RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 TCF19Q9Y242 345 aa17.65■□□□□ 0.42
CLN6-224ENST00000638076 C15orf61A6NNL5 157 aa17.65■□□□□ 0.42
CLN6-224ENST00000638076 GFRA3O60609 400 aa17.65■□□□□ 0.42
CLN6-224ENST00000638076 FCN3O75636 299 aa17.65■□□□□ 0.42
CLN6-224ENST00000638076 NCMAPQ5T1S8 102 aa17.65■□□□□ 0.42
CLN6-224ENST00000638076 YLPM1P49750 1951 aaKnown RBP17.64■□□□□ 0.42
CLN6-224ENST00000638076 C17orf112F2Z3M2 114 aa17.64■□□□□ 0.41
CLN6-224ENST00000638076 TAGLN2P37802 199 aaKnown RBP17.64■□□□□ 0.41
CLN6-224ENST00000638076 HOXA1P49639 335 aaPredicted RBP17.64■□□□□ 0.41
CLN6-224ENST00000638076 DLK1P80370 383 aa17.64■□□□□ 0.41
CLN6-224ENST00000638076 FAM90A2PQ658T7 463 aa17.64■□□□□ 0.41
CLN6-224ENST00000638076 ABHD12Q8N2K0 398 aa17.64■□□□□ 0.41
CLN6-224ENST00000638076 FAM24BQ8N5W8 94 aa17.64■□□□□ 0.41
CLN6-224ENST00000638076 C2CD4CQ8TF44 421 aa17.64■□□□□ 0.41
CLN6-224ENST00000638076 TVP23CQ96ET8 276 aa17.64■□□□□ 0.41
CLN6-224ENST00000638076 GAL3ST2Q9H3Q3 398 aa17.64■□□□□ 0.41
CLN6-224ENST00000638076 CTXND1A0A1B0GTU2 59 aa17.64■□□□□ 0.41
CLN6-224ENST00000638076 MEF2CQ06413 473 aaPredicted RBP17.64■□□□□ 0.41
CLN6-224ENST00000638076 CA5BP1Q8WTZ4 195 aa17.64■□□□□ 0.41
CLN6-224ENST00000638076 DYNLRB1Q9NP97 96 aa17.64■□□□□ 0.41
CLN6-224ENST00000638076 VAX2Q9UIW0 290 aa17.64■□□□□ 0.41
CLN6-224ENST00000638076 WDR83OSQ9Y284 106 aa17.64■□□□□ 0.41
CLN6-224ENST00000638076 IFNA1P01562 189 aa17.63■□□□□ 0.41
CLN6-224ENST00000638076 CT45A6P0DMU7 189 aa17.63■□□□□ 0.41
CLN6-224ENST00000638076 CT45A5P0DMU8 189 aa17.63■□□□□ 0.41
CLN6-224ENST00000638076 CT45A7P0DMV0 189 aa17.63■□□□□ 0.41
CLN6-224ENST00000638076 CCL3L1P16619 93 aa17.63■□□□□ 0.41
CLN6-224ENST00000638076 SMCO3A2RU48 225 aa17.63■□□□□ 0.41
CLN6-224ENST00000638076 OR2C1O95371 312 aa17.63■□□□□ 0.41
CLN6-224ENST00000638076 ZNF714Q96N38 554 aa17.63■□□□□ 0.41
CLN6-224ENST00000638076 P2RX4Q99571 388 aa17.63■□□□□ 0.41
CLN6-224ENST00000638076 TMEM14BQ9NUH8 114 aa17.63■□□□□ 0.41
CLN6-224ENST00000638076 FOXA2Q9Y261 457 aaPredicted RBP17.63■□□□□ 0.41
CLN6-224ENST00000638076 TET2Q6N021 2002 aaPredicted RBP17.62■□□□□ 0.41
CLN6-224ENST00000638076 HRASP01112 189 aa17.62■□□□□ 0.41
CLN6-224ENST00000638076 RNF212Q495C1 297 aa17.62■□□□□ 0.41
CLN6-224ENST00000638076 LYPD2Q6UXB3 125 aa17.62■□□□□ 0.41
CLN6-224ENST00000638076 SLC35E3Q7Z769 313 aa17.62■□□□□ 0.41
CLN6-224ENST00000638076 Q8N7P7 452 aa17.62■□□□□ 0.41
CLN6-224ENST00000638076 ACTR3CQ9C0K3 210 aaPredicted RBP17.62■□□□□ 0.41
CLN6-224ENST00000638076 TMPRSS5Q9H3S3 457 aa17.62■□□□□ 0.41
CLN6-224ENST00000638076 RAXQ9Y2V3 346 aa17.62■□□□□ 0.41
CLN6-224ENST00000638076 PMS2P11Q13670 270 aa17.61■□□□□ 0.41
CLN6-224ENST00000638076 TMEM200BQ69YZ2 307 aa17.61■□□□□ 0.41
CLN6-224ENST00000638076 RBMS3Q6XE24 437 aaKnown RBP17.61■□□□□ 0.41
CLN6-224ENST00000638076 OR10A7Q8NGE5 316 aa17.61■□□□□ 0.41
CLN6-224ENST00000638076 TMEM170AQ8WVE7 144 aa17.61■□□□□ 0.41
CLN6-224ENST00000638076 H1FXQ92522 213 aaKnown RBP17.61■□□□□ 0.41
CLN6-224ENST00000638076 hCG_1809904A0A1W2PP81 198 aa17.61■□□□□ 0.41
CLN6-224ENST00000638076 A0A1W2PR64 198 aa17.61■□□□□ 0.41
CLN6-224ENST00000638076 A0A1W2PRV1 198 aa17.61■□□□□ 0.41
CLN6-224ENST00000638076 ZNF727A8MUV8 499 aa17.61■□□□□ 0.41
CLN6-224ENST00000638076 PRSS46E5RG02 174 aa17.61■□□□□ 0.41
CLN6-224ENST00000638076 IGKV1-16P04430 117 aa17.61■□□□□ 0.41
CLN6-224ENST00000638076 HSPE1P61604 102 aaKnown RBP17.61■□□□□ 0.41
CLN6-224ENST00000638076 HABP2Q14520 560 aaPredicted RBP17.61■□□□□ 0.41
CLN6-224ENST00000638076 HEPN1Q6WQI6 88 aa17.61■□□□□ 0.41
CLN6-224ENST00000638076 RAB24Q969Q5 203 aa17.61■□□□□ 0.41
CLN6-224ENST00000638076 MS4A5Q9H3V2 200 aa17.61■□□□□ 0.41
CLN6-224ENST00000638076 SLC35D1Q9NTN3 355 aa17.61■□□□□ 0.41
CLN6-224ENST00000638076 TNFRSF13BO14836 293 aaPredicted RBP17.6■□□□□ 0.41
CLN6-224ENST00000638076 DEFA4P12838 97 aa17.6■□□□□ 0.41
CLN6-224ENST00000638076 RAB5BP61020 215 aa17.6■□□□□ 0.41
CLN6-224ENST00000638076 NHLH1Q02575 133 aa17.6■□□□□ 0.41
CLN6-224ENST00000638076 POU2AF1Q16633 256 aa17.6■□□□□ 0.41
CLN6-224ENST00000638076 OR13D1Q8NGV5 346 aa17.6■□□□□ 0.41
CLN6-224ENST00000638076 TLN1Q9Y490 2541 aaKnown RBP17.6■□□□□ 0.41
CLN6-224ENST00000638076 NDUFB3O43676 98 aa17.6■□□□□ 0.41
CLN6-224ENST00000638076 IFNA4P05014 189 aa17.6■□□□□ 0.41
CLN6-224ENST00000638076 RAB5AP20339 215 aa17.6■□□□□ 0.41
CLN6-224ENST00000638076 CASP6P55212 293 aa17.6■□□□□ 0.41
CLN6-224ENST00000638076 TREML4Q6UXN2 200 aa17.6■□□□□ 0.41
CLN6-224ENST00000638076 GGACTQ9BVM4 153 aa17.6■□□□□ 0.41
CLN6-224ENST00000638076 A0A087WWC5 75 aa17.59■□□□□ 0.41
CLN6-224ENST00000638076 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.59■□□□□ 0.41
CLN6-224ENST00000638076 C1orf196B1AJZ1 125 aa17.59■□□□□ 0.41
CLN6-224ENST00000638076 MYOD1P15172 320 aa17.59■□□□□ 0.41
CLN6-224ENST00000638076 APOBEC3AP31941 199 aaPredicted RBP17.59■□□□□ 0.41
CLN6-224ENST00000638076 RTL8BQ17RB0 113 aa17.59■□□□□ 0.41
CLN6-224ENST00000638076 ACOT6Q3I5F7 207 aaPredicted RBP17.59■□□□□ 0.41
CLN6-224ENST00000638076 LRRC10Q5BKY1 277 aa17.59■□□□□ 0.41
CLN6-224ENST00000638076 BIN3Q9NQY0 253 aa17.59■□□□□ 0.41
CLN6-224ENST00000638076 CYB5BO43169 146 aa17.59■□□□□ 0.41
CLN6-224ENST00000638076 CD3EP07766 207 aa17.59■□□□□ 0.41
CLN6-224ENST00000638076 UCNP55089 124 aa17.59■□□□□ 0.41
CLN6-224ENST00000638076 LINC01560Q8TB33 94 aa17.59■□□□□ 0.41
CLN6-224ENST00000638076 CTSZQ9UBR2 303 aa17.59■□□□□ 0.41
CLN6-224ENST00000638076 PKDREJQ9NTG1 2253 aa17.58■□□□□ 0.41
CLN6-224ENST00000638076 CD81P60033 236 aa17.58■□□□□ 0.41
CLN6-224ENST00000638076 MEF2BQ02080 365 aaPredicted RBP17.58■□□□□ 0.41
CLN6-224ENST00000638076 ZNF833PQ6ZTB9 187 aa17.58■□□□□ 0.41
CLN6-224ENST00000638076 YPEL4Q96NS1 127 aa17.58■□□□□ 0.41
CLN6-224ENST00000638076 ENY2Q9NPA8 101 aa17.58■□□□□ 0.41
CLN6-224ENST00000638076 OR51B2Q9Y5P1 312 aa17.58■□□□□ 0.41
CLN6-224ENST00000638076 FAM90A27PA6NNH2 459 aa17.58■□□□□ 0.4
CLN6-224ENST00000638076 SRRM4A7MD48 611 aaKnown RBP17.58■□□□□ 0.4
CLN6-224ENST00000638076 MPDU1O75352 247 aa17.58■□□□□ 0.4
CLN6-224ENST00000638076 SLC24A4Q8NFF2 622 aa17.58■□□□□ 0.4
CLN6-224ENST00000638076 HINT2Q9BX68 163 aa17.58■□□□□ 0.4
CLN6-224ENST00000638076 DVL1O14640 695 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms