RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 DUX5Q96PT3 197 aa13.95□□□□□ -0.18
PHGDH-230ENST00000641927 CLCC1Q96S66 551 aa13.95□□□□□ -0.18
PHGDH-230ENST00000641927 PDCD10Q9BUL8 212 aa13.95□□□□□ -0.18
PHGDH-230ENST00000641927 RANBP3Q9H6Z4 567 aaPredicted RBP13.95□□□□□ -0.18
PHGDH-230ENST00000641927 TPSG1Q9NRR2 321 aa13.95□□□□□ -0.18
PHGDH-230ENST00000641927 CACNG5Q9UF02 275 aa13.95□□□□□ -0.18
PHGDH-230ENST00000641927 NSG2Q9Y328 171 aa13.95□□□□□ -0.18
PHGDH-230ENST00000641927 TRAV3A0A0B4J244 114 aa13.95□□□□□ -0.18
PHGDH-230ENST00000641927 A6NDX4 124 aa13.95□□□□□ -0.18
PHGDH-230ENST00000641927 SNAPC5O75971 98 aa13.95□□□□□ -0.18
PHGDH-230ENST00000641927 KBTBD11O94819 623 aa13.95□□□□□ -0.18
PHGDH-230ENST00000641927 SPDEFO95238 335 aa13.95□□□□□ -0.18
PHGDH-230ENST00000641927 OR9G9P0C7N8 305 aa13.95□□□□□ -0.18
PHGDH-230ENST00000641927 CXCL3P19876 107 aa13.95□□□□□ -0.18
PHGDH-230ENST00000641927 IAH1Q2TAA2 248 aaPredicted RBP13.95□□□□□ -0.18
PHGDH-230ENST00000641927 NPBQ8NG41 125 aa13.95□□□□□ -0.18
PHGDH-230ENST00000641927 OR11H7Q8NGC8 314 aa13.95□□□□□ -0.18
PHGDH-230ENST00000641927 OR8H1Q8NGG4 311 aa13.95□□□□□ -0.18
PHGDH-230ENST00000641927 OR5M8Q8NGP6 311 aa13.95□□□□□ -0.18
PHGDH-230ENST00000641927 OR4A16Q8NH70 328 aa13.95□□□□□ -0.18
PHGDH-230ENST00000641927 PPP1R14BQ96C90 147 aa13.95□□□□□ -0.18
PHGDH-230ENST00000641927 BET1LQ9NYM9 111 aa13.95□□□□□ -0.18
PHGDH-230ENST00000641927 GSKIPQ9P0R6 139 aa13.95□□□□□ -0.18
PHGDH-230ENST00000641927 OR2F2O95006 317 aa13.94□□□□□ -0.18
PHGDH-230ENST00000641927 SULT1A3P0DMM9 295 aa13.94□□□□□ -0.18
PHGDH-230ENST00000641927 SULT1A4P0DMN0 295 aa13.94□□□□□ -0.18
PHGDH-230ENST00000641927 OR2B8PP59922 312 aa13.94□□□□□ -0.18
PHGDH-230ENST00000641927 Q6ZRM9 215 aa13.94□□□□□ -0.18
PHGDH-230ENST00000641927 PUSL1Q8N0Z8 303 aaKnown RBP13.94□□□□□ -0.18
PHGDH-230ENST00000641927 TEX45Q8NA69 505 aa13.94□□□□□ -0.18
PHGDH-230ENST00000641927 OR10C1Q96KK4 312 aa13.94□□□□□ -0.18
PHGDH-230ENST00000641927 SPIN2AQ99865 258 aa13.94□□□□□ -0.18
PHGDH-230ENST00000641927 SPIN2BQ9BPZ2 258 aa13.94□□□□□ -0.18
PHGDH-230ENST00000641927 NEURL2Q9BR09 285 aa13.94□□□□□ -0.18
PHGDH-230ENST00000641927 CHIAQ9BZP6 476 aa13.94□□□□□ -0.18
PHGDH-230ENST00000641927 PLSCR3Q9NRY6 295 aa13.94□□□□□ -0.18
PHGDH-230ENST00000641927 VPREB3Q9UKI3 123 aa13.94□□□□□ -0.18
PHGDH-230ENST00000641927 SIGLEC9Q9Y336 463 aa13.94□□□□□ -0.18
PHGDH-230ENST00000641927 NXPH3O95157 252 aa13.93□□□□□ -0.18
PHGDH-230ENST00000641927 NDUFA3O95167 84 aa13.93□□□□□ -0.18
PHGDH-230ENST00000641927 P0C879 139 aa13.93□□□□□ -0.18
PHGDH-230ENST00000641927 SMCO1Q147U7 214 aa13.93□□□□□ -0.18
PHGDH-230ENST00000641927 C5orf64Q2M2E5 130 aa13.93□□□□□ -0.18
PHGDH-230ENST00000641927 PPP1R27Q86WC6 154 aa13.93□□□□□ -0.18
PHGDH-230ENST00000641927 OR1S1Q8NH92 325 aa13.93□□□□□ -0.18
PHGDH-230ENST00000641927 RASL11BQ9BPW5 248 aa13.93□□□□□ -0.18
PHGDH-230ENST00000641927 MOB4Q9Y3A3 225 aa13.93□□□□□ -0.18
PHGDH-230ENST00000641927 MAST4O15021 2626 aa13.93□□□□□ -0.18
PHGDH-230ENST00000641927 A0A1B0GU03 582 aa13.92□□□□□ -0.18
PHGDH-230ENST00000641927 HMX3A6NHT5 357 aa13.92□□□□□ -0.18
PHGDH-230ENST00000641927 UPK2O00526 184 aa13.92□□□□□ -0.18
