RNA–Protein interactions for RNA: ENST00000638375.1

HLA-A-209, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 975 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-209ENST00000638375 TMEM140Q9NV12 185 aa15.33■□□□□ 0.04
HLA-A-209ENST00000638375 KCNIP3Q9Y2W7 256 aa15.33■□□□□ 0.04
HLA-A-209ENST00000638375 MMP24Q9Y5R2 645 aa15.33■□□□□ 0.04
HLA-A-209ENST00000638375 TRAV3A0A0B4J244 114 aa15.32■□□□□ 0.04
HLA-A-209ENST00000638375 CDS2O95674 445 aa15.32■□□□□ 0.04
HLA-A-209ENST00000638375 UBE2MP61081 183 aaKnown RBP15.32■□□□□ 0.04
HLA-A-209ENST00000638375 ERVK-16P61578 105 aa15.32■□□□□ 0.04
HLA-A-209ENST00000638375 FOXL1Q12952 345 aa15.32■□□□□ 0.04
HLA-A-209ENST00000638375 AWAT1Q58HT5 328 aa15.32■□□□□ 0.04
HLA-A-209ENST00000638375 ARSJQ5FYB0 599 aaPredicted RBP15.32■□□□□ 0.04
HLA-A-209ENST00000638375 MDFIQ99750 246 aa15.32■□□□□ 0.04
HLA-A-209ENST00000638375 OR51J1Q9H342 316 aa15.32■□□□□ 0.04
HLA-A-209ENST00000638375 NUBP2Q9Y5Y2 271 aa15.32■□□□□ 0.04
HLA-A-209ENST00000638375 KCNAB3O43448 404 aa15.31■□□□□ 0.04
HLA-A-209ENST00000638375 SFT2D2O95562 160 aa15.31■□□□□ 0.04
HLA-A-209ENST00000638375 IGKV1-5P01602 117 aa15.31■□□□□ 0.04
HLA-A-209ENST00000638375 VAMP1P23763 118 aa15.31■□□□□ 0.04
HLA-A-209ENST00000638375 ZNF562Q6V9R5 426 aa15.31■□□□□ 0.04
HLA-A-209ENST00000638375 SELENOHQ8IZQ5 122 aaKnown RBP15.31■□□□□ 0.04
HLA-A-209ENST00000638375 DUSP18Q8NEJ0 188 aa15.31■□□□□ 0.04
HLA-A-209ENST00000638375 TMEM56Q96MV1 263 aa15.31■□□□□ 0.04
HLA-A-209ENST00000638375 NOL4LQ96MY1 436 aaPredicted RBP15.31■□□□□ 0.04
HLA-A-209ENST00000638375 LINC00527Q9UJ94 153 aa15.31■□□□□ 0.04
HLA-A-209ENST00000638375 FBXO7Q9Y3I1 522 aa15.31■□□□□ 0.04
HLA-A-209ENST00000638375 RNF114Q9Y508 228 aa15.31■□□□□ 0.04
HLA-A-209ENST00000638375 TMEM56-RWDD3S4R434 201 aa15.31■□□□□ 0.04
HLA-A-209ENST00000638375 A0A1B0GUS0 222 aa15.3■□□□□ 0.04
HLA-A-209ENST00000638375 UPK2O00526 184 aa15.3■□□□□ 0.04
HLA-A-209ENST00000638375 ATP6V0E1O15342 81 aa15.3■□□□□ 0.04
HLA-A-209ENST00000638375 H2AFB2P0C5Z0 115 aa15.3■□□□□ 0.04
HLA-A-209ENST00000638375 OR4E1P0C645 316 aa15.3■□□□□ 0.04
HLA-A-209ENST00000638375 OR9G9P0C7N8 305 aa15.3■□□□□ 0.04
HLA-A-209ENST00000638375 P0C879 139 aa15.3■□□□□ 0.04
HLA-A-209ENST00000638375 COMPP49747 757 aaPredicted RBP15.3■□□□□ 0.04
HLA-A-209ENST00000638375 PROK1P58294 105 aa15.3■□□□□ 0.04
HLA-A-209ENST00000638375 GNB1P62873 340 aa15.3■□□□□ 0.04
HLA-A-209ENST00000638375 DCTN2Q13561 401 aaKnown RBP15.3■□□□□ 0.04
HLA-A-209ENST00000638375 KRTAP21-3Q3LHN1 58 aa15.3■□□□□ 0.04
HLA-A-209ENST00000638375 TMEM268Q5VZI3 342 aa15.3■□□□□ 0.04
HLA-A-209ENST00000638375 MMD2Q8IY49 270 aa15.3■□□□□ 0.04
HLA-A-209ENST00000638375 CADM3Q8N126 398 aa15.3■□□□□ 0.04
HLA-A-209ENST00000638375 OR4A5Q8NH83 315 aa15.3■□□□□ 0.04
HLA-A-209ENST00000638375 RBPMSQ93062 196 aaKnown RBP15.3■□□□□ 0.04
HLA-A-209ENST00000638375 WNT10AQ9GZT5 417 aa15.3■□□□□ 0.04
HLA-A-209ENST00000638375 ALX4Q9H161 411 aaPredicted RBP15.3■□□□□ 0.04
HLA-A-209ENST00000638375 PARP11Q9NR21 331 aa15.3■□□□□ 0.04
HLA-A-209ENST00000638375 PLXNB1O43157 2135 aa15.29■□□□□ 0.04
HLA-A-209ENST00000638375 A0A0G2JRQ6 117 aa15.29■□□□□ 0.04
HLA-A-209ENST00000638375 C9orf170A2RU37 121 aa15.29■□□□□ 0.04
HLA-A-209ENST00000638375 AP4M1O00189 453 aa15.29■□□□□ 0.04
HLA-A-209ENST00000638375 EGR2P11161 476 aaPredicted RBP15.29■□□□□ 0.04
HLA-A-209ENST00000638375 ANXA3P12429 323 aa15.29■□□□□ 0.04
HLA-A-209ENST00000638375 MYOD1P15172 320 aa15.29■□□□□ 0.04
HLA-A-209ENST00000638375 SPNP16150 400 aa15.29■□□□□ 0.04
HLA-A-209ENST00000638375 MECP2P51608 486 aaKnown RBP15.29■□□□□ 0.04
HLA-A-209ENST00000638375 RAB25P57735 213 aa15.29■□□□□ 0.04
HLA-A-209ENST00000638375 DHRS2Q13268 280 aa15.29■□□□□ 0.04
HLA-A-209ENST00000638375 FXYD3Q14802 87 aa15.29■□□□□ 0.04
HLA-A-209ENST00000638375 TNXAQ16473 311 aa15.29■□□□□ 0.04
HLA-A-209ENST00000638375 ANKRD55Q3KP44 614 aa15.29■□□□□ 0.04
HLA-A-209ENST00000638375 C10orf55Q5SWW7 151 aa15.29■□□□□ 0.04
HLA-A-209ENST00000638375 ZNF695Q8IW36 515 aa15.29■□□□□ 0.04
HLA-A-209ENST00000638375 FOXRED2Q8IWF2 684 aa15.29■□□□□ 0.04
HLA-A-209ENST00000638375 CASTOR1Q8WTX7 329 aa15.29■□□□□ 0.04
HLA-A-209ENST00000638375 ARPC1AQ92747 370 aa15.29■□□□□ 0.04
HLA-A-209ENST00000638375 IL22RA2Q969J5 263 aa15.29■□□□□ 0.04
HLA-A-209ENST00000638375 FAM103A1Q9BTL3 118 aaKnown RBP15.29■□□□□ 0.04
HLA-A-209ENST00000638375 CREBL2O60519 120 aaPredicted RBP15.28■□□□□ 0.04
HLA-A-209ENST00000638375 HLA-AP01891 365 aaKnown RBP15.28■□□□□ 0.04
HLA-A-209ENST00000638375 IGF1P05019 195 aa15.28■□□□□ 0.04
HLA-A-209ENST00000638375 AKR1C2P52895 323 aa15.28■□□□□ 0.04
HLA-A-209ENST00000638375 RPL8P62917 257 aaKnown RBP15.28■□□□□ 0.04
HLA-A-209ENST00000638375 IZUMO4Q1ZYL8 232 aa15.28■□□□□ 0.04
HLA-A-209ENST00000638375 C4orf46Q504U0 113 aa15.28■□□□□ 0.04
HLA-A-209ENST00000638375 H2BFWTQ7Z2G1 175 aa15.28■□□□□ 0.04
HLA-A-209ENST00000638375 LYG2Q86SG7 212 aa15.28■□□□□ 0.04
HLA-A-209ENST00000638375 STPG2Q8N412 459 aa15.28■□□□□ 0.04
HLA-A-209ENST00000638375 KLHDC1Q8N7A1 406 aa15.28■□□□□ 0.04
HLA-A-209ENST00000638375 WIPF2Q8TF74 440 aaPredicted RBP15.28■□□□□ 0.04
HLA-A-209ENST00000638375 ZNF580Q9UK33 172 aa15.28■□□□□ 0.04
HLA-A-209ENST00000638375 NSG2Q9Y328 171 aa15.28■□□□□ 0.04
HLA-A-209ENST00000638375 TNCP24821 2201 aa15.27■□□□□ 0.04
HLA-A-209ENST00000638375 HAX1O00165 279 aa15.27■□□□□ 0.04
HLA-A-209ENST00000638375 ATG12O94817 140 aa15.27■□□□□ 0.04
HLA-A-209ENST00000638375 CNIH1O95406 144 aa15.27■□□□□ 0.04
HLA-A-209ENST00000638375 HLA-GP17693 338 aa15.27■□□□□ 0.04
HLA-A-209ENST00000638375 CRIP2P52943 208 aaPredicted RBP15.27■□□□□ 0.04
HLA-A-209ENST00000638375 SRPXP78539 464 aa15.27■□□□□ 0.04
HLA-A-209ENST00000638375 C10orf99Q6UWK7 81 aa15.27■□□□□ 0.04
HLA-A-209ENST00000638375 LGI3Q8N145 548 aa15.27■□□□□ 0.04
HLA-A-209ENST00000638375 SLC35G3Q8N808 338 aa15.27■□□□□ 0.04
HLA-A-209ENST00000638375 OR52B4Q8NGK2 314 aa15.27■□□□□ 0.04
HLA-A-209ENST00000638375 GRPEL2Q8TAA5 225 aa15.27■□□□□ 0.04
HLA-A-209ENST00000638375 ABHD5Q8WTS1 349 aa15.27■□□□□ 0.04
HLA-A-209ENST00000638375 SRSF12Q8WXF0 261 aaKnown RBP15.27■□□□□ 0.04
HLA-A-209ENST00000638375 DBX1A6NMT0 343 aa15.26■□□□□ 0.03
HLA-A-209ENST00000638375 E7EUB6 86 aa15.26■□□□□ 0.03
HLA-A-209ENST00000638375 G3V318 75 aa15.26■□□□□ 0.03
HLA-A-209ENST00000638375 MAS1LP35410 378 aa15.26■□□□□ 0.03
HLA-A-209ENST00000638375 OR2B8PP59922 312 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms