ms