RNA–Protein interactions for RNA: ENST00000636816.1

CACNA1A-231, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 5

Gene CACNA1A, Length 1,978 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-231	ENST00000636816	HLA-DRB5	Q30154	266 aa		12.86	□□□□□ -0.35
CACNA1A-231	ENST00000636816	ZNF429	Q86V71	674 aa		12.86	□□□□□ -0.35
CACNA1A-231	ENST00000636816	TGIF2LX	Q8IUE1	241 aa		12.86	□□□□□ -0.35
CACNA1A-231	ENST00000636816	LHX4	Q969G2	390 aa		12.86	□□□□□ -0.35
CACNA1A-231	ENST00000636816	CIB3	Q96Q77	187 aa	Predicted RBP	12.86	□□□□□ -0.35
CACNA1A-231	ENST00000636816	TSNAX	Q99598	290 aa	Known RBP	12.86	□□□□□ -0.35
CACNA1A-231	ENST00000636816	CLEC7A	Q9BXN2	247 aa		12.86	□□□□□ -0.35
CACNA1A-231	ENST00000636816	PARP11	Q9NR21	331 aa		12.86	□□□□□ -0.35
CACNA1A-231	ENST00000636816	MMP26	Q9NRE1	261 aa		12.86	□□□□□ -0.35
CACNA1A-231	ENST00000636816	FOXA2	Q9Y261	457 aa	Predicted RBP	12.86	□□□□□ -0.35
CACNA1A-231	ENST00000636816	ZFP36	P26651	326 aa	Known RBP	12.85	□□□□□ -0.35
CACNA1A-231	ENST00000636816	CAMLG	P49069	296 aa		12.85	□□□□□ -0.35
CACNA1A-231	ENST00000636816	PRRX1	P54821	245 aa		12.85	□□□□□ -0.35
CACNA1A-231	ENST00000636816	HNF4G	Q14541	408 aa		12.85	□□□□□ -0.35
CACNA1A-231	ENST00000636816	PDLIM3	Q53GG5	364 aa	Predicted RBP	12.85	□□□□□ -0.35
CACNA1A-231	ENST00000636816	SLC25A24	Q6NUK1	477 aa		12.85	□□□□□ -0.35
CACNA1A-231	ENST00000636816	FAM71F2	Q6NXP2	309 aa		12.85	□□□□□ -0.35
CACNA1A-231	ENST00000636816	PNKD	Q8N490	385 aa		12.85	□□□□□ -0.35
CACNA1A-231	ENST00000636816	BPIFC	Q8NFQ6	507 aa		12.85	□□□□□ -0.35
CACNA1A-231	ENST00000636816	HARBI1	Q96MB7	349 aa		12.85	□□□□□ -0.35
CACNA1A-231	ENST00000636816	HEYL	Q9NQ87	328 aa	Predicted RBP	12.85	□□□□□ -0.35
CACNA1A-231	ENST00000636816	SIRT7	Q9NRC8	400 aa		12.85	□□□□□ -0.35
CACNA1A-231	ENST00000636816	FBXO7	Q9Y3I1	522 aa		12.85	□□□□□ -0.35
CACNA1A-231	ENST00000636816	BUB1B-PAK6	H3BSN5	160 aa		12.85	□□□□□ -0.35
CACNA1A-231	ENST00000636816	RRH	O14718	337 aa		12.85	□□□□□ -0.35
CACNA1A-231	ENST00000636816	ARG1	P05089	322 aa		12.85	□□□□□ -0.35
CACNA1A-231	ENST00000636816	HSPE1	P61604	102 aa	Known RBP	12.85	□□□□□ -0.35
CACNA1A-231	ENST00000636816	SRSF1	Q07955	248 aa	Known RBP eCLIP	12.85	□□□□□ -0.35
CACNA1A-231	ENST00000636816	ZNF616	Q08AN1	781 aa		12.85	□□□□□ -0.35
CACNA1A-231	ENST00000636816	TUSC1	Q2TAM9	212 aa		12.85	□□□□□ -0.35
CACNA1A-231	ENST00000636816	TMEM177	Q53S58	311 aa		12.85	□□□□□ -0.35
CACNA1A-231	ENST00000636816	LDLRAD2	Q5SZI1	272 aa		12.85	□□□□□ -0.35
CACNA1A-231	ENST00000636816	FAM213B	Q8TBF2	198 aa		12.85	□□□□□ -0.35
CACNA1A-231	ENST00000636816	FLYWCH2	Q96CP2	140 aa	Known RBP	12.85	□□□□□ -0.35
CACNA1A-231	ENST00000636816	TMEM231	Q9H6L2	316 aa		12.85	□□□□□ -0.35
CACNA1A-231	ENST00000636816	OR51B2	Q9Y5P1	312 aa		12.85	□□□□□ -0.35
CACNA1A-231	ENST00000636816	UBE2L5P	A0A1B0GUS4	154 aa		12.84	□□□□□ -0.35
CACNA1A-231	ENST00000636816	RBP4	P02753	201 aa		12.84	□□□□□ -0.35
CACNA1A-231	ENST00000636816	PJVK	Q0ZLH3	352 aa		12.84	□□□□□ -0.35
CACNA1A-231	ENST00000636816	LRRC75B	Q2VPJ9	315 aa		12.84	□□□□□ -0.35
CACNA1A-231	ENST00000636816	PUSL1	Q8N0Z8	303 aa	Known RBP	12.84	□□□□□ -0.35
CACNA1A-231	ENST00000636816	OR4P4	Q8NGL7	312 aa		12.84	□□□□□ -0.35
CACNA1A-231	ENST00000636816	LYPD6B	Q8NI32	183 aa		12.84	□□□□□ -0.35
CACNA1A-231	ENST00000636816	OSR1	Q8TAX0	266 aa	Predicted RBP	12.84	□□□□□ -0.35
CACNA1A-231	ENST00000636816	SCGB1C1	Q8TD33	95 aa		12.84	□□□□□ -0.35
CACNA1A-231	ENST00000636816	TMEM170A	Q8WVE7	144 aa		12.84	□□□□□ -0.35
CACNA1A-231	ENST00000636816	GNPNAT1	Q96EK6	184 aa	Predicted RBP	12.84	□□□□□ -0.35
CACNA1A-231	ENST00000636816	HINT2	Q9BX68	163 aa		12.84	□□□□□ -0.35
CACNA1A-231	ENST00000636816	ASH1L	Q9NR48	2969 aa	Known RBP	12.84	□□□□□ -0.35
CACNA1A-231	ENST00000636816		A0A1B0GV50	99 aa		12.83	□□□□□ -0.35
CACNA1A-231	ENST00000636816	RAB19	A4D1S5	217 aa		12.83	□□□□□ -0.35
CACNA1A-231	ENST00000636816	ENSA	O43768	121 aa	Known RBP	12.83	□□□□□ -0.35
CACNA1A-231	ENST00000636816	IFNA10	P01566	189 aa		12.83	□□□□□ -0.35
CACNA1A-231	ENST00000636816	IGHV4-39	P01824	125 aa		12.83	□□□□□ -0.35
CACNA1A-231	ENST00000636816	HOXA1	P49639	335 aa	Predicted RBP	12.83	□□□□□ -0.35
CACNA1A-231	ENST00000636816	OR10P1	Q8NGE3	313 aa		12.83	□□□□□ -0.35
CACNA1A-231	ENST00000636816	IGFBPL1	Q8WX77	278 aa		12.83	□□□□□ -0.35
CACNA1A-231	ENST00000636816	TNFRSF14	Q92956	283 aa		12.83	□□□□□ -0.35
CACNA1A-231	ENST00000636816	WDR61	Q9GZS3	305 aa	Known RBP	12.83	□□□□□ -0.35
CACNA1A-231	ENST00000636816	HIPK2	Q9H2X6	1198 aa		12.83	□□□□□ -0.35
CACNA1A-231	ENST00000636816	WASHC3	Q9Y3C0	194 aa		12.83	□□□□□ -0.35
CACNA1A-231	ENST00000636816	FAM96B	Q9Y3D0	163 aa		12.83	□□□□□ -0.35
CACNA1A-231	ENST00000636816	TEX50	A0A1B0GTY4	177 aa		12.83	□□□□□ -0.36
CACNA1A-231	ENST00000636816	SCO1	O75880	301 aa		12.83	□□□□□ -0.36
CACNA1A-231	ENST00000636816	KBTBD11	O94819	623 aa		12.83	□□□□□ -0.36
CACNA1A-231	ENST00000636816	IGLV2-23	P01705	113 aa		12.83	□□□□□ -0.36
CACNA1A-231	ENST00000636816	ZP3	P21754	424 aa		12.83	□□□□□ -0.36
CACNA1A-231	ENST00000636816	IL3RA	P26951	378 aa		12.83	□□□□□ -0.36
CACNA1A-231	ENST00000636816	TLE4	Q04727	773 aa		12.83	□□□□□ -0.36
CACNA1A-231	ENST00000636816	KLRD1	Q13241	179 aa		12.83	□□□□□ -0.36
CACNA1A-231	ENST00000636816	PDPN	Q86YL7	162 aa		12.83	□□□□□ -0.36
CACNA1A-231	ENST00000636816	BEND2	Q8NDZ0	799 aa		12.83	□□□□□ -0.36
CACNA1A-231	ENST00000636816	BPESC1	Q9GZL8	116 aa		12.83	□□□□□ -0.36
CACNA1A-231	ENST00000636816	BET1L	Q9NYM9	111 aa		12.83	□□□□□ -0.36
CACNA1A-231	ENST00000636816	WNK2	Q9Y3S1	2297 aa		12.82	□□□□□ -0.36
CACNA1A-231	ENST00000636816	hCG_1809904	A0A1W2PP81	198 aa		12.82	□□□□□ -0.36
CACNA1A-231	ENST00000636816		A0A1W2PPE2	198 aa		12.82	□□□□□ -0.36
CACNA1A-231	ENST00000636816		A0A1W2PR64	198 aa		12.82	□□□□□ -0.36
CACNA1A-231	ENST00000636816		A0A1W2PRV1	198 aa		12.82	□□□□□ -0.36
CACNA1A-231	ENST00000636816	PLXNB1	O43157	2135 aa		12.82	□□□□□ -0.36
CACNA1A-231	ENST00000636816	IGHV2-5	P01817	119 aa		12.82	□□□□□ -0.36
CACNA1A-231	ENST00000636816	RAB5C	P51148	216 aa		12.82	□□□□□ -0.36
CACNA1A-231	ENST00000636816	F2RL1	P55085	397 aa		12.82	□□□□□ -0.36
CACNA1A-231	ENST00000636816	OR4C13	Q8NGP0	309 aa		12.82	□□□□□ -0.36
CACNA1A-231	ENST00000636816	PCGF1	Q9BSM1	259 aa		12.82	□□□□□ -0.36
CACNA1A-231	ENST00000636816	MS4A7	Q9GZW8	240 aa	Predicted RBP	12.82	□□□□□ -0.36
CACNA1A-231	ENST00000636816	VSIR	Q9H7M9	311 aa		12.82	□□□□□ -0.36
CACNA1A-231	ENST00000636816	KRBOX1	C9JBD0	128 aa		12.81	□□□□□ -0.36
CACNA1A-231	ENST00000636816	PAX6	P26367	422 aa		12.81	□□□□□ -0.36
CACNA1A-231	ENST00000636816	LCN2	P80188	198 aa		12.81	□□□□□ -0.36
CACNA1A-231	ENST00000636816	HCP5	Q6MZN7	132 aa		12.81	□□□□□ -0.36
CACNA1A-231	ENST00000636816	IL34	Q6ZMJ4	242 aa		12.81	□□□□□ -0.36
CACNA1A-231	ENST00000636816	TAF15	Q92804	592 aa	Known RBP eCLIP	12.81	□□□□□ -0.36
CACNA1A-231	ENST00000636816	NARS2	Q96I59	477 aa	Known RBP	12.81	□□□□□ -0.36
CACNA1A-231	ENST00000636816	CLCC1	Q96S66	551 aa		12.81	□□□□□ -0.36
CACNA1A-231	ENST00000636816	PRND	Q9UKY0	176 aa		12.81	□□□□□ -0.36
CACNA1A-231	ENST00000636816	IGHV1-3	A0A0C4DH29	117 aa		12.81	□□□□□ -0.36
CACNA1A-231	ENST00000636816		A0A1W2PRD5	423 aa		12.81	□□□□□ -0.36
CACNA1A-231	ENST00000636816		A0A1W2PRF3	423 aa		12.81	□□□□□ -0.36
CACNA1A-231	ENST00000636816		A0A1W2PRM7	423 aa		12.81	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms