RNA–Protein interactions for RNA: ENST00000629667.2

PDLIM3-213, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 1,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-213ENST00000629667 ZNF645Q8N7E2 425 aa11.63□□□□□ -0.55
PDLIM3-213ENST00000629667 VSTM2AQ8TAG5 236 aa11.63□□□□□ -0.55
PDLIM3-213ENST00000629667 FBLIM1Q8WUP2 373 aa11.63□□□□□ -0.55
PDLIM3-213ENST00000629667 FANCD2OSQ96PS1 177 aa11.63□□□□□ -0.55
PDLIM3-213ENST00000629667 OR2A7Q96R45 310 aa11.63□□□□□ -0.55
PDLIM3-213ENST00000629667 SLC2A9Q9NRM0 540 aa11.63□□□□□ -0.55
PDLIM3-213ENST00000629667 ERICH4A6NGS2 130 aa11.62□□□□□ -0.55
PDLIM3-213ENST00000629667 E7EUB6 86 aa11.62□□□□□ -0.55
PDLIM3-213ENST00000629667 PTGES3LE9PB15 166 aa11.62□□□□□ -0.55
PDLIM3-213ENST00000629667 KBTBD11O94819 623 aa11.62□□□□□ -0.55
PDLIM3-213ENST00000629667 IL6RP08887 468 aaPredicted RBP11.62□□□□□ -0.55
PDLIM3-213ENST00000629667 DEFA4P12838 97 aa11.62□□□□□ -0.55
PDLIM3-213ENST00000629667 HIST1H1BP16401 226 aaKnown RBP11.62□□□□□ -0.55
PDLIM3-213ENST00000629667 TALDO1P37837 337 aa11.62□□□□□ -0.55
PDLIM3-213ENST00000629667 PLA2G7Q13093 441 aa11.62□□□□□ -0.55
PDLIM3-213ENST00000629667 ARFRP1Q13795 201 aa11.62□□□□□ -0.55
PDLIM3-213ENST00000629667 UNQ9165/PRO28630Q6UXU0 137 aa11.62□□□□□ -0.55
PDLIM3-213ENST00000629667 TMEM91Q6ZNR0 172 aa11.62□□□□□ -0.55
PDLIM3-213ENST00000629667 STPG3Q8N7X2 389 aa11.62□□□□□ -0.55
PDLIM3-213ENST00000629667 PHLDA1Q8WV24 401 aaPredicted RBP11.62□□□□□ -0.55
PDLIM3-213ENST00000629667 MRPL27Q9P0M9 148 aaKnown RBP11.62□□□□□ -0.55
PDLIM3-213ENST00000629667 UBQLN2Q9UHD9 624 aa11.62□□□□□ -0.55
PDLIM3-213ENST00000629667 LSM2Q9Y333 95 aaKnown RBP11.62□□□□□ -0.55
PDLIM3-213ENST00000629667 V9GY05 133 aa11.62□□□□□ -0.55
PDLIM3-213ENST00000629667 TRBV7-1A0A0A6YYK4 115 aa11.61□□□□□ -0.55
PDLIM3-213ENST00000629667 MFNGO00587 321 aa11.61□□□□□ -0.55
PDLIM3-213ENST00000629667 CLEC3BP05452 202 aa11.61□□□□□ -0.55
PDLIM3-213ENST00000629667 CRYGCP07315 174 aa11.61□□□□□ -0.55
PDLIM3-213ENST00000629667 ZNF735P0CB33 412 aa11.61□□□□□ -0.55
PDLIM3-213ENST00000629667 C8orf88P0DMB2 117 aa11.61□□□□□ -0.55
PDLIM3-213ENST00000629667 AREGP15514 252 aa11.61□□□□□ -0.55
PDLIM3-213ENST00000629667 CD36P16671 472 aa11.61□□□□□ -0.55
PDLIM3-213ENST00000629667 CALRP27797 417 aaKnown RBP11.61□□□□□ -0.55
PDLIM3-213ENST00000629667 PSMB6P28072 239 aa11.61□□□□□ -0.55
PDLIM3-213ENST00000629667 MAS1LP35410 378 aa11.61□□□□□ -0.55
PDLIM3-213ENST00000629667 PSMD7P51665 324 aa11.61□□□□□ -0.55
PDLIM3-213ENST00000629667 TRAM1Q15629 374 aa11.61□□□□□ -0.55
PDLIM3-213ENST00000629667 HES5Q5TA89 166 aa11.61□□□□□ -0.55
PDLIM3-213ENST00000629667 OR10R2Q8NGX6 335 aa11.61□□□□□ -0.55
PDLIM3-213ENST00000629667 RNF183Q96D59 192 aa11.61□□□□□ -0.55
PDLIM3-213ENST00000629667 CXorf58Q96LI9 332 aa11.61□□□□□ -0.55
PDLIM3-213ENST00000629667 SPAG8Q99932 426 aaPredicted RBP11.61□□□□□ -0.55
PDLIM3-213ENST00000629667 PCLOQ9Y6V0 5065 aa11.61□□□□□ -0.55
PDLIM3-213ENST00000629667 KIR2DL5BA0A0G2JN68 375 aa11.6□□□□□ -0.55
PDLIM3-213ENST00000629667 KIR2DL5BA0A0G2JPC4 375 aa11.6□□□□□ -0.55
PDLIM3-213ENST00000629667 HSMCR30P0CW71 290 aa11.6□□□□□ -0.55
PDLIM3-213ENST00000629667 HIST1H1DP16402 221 aaKnown RBP11.6□□□□□ -0.55
PDLIM3-213ENST00000629667 CTRB1P17538 263 aa11.6□□□□□ -0.55
PDLIM3-213ENST00000629667 GALP22466 123 aa11.6□□□□□ -0.55
PDLIM3-213ENST00000629667 CRHBPP24387 322 aa11.6□□□□□ -0.55
PDLIM3-213ENST00000629667 RPS25P62851 125 aaKnown RBP11.6□□□□□ -0.55
PDLIM3-213ENST00000629667 RPL30P62888 115 aaKnown RBP11.6□□□□□ -0.55
PDLIM3-213ENST00000629667 CTRB2Q6GPI1 263 aa11.6□□□□□ -0.55
PDLIM3-213ENST00000629667 Q6ZS49 121 aa11.6□□□□□ -0.55
PDLIM3-213ENST00000629667 KIR2DL5AQ8N109 375 aa11.6□□□□□ -0.55
PDLIM3-213ENST00000629667 OR4S2Q8NH73 311 aa11.6□□□□□ -0.55
PDLIM3-213ENST00000629667 KIR2DL5BQ8NHK3 375 aa11.6□□□□□ -0.55
PDLIM3-213ENST00000629667 TMEM167AQ8TBQ9 72 aa11.6□□□□□ -0.55
PDLIM3-213ENST00000629667 C5orf66Q9H5L9 145 aa11.6□□□□□ -0.55
PDLIM3-213ENST00000629667 RBMX2Q9Y388 322 aaKnown RBP11.6□□□□□ -0.55
PDLIM3-213ENST00000629667 UFC1Q9Y3C8 167 aa11.6□□□□□ -0.55
PDLIM3-213ENST00000629667 IGKV1D-8A0A087WSZ0 117 aa11.59□□□□□ -0.55
PDLIM3-213ENST00000629667 A0A1B0GW64 132 aa11.59□□□□□ -0.55
PDLIM3-213ENST00000629667 MFSD2BA6NFX1 497 aa11.59□□□□□ -0.55
PDLIM3-213ENST00000629667 SLC22A5O76082 557 aa11.59□□□□□ -0.55
PDLIM3-213ENST00000629667 REG1AP05451 166 aa11.59□□□□□ -0.55
PDLIM3-213ENST00000629667 MYOD1P15172 320 aa11.59□□□□□ -0.55
PDLIM3-213ENST00000629667 PSMA1P25786 263 aaKnown RBP11.59□□□□□ -0.55
PDLIM3-213ENST00000629667 GPR183P32249 361 aa11.59□□□□□ -0.55
PDLIM3-213ENST00000629667 ELLP55199 621 aaPredicted RBP11.59□□□□□ -0.55
PDLIM3-213ENST00000629667 PLET1Q6UQ28 207 aa11.59□□□□□ -0.55
PDLIM3-213ENST00000629667 PUSL1Q8N0Z8 303 aaKnown RBP11.59□□□□□ -0.55
PDLIM3-213ENST00000629667 TCTEX1D2Q8WW35 142 aa11.59□□□□□ -0.55
PDLIM3-213ENST00000629667 OR2W1Q9Y3N9 320 aa11.59□□□□□ -0.55
PDLIM3-213ENST00000629667 IGLV11-55A0A075B6I3 123 aa11.58□□□□□ -0.56
PDLIM3-213ENST00000629667 IGHV3-35A0A0C4DH35 117 aa11.58□□□□□ -0.56
PDLIM3-213ENST00000629667 RAB27BO00194 218 aa11.58□□□□□ -0.56
PDLIM3-213ENST00000629667 RPL35AP18077 110 aaKnown RBP11.58□□□□□ -0.56
PDLIM3-213ENST00000629667 NFYAP23511 347 aaPredicted RBP11.58□□□□□ -0.56
PDLIM3-213ENST00000629667 SSX1Q16384 188 aa11.58□□□□□ -0.56
PDLIM3-213ENST00000629667 KLK9Q2XQG4 91 aa11.58□□□□□ -0.56
PDLIM3-213ENST00000629667 SSX9Q7RTT3 188 aa11.58□□□□□ -0.56
PDLIM3-213ENST00000629667 HSD17B10Q99714 261 aaKnown RBP11.58□□□□□ -0.56
PDLIM3-213ENST00000629667 SCN3BQ9NY72 215 aa11.58□□□□□ -0.56
PDLIM3-213ENST00000629667 KLK9Q9UKQ9 250 aa11.58□□□□□ -0.56
PDLIM3-213ENST00000629667 SPATA2Q9UM82 520 aa11.58□□□□□ -0.56
PDLIM3-213ENST00000629667 HECTD4Q9Y4D8 3996 aa11.57□□□□□ -0.56
PDLIM3-213ENST00000629667 METTL21EPA6NDL7 271 aa11.57□□□□□ -0.56
PDLIM3-213ENST00000629667 TSPAN4O14817 238 aa11.57□□□□□ -0.56
PDLIM3-213ENST00000629667 HRASP01112 189 aa11.57□□□□□ -0.56
PDLIM3-213ENST00000629667 HLA-DQB1P01920 261 aa11.57□□□□□ -0.56
PDLIM3-213ENST00000629667 CTXN2P0C2S0 81 aa11.57□□□□□ -0.56
PDLIM3-213ENST00000629667 RPL8P62917 257 aaKnown RBP11.57□□□□□ -0.56
PDLIM3-213ENST00000629667 LAMTOR1Q6IAA8 161 aa11.57□□□□□ -0.56
PDLIM3-213ENST00000629667 VPS13DQ5THJ4 4388 aa11.56□□□□□ -0.56
PDLIM3-213ENST00000629667 IGLV2-14P01704 120 aa11.56□□□□□ -0.56
PDLIM3-213ENST00000629667 HLA-GP17693 338 aa11.56□□□□□ -0.56
PDLIM3-213ENST00000629667 RAB6AP20340 208 aa11.56□□□□□ -0.56
PDLIM3-213ENST00000629667 DTYMKP23919 212 aa11.56□□□□□ -0.56
PDLIM3-213ENST00000629667 FABP5Q01469 135 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms