RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Galnt14Q8BVG5 550 aa14.07□□□□□ -0.16
Shh-201ENSMUST00000002708 Q8VCE4 163 aa14.07□□□□□ -0.16
Shh-201ENSMUST00000002708 RhebQ921J2 184 aa14.07□□□□□ -0.16
Shh-201ENSMUST00000002708 Ms4a6dQ99N07 247 aa14.07□□□□□ -0.16
Shh-201ENSMUST00000002708 Mrpl21Q9D1N9 209 aaKnown RBP14.07□□□□□ -0.16
Shh-201ENSMUST00000002708 Cd5lQ9QWK4 352 aa14.07□□□□□ -0.16
Shh-201ENSMUST00000002708 Pdcd1lg2Q9WUL5 247 aa14.07□□□□□ -0.16
Shh-201ENSMUST00000002708 Gm45783A0A1B0GT48 74 aa14.07□□□□□ -0.16
Shh-201ENSMUST00000002708 Slc25a53A2AF28 346 aa14.07□□□□□ -0.16
Shh-201ENSMUST00000002708 Olfr773F6VS78 311 aa14.07□□□□□ -0.16
Shh-201ENSMUST00000002708 Olfr417F8VQB1 309 aa14.07□□□□□ -0.16
Shh-201ENSMUST00000002708 Tle3Q08122 772 aaKnown RBP14.07□□□□□ -0.16
Shh-201ENSMUST00000002708 Gm6760Q0ZNK3 87 aa14.07□□□□□ -0.16
Shh-201ENSMUST00000002708 Eif4e1bQ3UTA9 244 aa14.07□□□□□ -0.16
Shh-201ENSMUST00000002708 GalnsQ571E4 520 aa14.07□□□□□ -0.16
Shh-201ENSMUST00000002708 Foxg1Q60987 481 aa14.07□□□□□ -0.16
Shh-201ENSMUST00000002708 Tspan7Q62283 249 aa14.07□□□□□ -0.16
Shh-201ENSMUST00000002708 Wdyhv1Q80WB5 209 aa14.07□□□□□ -0.16
Shh-201ENSMUST00000002708 Olfr772Q8VGC5 311 aa14.07□□□□□ -0.16
Shh-201ENSMUST00000002708 Prb1Q91X93 504 aa14.07□□□□□ -0.16
Shh-201ENSMUST00000002708 Mrpl49Q9CQ40 166 aa14.07□□□□□ -0.16
Shh-201ENSMUST00000002708 Fbxl17Q9QZN1 701 aa14.07□□□□□ -0.16
Shh-201ENSMUST00000002708 Gm15440D3Z3P4 90 aa14.06□□□□□ -0.16
Shh-201ENSMUST00000002708 Gm16519F8VQK7 162 aa14.06□□□□□ -0.16
Shh-201ENSMUST00000002708 Pdcd6P12815 191 aaKnown RBP14.06□□□□□ -0.16
Shh-201ENSMUST00000002708 Mcpt8P43430 247 aa14.06□□□□□ -0.16
Shh-201ENSMUST00000002708 UbdP63072 162 aa14.06□□□□□ -0.16
Shh-201ENSMUST00000002708 Olfr782Q7TRI2 314 aa14.06□□□□□ -0.16
Shh-201ENSMUST00000002708 Olfr193Q7TS43 309 aa14.06□□□□□ -0.16
Shh-201ENSMUST00000002708 Vgll4Q80V24 287 aa14.06□□□□□ -0.16
Shh-201ENSMUST00000002708 Q80W69 301 aa14.06□□□□□ -0.16
Shh-201ENSMUST00000002708 Cpne4Q8BLR2 557 aa14.06□□□□□ -0.16
Shh-201ENSMUST00000002708 Olfr1412Q8VET3 321 aa14.06□□□□□ -0.16
Shh-201ENSMUST00000002708 Dok5Q91ZM9 306 aa14.06□□□□□ -0.16
Shh-201ENSMUST00000002708 Cst6Q9D1B1 149 aa14.06□□□□□ -0.16
Shh-201ENSMUST00000002708 Prss8Q9ESD1 342 aa14.06□□□□□ -0.16
Shh-201ENSMUST00000002708 Olfr159Q9QZ19 319 aa14.06□□□□□ -0.16
Shh-201ENSMUST00000002708 Suclg1Q9WUM5 346 aaKnown RBP14.06□□□□□ -0.16
Shh-201ENSMUST00000002708 SpenQ62504 3644 aaKnown RBP14.06□□□□□ -0.16
Shh-201ENSMUST00000002708 Ighv1-76A0A0G2JFE9 117 aa14.06□□□□□ -0.16
Shh-201ENSMUST00000002708 Gm39566A0A1B0GT45 1251 aa14.06□□□□□ -0.16
Shh-201ENSMUST00000002708 LepP41160 167 aa14.06□□□□□ -0.16
Shh-201ENSMUST00000002708 Defb28Q3V2L0 89 aa14.06□□□□□ -0.16
Shh-201ENSMUST00000002708 Abhd17bQ7M759 288 aa14.06□□□□□ -0.16
Shh-201ENSMUST00000002708 Olfr1000Q7TR99 314 aa14.06□□□□□ -0.16
Shh-201ENSMUST00000002708 Olfr921Q7TRC0 313 aa14.06□□□□□ -0.16
Shh-201ENSMUST00000002708 Olfr1420Q8VF55 309 aa14.06□□□□□ -0.16
Shh-201ENSMUST00000002708 Olfr494Q8VG07 314 aa14.06□□□□□ -0.16
Shh-201ENSMUST00000002708 Olfr339Q8VGK8 309 aa14.06□□□□□ -0.16
Shh-201ENSMUST00000002708 Mrpl41Q9CQN7 135 aaKnown RBP14.06□□□□□ -0.16
Shh-201ENSMUST00000002708 Plekha2Q9ERS5 425 aa14.06□□□□□ -0.16
Shh-201ENSMUST00000002708 Igkv13-85A0A075B666 115 aa14.05□□□□□ -0.16
Shh-201ENSMUST00000002708 Trbv5A0A0B4J1G9 113 aa14.05□□□□□ -0.16
Shh-201ENSMUST00000002708 Fkbp8O35465 402 aa14.05□□□□□ -0.16
Shh-201ENSMUST00000002708 Bloc1s1O55102 125 aa14.05□□□□□ -0.16
Shh-201ENSMUST00000002708 Cxcl1P12850 96 aa14.05□□□□□ -0.16
Shh-201ENSMUST00000002708 H2-DMaP28078 261 aa14.05□□□□□ -0.16
Shh-201ENSMUST00000002708 Gsc2P56916 198 aa14.05□□□□□ -0.16
Shh-201ENSMUST00000002708 Ube2kP61087 200 aa14.05□□□□□ -0.16
Shh-201ENSMUST00000002708 Pcbd1P61458 104 aa14.05□□□□□ -0.16
Shh-201ENSMUST00000002708 Bcl2l2P70345 193 aa14.05□□□□□ -0.16
Shh-201ENSMUST00000002708 Pramel5Q7TPY4 500 aa14.05□□□□□ -0.16
Shh-201ENSMUST00000002708 Rhebl1Q9D8T3 184 aa14.05□□□□□ -0.16
Shh-201ENSMUST00000002708 Ctag2Q9D9S4 219 aa14.05□□□□□ -0.16
Shh-201ENSMUST00000002708 Gm14692A2BH01 229 aa14.05□□□□□ -0.16
Shh-201ENSMUST00000002708 Olfr102B2RT33 308 aa14.05□□□□□ -0.16
Shh-201ENSMUST00000002708 Olfr62L7MU75 315 aa14.05□□□□□ -0.16
Shh-201ENSMUST00000002708 Cr2P19070 1025 aa14.05□□□□□ -0.16
Shh-201ENSMUST00000002708 Gdf1P20863 357 aa14.05□□□□□ -0.16
Shh-201ENSMUST00000002708 Crispld2Q8BZQ2 495 aa14.05□□□□□ -0.16
Shh-201ENSMUST00000002708 Olfr435Q8VFS3 313 aa14.05□□□□□ -0.16
Shh-201ENSMUST00000002708 Olfr101Q920Z0 308 aa14.05□□□□□ -0.16
Shh-201ENSMUST00000002708 Hdhd3Q9CYW4 251 aa14.05□□□□□ -0.16
Shh-201ENSMUST00000002708 Sval1Q9D2X6 151 aa14.05□□□□□ -0.16
Shh-201ENSMUST00000002708 SiglechB7ZMQ6 332 aa14.05□□□□□ -0.16
Shh-201ENSMUST00000002708 Olfr555E9Q547 315 aa14.05□□□□□ -0.16
Shh-201ENSMUST00000002708 Arf1P84078 181 aa14.05□□□□□ -0.16
Shh-201ENSMUST00000002708 Usf2Q64705 346 aaKnown RBP14.05□□□□□ -0.16
Shh-201ENSMUST00000002708 Dirc2Q8BFQ6 478 aa14.05□□□□□ -0.16
Shh-201ENSMUST00000002708 Olfr1298Q8VGE6 312 aa14.05□□□□□ -0.16
Shh-201ENSMUST00000002708 Zfp958Q99LG7 467 aa14.05□□□□□ -0.16
Shh-201ENSMUST00000002708 Fbln5Q9WVH9 448 aa14.05□□□□□ -0.16
Shh-201ENSMUST00000002708 Ighv1-67A0A0G2JFN9 117 aa14.04□□□□□ -0.16
Shh-201ENSMUST00000002708 Gm5890A0A140LI04 305 aa14.04□□□□□ -0.16
Shh-201ENSMUST00000002708 Olfr1191-ps1A0A1L1STD5 311 aa14.04□□□□□ -0.16
Shh-201ENSMUST00000002708 Sc5dO88822 299 aa14.04□□□□□ -0.16
Shh-201ENSMUST00000002708 Ccr2P51683 373 aa14.04□□□□□ -0.16
Shh-201ENSMUST00000002708 Dlx4P70436 240 aa14.04□□□□□ -0.16
Shh-201ENSMUST00000002708 CybaQ61462 192 aa14.04□□□□□ -0.16
Shh-201ENSMUST00000002708 Gm10600Q8BQ57 223 aa14.04□□□□□ -0.16
Shh-201ENSMUST00000002708 Vps13cQ8BX70 3748 aa14.04□□□□□ -0.16
Shh-201ENSMUST00000002708 Mef2cQ8CFN5 474 aa14.04□□□□□ -0.16
Shh-201ENSMUST00000002708 FuomQ8R2K1 153 aa14.04□□□□□ -0.16
Shh-201ENSMUST00000002708 Golt1aQ9DCQ3 133 aa14.04□□□□□ -0.16
Shh-201ENSMUST00000002708 RprmQ9JJ72 109 aa14.04□□□□□ -0.16
Shh-201ENSMUST00000002708 Olfr913E9Q716 312 aa14.04□□□□□ -0.16
Shh-201ENSMUST00000002708 Gm20815J3KMI0 227 aa14.04□□□□□ -0.16
Shh-201ENSMUST00000002708 Gm20914J3QME2 227 aa14.04□□□□□ -0.16
Shh-201ENSMUST00000002708 Fgf8P37237 268 aa14.04□□□□□ -0.16
Shh-201ENSMUST00000002708 CamlgP49070 294 aa14.04□□□□□ -0.16
Retrieved 100 of 22,080 RNA–protein pairs in 52.3 ms