RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Olfr11Q60890 313 aa13.96□□□□□ -0.17
Trim28-201ENSMUST00000005705 Cd200r5Q8BTP3 270 aa13.96□□□□□ -0.17
Trim28-201ENSMUST00000005705 Gpr84Q8CIM5 396 aa13.96□□□□□ -0.17
Trim28-201ENSMUST00000005705 RhebQ921J2 184 aa13.96□□□□□ -0.17
Trim28-201ENSMUST00000005705 Phf19Q9CXG9 578 aa13.96□□□□□ -0.17
Trim28-201ENSMUST00000005705 Mdp1Q9D967 164 aa13.96□□□□□ -0.17
Trim28-201ENSMUST00000005705 Tcrg-C4A0A075B6C7 190 aa13.96□□□□□ -0.17
Trim28-201ENSMUST00000005705 Trbv5A0A0B4J1G9 113 aa13.96□□□□□ -0.17
Trim28-201ENSMUST00000005705 Olfr785A0A0N4SVC3 312 aa13.96□□□□□ -0.17
Trim28-201ENSMUST00000005705 MiipA2A7Y5 387 aa13.96□□□□□ -0.17
Trim28-201ENSMUST00000005705 Gabrg3P27681 467 aa13.96□□□□□ -0.17
Trim28-201ENSMUST00000005705 Olfr193Q7TS43 309 aa13.96□□□□□ -0.17
Trim28-201ENSMUST00000005705 Q80VP5 184 aa13.96□□□□□ -0.17
Trim28-201ENSMUST00000005705 TskuQ8CBR6 354 aa13.96□□□□□ -0.17
Trim28-201ENSMUST00000005705 Olfr494Q8VG07 314 aa13.96□□□□□ -0.17
Trim28-201ENSMUST00000005705 Zfp958Q99LG7 467 aa13.96□□□□□ -0.17
Trim28-201ENSMUST00000005705 Prok2Q9QXU7 128 aa13.96□□□□□ -0.17
Trim28-201ENSMUST00000005705 Adam11Q9R1V4 773 aa13.96□□□□□ -0.17
Trim28-201ENSMUST00000005705 Rsg1A2A825 258 aa13.96□□□□□ -0.18
Trim28-201ENSMUST00000005705 Aadacl4B1AVU5 407 aa13.96□□□□□ -0.18
Trim28-201ENSMUST00000005705 Ankrd66J3QNN4 192 aa13.96□□□□□ -0.18
Trim28-201ENSMUST00000005705 Gm614Q3V2K1 191 aa13.96□□□□□ -0.18
Trim28-201ENSMUST00000005705 Olfr142Q60881 305 aa13.96□□□□□ -0.18
Trim28-201ENSMUST00000005705 Hspa12aQ8K0U4 675 aa13.96□□□□□ -0.18
Trim28-201ENSMUST00000005705 Olfr1420Q8VF55 309 aa13.96□□□□□ -0.18
Trim28-201ENSMUST00000005705 Olfr1155Q8VFR3 314 aa13.96□□□□□ -0.18
Trim28-201ENSMUST00000005705 Rnf126Q91YL2 313 aa13.96□□□□□ -0.18
Trim28-201ENSMUST00000005705 Syt7Q9R0N7 403 aa13.96□□□□□ -0.18
Trim28-201ENSMUST00000005705 Plxnb1Q8CJH3 2119 aa13.96□□□□□ -0.18
Trim28-201ENSMUST00000005705 Gm14692A2BH01 229 aa13.95□□□□□ -0.18
Trim28-201ENSMUST00000005705 Fabp4P04117 132 aa13.95□□□□□ -0.18
Trim28-201ENSMUST00000005705 H2-DMaP28078 261 aa13.95□□□□□ -0.18
Trim28-201ENSMUST00000005705 LumP51885 338 aa13.95□□□□□ -0.18
Trim28-201ENSMUST00000005705 VegfdP97946 358 aa13.95□□□□□ -0.18
Trim28-201ENSMUST00000005705 Ccl7Q03366 97 aa13.95□□□□□ -0.18
Trim28-201ENSMUST00000005705 Spcs3Q6ZWQ7 180 aa13.95□□□□□ -0.18
Trim28-201ENSMUST00000005705 Mr1Q8HWB0 341 aa13.95□□□□□ -0.18
Trim28-201ENSMUST00000005705 Gas2l1Q8JZP9 678 aa13.95□□□□□ -0.18
Trim28-201ENSMUST00000005705 Poc1aQ8JZX3 405 aa13.95□□□□□ -0.18
Trim28-201ENSMUST00000005705 Atg12Q9CQY1 141 aa13.95□□□□□ -0.18
Trim28-201ENSMUST00000005705 Hnf4gQ9WUU6 408 aa13.95□□□□□ -0.18
Trim28-201ENSMUST00000005705 Frem1Q684R7 2191 aa13.95□□□□□ -0.18
Trim28-201ENSMUST00000005705 Olfr204E9Q8M0 305 aa13.95□□□□□ -0.18
Trim28-201ENSMUST00000005705 Ninj1O70131 152 aa13.95□□□□□ -0.18
Trim28-201ENSMUST00000005705 HhexP43120 271 aa13.95□□□□□ -0.18
Trim28-201ENSMUST00000005705 Hist1h1bP43276 223 aaKnown RBP13.95□□□□□ -0.18
Trim28-201ENSMUST00000005705 CybaQ61462 192 aa13.95□□□□□ -0.18
Trim28-201ENSMUST00000005705 Slc22a27Q76M72 551 aa13.95□□□□□ -0.18
Trim28-201ENSMUST00000005705 Gm13757Q7TR17 305 aa13.95□□□□□ -0.18
Trim28-201ENSMUST00000005705 Scrt2Q8BTH6 311 aa13.95□□□□□ -0.18
Trim28-201ENSMUST00000005705 Tmem234Q8R1E7 140 aa13.95□□□□□ -0.18
Trim28-201ENSMUST00000005705 Q8VCE4 163 aa13.95□□□□□ -0.18
Trim28-201ENSMUST00000005705 Olfr994Q8VF73 314 aa13.95□□□□□ -0.18
Trim28-201ENSMUST00000005705 Prss21Q9JHJ7 324 aa13.95□□□□□ -0.18
Trim28-201ENSMUST00000005705 Olfr1329L7MTV4 313 aa13.94□□□□□ -0.18
Trim28-201ENSMUST00000005705 Chrna7P49582 502 aa13.94□□□□□ -0.18
Trim28-201ENSMUST00000005705 RorcP51450 516 aa13.94□□□□□ -0.18
Trim28-201ENSMUST00000005705 Smad4P97471 551 aa13.94□□□□□ -0.18
Trim28-201ENSMUST00000005705 PhyhiplQ8BGT8 375 aa13.94□□□□□ -0.18
Trim28-201ENSMUST00000005705 Aqp11Q8BHH1 271 aa13.94□□□□□ -0.18
Trim28-201ENSMUST00000005705 Cpne4Q8BLR2 557 aa13.94□□□□□ -0.18
Trim28-201ENSMUST00000005705 Ssxb2Q8C5Z3 165 aa13.94□□□□□ -0.18
Trim28-201ENSMUST00000005705 HpgdsQ9JHF7 199 aa13.94□□□□□ -0.18
Trim28-201ENSMUST00000005705 StrapQ9Z1Z2 350 aaKnown RBP13.94□□□□□ -0.18
Trim28-201ENSMUST00000005705 Mecp2Q9Z2D6 484 aaKnown RBP13.94□□□□□ -0.18
Trim28-201ENSMUST00000005705 Gm4950D3YUM8 205 aa13.94□□□□□ -0.18
Trim28-201ENSMUST00000005705 Hist1h2bmP10854 126 aa13.94□□□□□ -0.18
Trim28-201ENSMUST00000005705 SellP18337 372 aa13.94□□□□□ -0.18
Trim28-201ENSMUST00000005705 Vmn1r181Q0P547 304 aa13.94□□□□□ -0.18
Trim28-201ENSMUST00000005705 Slc25a26Q5U680 274 aa13.94□□□□□ -0.18
Trim28-201ENSMUST00000005705 Lefty1Q64280 368 aa13.94□□□□□ -0.18
Trim28-201ENSMUST00000005705 Hist1h2bhQ64478 126 aa13.94□□□□□ -0.18
Trim28-201ENSMUST00000005705 Hist2h2bbQ64525 126 aa13.94□□□□□ -0.18
Trim28-201ENSMUST00000005705 Zfp975Q6NVD6 525 aa13.94□□□□□ -0.18
Trim28-201ENSMUST00000005705 Hist1h2bcQ6ZWY9 126 aaKnown RBP13.94□□□□□ -0.18
Trim28-201ENSMUST00000005705 Olfr504Q7TRU7 318 aa13.94□□□□□ -0.18
Trim28-201ENSMUST00000005705 Dcaf12Q8BGZ3 453 aa13.94□□□□□ -0.18
Trim28-201ENSMUST00000005705 Phf7Q9DAG9 307 aa13.94□□□□□ -0.18
Trim28-201ENSMUST00000005705 Chek1O35280 476 aa13.94□□□□□ -0.18
Trim28-201ENSMUST00000005705 Col8a2P25318 699 aa13.94□□□□□ -0.18
Trim28-201ENSMUST00000005705 Fosl1P48755 273 aa13.94□□□□□ -0.18
Trim28-201ENSMUST00000005705 GalnsQ571E4 520 aa13.94□□□□□ -0.18
Trim28-201ENSMUST00000005705 Trav8d-2Q5R1B6 112 aa13.94□□□□□ -0.18
Trim28-201ENSMUST00000005705 RflnaQ7TS73 204 aa13.94□□□□□ -0.18
Trim28-201ENSMUST00000005705 Mrps10Q80ZK0 160 aaKnown RBP13.94□□□□□ -0.18
Trim28-201ENSMUST00000005705 Gm26558Q8BLW8 286 aa13.94□□□□□ -0.18
Trim28-201ENSMUST00000005705 Vmn1r178Q8R2B6 304 aa13.94□□□□□ -0.18
Trim28-201ENSMUST00000005705 Slc29a3Q99P65 475 aa13.94□□□□□ -0.18
Trim28-201ENSMUST00000005705 Rtl8cQ9D6I0 112 aa13.94□□□□□ -0.18
Trim28-201ENSMUST00000005705 Cdk20Q9JHU3 346 aa13.94□□□□□ -0.18
Trim28-201ENSMUST00000005705 Olfr117L7N1Z1 317 aa13.93□□□□□ -0.18
Trim28-201ENSMUST00000005705 Hoxa5P09021 270 aa13.93□□□□□ -0.18
Trim28-201ENSMUST00000005705 Lef1P27782 397 aa13.93□□□□□ -0.18
Trim28-201ENSMUST00000005705 ShbgP97497 403 aa13.93□□□□□ -0.18
Trim28-201ENSMUST00000005705 DhhQ61488 396 aa13.93□□□□□ -0.18
Trim28-201ENSMUST00000005705 ZpbpQ62522 350 aa13.93□□□□□ -0.18
Trim28-201ENSMUST00000005705 Foxb1Q64732 325 aa13.93□□□□□ -0.18
Trim28-201ENSMUST00000005705 Fbll1Q80WS3 314 aaKnown RBP13.93□□□□□ -0.18
Trim28-201ENSMUST00000005705 Nmnat2Q8BNJ3 307 aa13.93□□□□□ -0.18
Trim28-201ENSMUST00000005705 Olfr130Q8VFC1 317 aa13.93□□□□□ -0.18
Retrieved 100 of 22,080 RNA–protein pairs in 33.1 ms