PHGDH-230ENST00000641927 TRAPPC2P0DI81 140 aa13.92□□□□□ -0.18
PHGDH-230ENST00000641927 TRAPPC2BP0DI82 140 aa13.92□□□□□ -0.18
PHGDH-230ENST00000641927 H2BFSP57053 126 aa13.92□□□□□ -0.18
PHGDH-230ENST00000641927 GNB1P62873 340 aa13.92□□□□□ -0.18
PHGDH-230ENST00000641927 PJVKQ0ZLH3 352 aa13.92□□□□□ -0.18
PHGDH-230ENST00000641927 OR4A5Q8NH83 315 aa13.92□□□□□ -0.18
PHGDH-230ENST00000641927 TMEM167AQ8TBQ9 72 aa13.92□□□□□ -0.18
PHGDH-230ENST00000641927 ZNF418Q8TF45 676 aaPredicted RBP13.92□□□□□ -0.18
PHGDH-230ENST00000641927 POMT1Q9Y6A1 747 aa13.92□□□□□ -0.18
PHGDH-230ENST00000641927 MTORP42345 2549 aa13.92□□□□□ -0.18
PHGDH-230ENST00000641927 CHST1O43916 411 aa13.91□□□□□ -0.18
PHGDH-230ENST00000641927 CRLF1O75462 422 aa13.91□□□□□ -0.18
PHGDH-230ENST00000641927 CRYGBP07316 175 aa13.91□□□□□ -0.18
PHGDH-230ENST00000641927 FAM157CP0CG43 387 aa13.91□□□□□ -0.18
PHGDH-230ENST00000641927 HLA-GP17693 338 aa13.91□□□□□ -0.18
PHGDH-230ENST00000641927 RPL8P62917 257 aaKnown RBP13.91□□□□□ -0.18
PHGDH-230ENST00000641927 RELBQ01201 579 aa13.91□□□□□ -0.18
PHGDH-230ENST00000641927 TUSC1Q2TAM9 212 aa13.91□□□□□ -0.18
PHGDH-230ENST00000641927 FAM71E2Q8N5Q1 922 aa13.91□□□□□ -0.18
PHGDH-230ENST00000641927 Q8N9W7 124 aa13.91□□□□□ -0.18
PHGDH-230ENST00000641927 ZNF430Q9H8G1 570 aaPredicted RBP13.91□□□□□ -0.18
PHGDH-230ENST00000641927 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.91□□□□□ -0.18
PHGDH-230ENST00000641927 DNAJC9-AS1A6NH13 148 aa13.91□□□□□ -0.18
PHGDH-230ENST00000641927 ACTL6BO94805 426 aa13.91□□□□□ -0.18
PHGDH-230ENST00000641927 SCGB1D2O95969 90 aa13.91□□□□□ -0.18
PHGDH-230ENST00000641927 OPN1MWP04001 364 aa13.91□□□□□ -0.18
PHGDH-230ENST00000641927 OPN1MW2P0DN77 364 aa13.91□□□□□ -0.18
PHGDH-230ENST00000641927 OPN1MW3P0DN78 364 aa13.91□□□□□ -0.18
PHGDH-230ENST00000641927 CD83Q01151 205 aa13.91□□□□□ -0.18
PHGDH-230ENST00000641927 TNXAQ16473 311 aa13.91□□□□□ -0.18
PHGDH-230ENST00000641927 PRSS8Q16651 343 aa13.91□□□□□ -0.18
PHGDH-230ENST00000641927 C16orf82Q7Z2V1 217 aa13.91□□□□□ -0.18
PHGDH-230ENST00000641927 AKAP14Q86UN6 197 aa13.91□□□□□ -0.18
PHGDH-230ENST00000641927 MMD2Q8IY49 270 aa13.91□□□□□ -0.18
PHGDH-230ENST00000641927 C5orf56Q8N8D9 126 aa13.91□□□□□ -0.18
PHGDH-230ENST00000641927 ZBTB8BQ8NAP8 495 aaPredicted RBP13.91□□□□□ -0.18
PHGDH-230ENST00000641927 C2orf50Q96LR7 162 aa13.91□□□□□ -0.18
PHGDH-230ENST00000641927 QTRT1Q9BXR0 403 aaKnown RBP13.91□□□□□ -0.18
PHGDH-230ENST00000641927 ZNF436Q9C0F3 470 aaPredicted RBP13.91□□□□□ -0.18
PHGDH-230ENST00000641927 PRNDQ9UKY0 176 aa13.91□□□□□ -0.18
PHGDH-230ENST00000641927 SH2D7A6NKC9 451 aaPredicted RBP13.9□□□□□ -0.18
PHGDH-230ENST00000641927 C15orf61A6NNL5 157 aa13.9□□□□□ -0.18
PHGDH-230ENST00000641927 FCN1O00602 326 aa13.9□□□□□ -0.18
PHGDH-230ENST00000641927 CA2P00918 260 aa13.9□□□□□ -0.18
PHGDH-230ENST00000641927 IL6RP08887 468 aaPredicted RBP13.9□□□□□ -0.18
PHGDH-230ENST00000641927 SLC25A6P12236 298 aa13.9□□□□□ -0.18
PHGDH-230ENST00000641927 TMEM86BQ8N661 226 aa13.9□□□□□ -0.18
PHGDH-230ENST00000641927 COMMD5Q9GZQ3 224 aa13.9□□□□□ -0.18
PHGDH-230ENST00000641927 OR51B2Q9Y5P1 312 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms