RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 POU2AF1Q16633 256 aa10.59□□□□□ -0.71
PHGDH-221ENST00000641573 TMEM177Q53S58 311 aa10.59□□□□□ -0.71
PHGDH-221ENST00000641573 TPTE2P1Q5T6R2 138 aa10.59□□□□□ -0.71
PHGDH-221ENST00000641573 PDPNQ86YL7 162 aa10.59□□□□□ -0.71
PHGDH-221ENST00000641573 PDZD9Q8IXQ8 264 aa10.59□□□□□ -0.71
PHGDH-221ENST00000641573 MAPK1IP1LQ8NDC0 245 aa10.59□□□□□ -0.71
PHGDH-221ENST00000641573 LHX4Q969G2 390 aa10.59□□□□□ -0.71
PHGDH-221ENST00000641573 RPEQ96AT9 228 aa10.59□□□□□ -0.71
PHGDH-221ENST00000641573 TBX15Q96SF7 602 aa10.59□□□□□ -0.71
PHGDH-221ENST00000641573 DPM3Q9P2X0 92 aa10.59□□□□□ -0.71
PHGDH-221ENST00000641573 WASHC3Q9Y3C0 194 aa10.59□□□□□ -0.71
PHGDH-221ENST00000641573 INSIG2Q9Y5U4 225 aa10.59□□□□□ -0.71
PHGDH-221ENST00000641573 DOCK11Q5JSL3 2073 aa10.59□□□□□ -0.71
PHGDH-221ENST00000641573 IGHV1-3A0A0C4DH29 117 aa10.58□□□□□ -0.72
PHGDH-221ENST00000641573 A0A1W2PRD5 423 aa10.58□□□□□ -0.72
PHGDH-221ENST00000641573 A0A1W2PRF3 423 aa10.58□□□□□ -0.72
PHGDH-221ENST00000641573 A0A1W2PRM7 423 aa10.58□□□□□ -0.72
PHGDH-221ENST00000641573 RNASEK-C17orf49H0YIS7 233 aa10.58□□□□□ -0.72
PHGDH-221ENST00000641573 SHOXO15266 292 aa10.58□□□□□ -0.72
PHGDH-221ENST00000641573 SYNGR2O43760 224 aa10.58□□□□□ -0.72
PHGDH-221ENST00000641573 RBMXL2O75526 392 aaKnown RBP10.58□□□□□ -0.72
PHGDH-221ENST00000641573 FAM157CP0CG43 387 aa10.58□□□□□ -0.72
PHGDH-221ENST00000641573 RAB13P51153 203 aa10.58□□□□□ -0.72
PHGDH-221ENST00000641573 OR4A47Q6IF82 309 aa10.58□□□□□ -0.72
PHGDH-221ENST00000641573 MOB3BQ86TA1 216 aa10.58□□□□□ -0.72
PHGDH-221ENST00000641573 OR8H1Q8NGG4 311 aa10.58□□□□□ -0.72
PHGDH-221ENST00000641573 OR4A16Q8NH70 328 aa10.58□□□□□ -0.72
PHGDH-221ENST00000641573 OSR1Q8TAX0 266 aaPredicted RBP10.58□□□□□ -0.72
PHGDH-221ENST00000641573 FLYWCH2Q96CP2 140 aaKnown RBP10.58□□□□□ -0.72
PHGDH-221ENST00000641573 RHOVQ96L33 236 aa10.58□□□□□ -0.72
PHGDH-221ENST00000641573 RAB40CQ96S21 281 aa10.58□□□□□ -0.72
PHGDH-221ENST00000641573 ARPC5LQ9BPX5 153 aa10.58□□□□□ -0.72
PHGDH-221ENST00000641573 AIFM2Q9BRQ8 373 aa10.58□□□□□ -0.72
PHGDH-221ENST00000641573 QTRT1Q9BXR0 403 aaKnown RBP10.58□□□□□ -0.72
PHGDH-221ENST00000641573 RBKSQ9H477 322 aa10.58□□□□□ -0.72
PHGDH-221ENST00000641573 HSPB7Q9UBY9 170 aa10.58□□□□□ -0.72
PHGDH-221ENST00000641573 CUBNO60494 3623 aa10.58□□□□□ -0.72
PHGDH-221ENST00000641573 IGHV3-72A0A0B4J1Y9 119 aa10.57□□□□□ -0.72
PHGDH-221ENST00000641573 TRAV3A0A0B4J244 114 aa10.57□□□□□ -0.72
PHGDH-221ENST00000641573 FAM24AA6NFZ4 105 aa10.57□□□□□ -0.72
PHGDH-221ENST00000641573 SRRM4A7MD48 611 aaKnown RBP10.57□□□□□ -0.72
PHGDH-221ENST00000641573 RGS13O14921 159 aa10.57□□□□□ -0.72
PHGDH-221ENST00000641573 CD5LO43866 347 aa10.57□□□□□ -0.72
PHGDH-221ENST00000641573 MED6O75586 246 aa10.57□□□□□ -0.72
PHGDH-221ENST00000641573 TMEM50AO95807 157 aa10.57□□□□□ -0.72
PHGDH-221ENST00000641573 IAPPP10997 89 aa10.57□□□□□ -0.72
PHGDH-221ENST00000641573 CEACAM3P40198 252 aa10.57□□□□□ -0.72
PHGDH-221ENST00000641573 PAX9P55771 341 aa10.57□□□□□ -0.72
PHGDH-221ENST00000641573 OR2B8PP59922 312 aa10.57□□□□□ -0.72
PHGDH-221ENST00000641573 RPS16P62249 146 aaKnown RBP10.57□□□□□ -0.72
PHGDH-221ENST00000641573 RPL23AP62750 156 aaKnown RBP10.57□□□□□ -0.72
PHGDH-221ENST00000641573 RELBQ01201 579 aa10.57□□□□□ -0.72
PHGDH-221ENST00000641573 PAX8Q06710 450 aa10.57□□□□□ -0.72
PHGDH-221ENST00000641573 TNFRSF9Q07011 255 aa10.57□□□□□ -0.72
PHGDH-221ENST00000641573 KRTAP24-1Q3LI83 254 aa10.57□□□□□ -0.72
PHGDH-221ENST00000641573 LDLRAD2Q5SZI1 272 aa10.57□□□□□ -0.72
PHGDH-221ENST00000641573 GPR157Q5UAW9 335 aa10.57□□□□□ -0.72
PHGDH-221ENST00000641573 OR2C3Q8N628 320 aa10.57□□□□□ -0.72
PHGDH-221ENST00000641573 HARBI1Q96MB7 349 aa10.57□□□□□ -0.72
PHGDH-221ENST00000641573 UPK2O00526 184 aa10.56□□□□□ -0.72
PHGDH-221ENST00000641573 IL6RP08887 468 aaPredicted RBP10.56□□□□□ -0.72
PHGDH-221ENST00000641573 CAV2P51636 162 aa10.56□□□□□ -0.72
PHGDH-221ENST00000641573 UBE2KP61086 200 aa10.56□□□□□ -0.72
PHGDH-221ENST00000641573 AARDQ4LEZ3 155 aa10.56□□□□□ -0.72
PHGDH-221ENST00000641573 MINOS1Q5TGZ0 78 aa10.56□□□□□ -0.72
PHGDH-221ENST00000641573 LHFPL4Q7Z7J7 247 aa10.56□□□□□ -0.72
PHGDH-221ENST00000641573 SLC51BQ86UW2 128 aa10.56□□□□□ -0.72
PHGDH-221ENST00000641573 OR4C13Q8NGP0 309 aa10.56□□□□□ -0.72
PHGDH-221ENST00000641573 BSCL2Q96G97 398 aaPredicted RBP10.56□□□□□ -0.72
PHGDH-221ENST00000641573 SMIM8Q96KF7 97 aa10.56□□□□□ -0.72
PHGDH-221ENST00000641573 C19orf24Q9BVV8 132 aa10.56□□□□□ -0.72
PHGDH-221ENST00000641573 REG4Q9BYZ8 158 aa10.56□□□□□ -0.72
PHGDH-221ENST00000641573 MS4A7Q9GZW8 240 aaPredicted RBP10.56□□□□□ -0.72
PHGDH-221ENST00000641573 SLC25A31Q9H0C2 315 aa10.56□□□□□ -0.72
PHGDH-221ENST00000641573 LYRM2Q9NU23 88 aaPredicted RBP10.56□□□□□ -0.72
PHGDH-221ENST00000641573 CDC42EP3Q9UKI2 254 aa10.56□□□□□ -0.72
PHGDH-221ENST00000641573 MINOS1-NBL1R4GNA1 71 aa10.56□□□□□ -0.72
PHGDH-221ENST00000641573 ANK3Q12955 4377 aaKnown RBP10.56□□□□□ -0.72
PHGDH-221ENST00000641573 ARHGAP32A7KAX9 2087 aa10.56□□□□□ -0.72
PHGDH-221ENST00000641573 A0A096LNT2 108 aa10.55□□□□□ -0.72
PHGDH-221ENST00000641573 A0A1W2PPI3 338 aa10.55□□□□□ -0.72
PHGDH-221ENST00000641573 IGSF23A1L1A6 192 aa10.55□□□□□ -0.72
PHGDH-221ENST00000641573 C15orf61A6NNL5 157 aa10.55□□□□□ -0.72
PHGDH-221ENST00000641573 IFNA17P01571 189 aa10.55□□□□□ -0.72
PHGDH-221ENST00000641573 MSMBP08118 114 aa10.55□□□□□ -0.72
PHGDH-221ENST00000641573 SAA1P0DJI8 122 aaPredicted RBP10.55□□□□□ -0.72
PHGDH-221ENST00000641573 UBE2E1P51965 193 aa10.55□□□□□ -0.72
PHGDH-221ENST00000641573 LGALS4P56470 323 aa10.55□□□□□ -0.72
PHGDH-221ENST00000641573 UBA52P62987 128 aaKnown RBP10.55□□□□□ -0.72
PHGDH-221ENST00000641573 EWSR1Q01844 656 aaKnown RBP eCLIP10.55□□□□□ -0.72
PHGDH-221ENST00000641573 TEX261Q6UWH6 196 aa10.55□□□□□ -0.72
PHGDH-221ENST00000641573 PUSL1Q8N0Z8 303 aaKnown RBP10.55□□□□□ -0.72
PHGDH-221ENST00000641573 TMEM252Q8N6L7 170 aa10.55□□□□□ -0.72
PHGDH-221ENST00000641573 OR52E5Q8NH55 327 aa10.55□□□□□ -0.72
PHGDH-221ENST00000641573 C1orf159Q96HA4 380 aa10.55□□□□□ -0.72
PHGDH-221ENST00000641573 ZNF471Q9BX82 626 aaPredicted RBP10.55□□□□□ -0.72
PHGDH-221ENST00000641573 CYTL1Q9NRR1 136 aa10.55□□□□□ -0.72
PHGDH-221ENST00000641573 BET1LQ9NYM9 111 aa10.55□□□□□ -0.72
PHGDH-221ENST00000641573 PSENENQ9NZ42 101 aa10.55□□□□□ -0.72
PHGDH-221ENST00000641573 FBXL17Q9UF56 701 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms