RNA–Protein interactions for RNA: ENST00000628343.2

SOX2-OT-246, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 746 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-246ENST00000628343 CD300LFQ8TDQ1 290 aa10.58□□□□□ -0.72
SOX2-OT-246ENST00000628343 SRSF12Q8WXF0 261 aaKnown RBP10.58□□□□□ -0.72
SOX2-OT-246ENST00000628343 TRIM63Q969Q1 353 aa10.58□□□□□ -0.72
SOX2-OT-246ENST00000628343 OR2A7Q96R45 310 aa10.58□□□□□ -0.72
SOX2-OT-246ENST00000628343 THAP7Q9BT49 309 aaPredicted RBP10.58□□□□□ -0.72
SOX2-OT-246ENST00000628343 PLEKHA2Q9HB19 425 aa10.58□□□□□ -0.72
SOX2-OT-246ENST00000628343 SLC2A9Q9NRM0 540 aa10.58□□□□□ -0.72
SOX2-OT-246ENST00000628343 PKD1L1Q8TDX9 2849 aa10.58□□□□□ -0.72
SOX2-OT-246ENST00000628343 MSGN1A6NI15 193 aa10.57□□□□□ -0.72
SOX2-OT-246ENST00000628343 CREBL2O60519 120 aaPredicted RBP10.57□□□□□ -0.72
SOX2-OT-246ENST00000628343 AKAIN1P0CW23 69 aa10.57□□□□□ -0.72
SOX2-OT-246ENST00000628343 APELAP0DMC3 54 aa10.57□□□□□ -0.72
SOX2-OT-246ENST00000628343 NQO2P16083 231 aa10.57□□□□□ -0.72
SOX2-OT-246ENST00000628343 ETV6P41212 452 aa10.57□□□□□ -0.72
SOX2-OT-246ENST00000628343 RAB9AP51151 201 aa10.57□□□□□ -0.72
SOX2-OT-246ENST00000628343 TMEM65Q6PI78 240 aa10.57□□□□□ -0.72
SOX2-OT-246ENST00000628343 MMD2Q8IY49 270 aa10.57□□□□□ -0.72
SOX2-OT-246ENST00000628343 ZNF491Q8N8L2 437 aa10.57□□□□□ -0.72
SOX2-OT-246ENST00000628343 COMMD9Q9P000 198 aa10.57□□□□□ -0.72
SOX2-OT-246ENST00000628343 DISC1C4P0D8 188 aa10.56□□□□□ -0.72
SOX2-OT-246ENST00000628343 PF4P02776 101 aa10.56□□□□□ -0.72
SOX2-OT-246ENST00000628343 IL6RP08887 468 aaPredicted RBP10.56□□□□□ -0.72
SOX2-OT-246ENST00000628343 PTBP1P26599 531 aaKnown RBP eCLIP10.56□□□□□ -0.72
SOX2-OT-246ENST00000628343 S100GP29377 79 aa10.56□□□□□ -0.72
SOX2-OT-246ENST00000628343 SLC6A1P30531 599 aa10.56□□□□□ -0.72
SOX2-OT-246ENST00000628343 LPAR6P43657 344 aa10.56□□□□□ -0.72
SOX2-OT-246ENST00000628343 RND3P61587 244 aa10.56□□□□□ -0.72
SOX2-OT-246ENST00000628343 DEFB136Q30KP8 78 aa10.56□□□□□ -0.72
SOX2-OT-246ENST00000628343 Q8N402 240 aa10.56□□□□□ -0.72
SOX2-OT-246ENST00000628343 OR5M8Q8NGP6 311 aa10.56□□□□□ -0.72
SOX2-OT-246ENST00000628343 OR13C8Q8NGS7 320 aa10.56□□□□□ -0.72
SOX2-OT-246ENST00000628343 MARCH1Q8TCQ1 289 aa10.56□□□□□ -0.72
SOX2-OT-246ENST00000628343 C4orf3Q8WVX3 66 aa10.56□□□□□ -0.72
SOX2-OT-246ENST00000628343 ZNF486Q96H40 463 aaPredicted RBP10.56□□□□□ -0.72
SOX2-OT-246ENST00000628343 RAX2Q96IS3 184 aa10.56□□□□□ -0.72
SOX2-OT-246ENST00000628343 DUX3Q96PT4 197 aa10.56□□□□□ -0.72
SOX2-OT-246ENST00000628343 PHB2Q99623 299 aa10.56□□□□□ -0.72
SOX2-OT-246ENST00000628343 AIFM2Q9BRQ8 373 aa10.56□□□□□ -0.72
SOX2-OT-246ENST00000628343 GNB4Q9HAV0 340 aa10.56□□□□□ -0.72
SOX2-OT-246ENST00000628343 TMEM140Q9NV12 185 aa10.56□□□□□ -0.72
SOX2-OT-246ENST00000628343 BET1LQ9NYM9 111 aa10.56□□□□□ -0.72
SOX2-OT-246ENST00000628343 CMYA5Q8N3K9 4069 aa10.56□□□□□ -0.72
SOX2-OT-246ENST00000628343 TRAV3A0A0B4J244 114 aa10.55□□□□□ -0.72
SOX2-OT-246ENST00000628343 A0A1B0GW64 132 aa10.55□□□□□ -0.72
SOX2-OT-246ENST00000628343 MARCH11A6NNE9 402 aa10.55□□□□□ -0.72
SOX2-OT-246ENST00000628343 TEX22C9J3V5 150 aa10.55□□□□□ -0.72
SOX2-OT-246ENST00000628343 E7EUB6 86 aa10.55□□□□□ -0.72
SOX2-OT-246ENST00000628343 MPPED1O15442 326 aa10.55□□□□□ -0.72
SOX2-OT-246ENST00000628343 ACTL6BO94805 426 aa10.55□□□□□ -0.72
SOX2-OT-246ENST00000628343 MYOD1P15172 320 aa10.55□□□□□ -0.72
SOX2-OT-246ENST00000628343 RPA2P15927 270 aa10.55□□□□□ -0.72
SOX2-OT-246ENST00000628343 PIGPP57054 158 aa10.55□□□□□ -0.72
SOX2-OT-246ENST00000628343 RPL8P62917 257 aaKnown RBP10.55□□□□□ -0.72
SOX2-OT-246ENST00000628343 KLF9Q13886 244 aaPredicted RBP10.55□□□□□ -0.72
SOX2-OT-246ENST00000628343 SPANXN2Q5MJ10 180 aa10.55□□□□□ -0.72
SOX2-OT-246ENST00000628343 OR5T1Q8NG75 326 aa10.55□□□□□ -0.72
SOX2-OT-246ENST00000628343 OR51S1Q8NGJ8 323 aa10.55□□□□□ -0.72
SOX2-OT-246ENST00000628343 OR4A5Q8NH83 315 aa10.55□□□□□ -0.72
SOX2-OT-246ENST00000628343 UBE2E2Q96LR5 201 aa10.55□□□□□ -0.72
SOX2-OT-246ENST00000628343 TMEM68Q96MH6 324 aa10.55□□□□□ -0.72
SOX2-OT-246ENST00000628343 MS4A10Q96PG2 267 aa10.55□□□□□ -0.72
SOX2-OT-246ENST00000628343 P2RX4Q99571 388 aa10.55□□□□□ -0.72
SOX2-OT-246ENST00000628343 SRRQ9GZT4 340 aa10.55□□□□□ -0.72
SOX2-OT-246ENST00000628343 HRASLSQ9HDD0 168 aa10.55□□□□□ -0.72
SOX2-OT-246ENST00000628343 A6NHS1 94 aa10.54□□□□□ -0.72
SOX2-OT-246ENST00000628343 CGB1A6NKQ9 187 aa10.54□□□□□ -0.72
SOX2-OT-246ENST00000628343 I3L521 148 aa10.54□□□□□ -0.72
SOX2-OT-246ENST00000628343 UPK2O00526 184 aa10.54□□□□□ -0.72
SOX2-OT-246ENST00000628343 KRASP01116 189 aa10.54□□□□□ -0.72
SOX2-OT-246ENST00000628343 IGKV1-39P01597 117 aa10.54□□□□□ -0.72
SOX2-OT-246ENST00000628343 IGKV1D-39P04432 117 aa10.54□□□□□ -0.72
SOX2-OT-246ENST00000628343 CTSDP07339 412 aaPredicted RBP10.54□□□□□ -0.72
SOX2-OT-246ENST00000628343 HLA-GP17693 338 aa10.54□□□□□ -0.72
SOX2-OT-246ENST00000628343 MAS1LP35410 378 aa10.54□□□□□ -0.72
SOX2-OT-246ENST00000628343 G6PCP35575 357 aa10.54□□□□□ -0.72
SOX2-OT-246ENST00000628343 MRPL41Q8IXM3 137 aaKnown RBP10.54□□□□□ -0.72
SOX2-OT-246ENST00000628343 LINC00482Q8N8I6 264 aa10.54□□□□□ -0.72
SOX2-OT-246ENST00000628343 ADAD2Q8NCV1 583 aaKnown RBP10.54□□□□□ -0.72
SOX2-OT-246ENST00000628343 WFDC9Q8NEX5 89 aa10.54□□□□□ -0.72
SOX2-OT-246ENST00000628343 DMBX1Q8NFW5 382 aa10.54□□□□□ -0.72
SOX2-OT-246ENST00000628343 ZFAND1Q8TCF1 268 aa10.54□□□□□ -0.72
SOX2-OT-246ENST00000628343 OR5B12Q96R08 314 aa10.54□□□□□ -0.72
SOX2-OT-246ENST00000628343 TP53RKQ96S44 253 aa10.54□□□□□ -0.72
SOX2-OT-246ENST00000628343 SPIN2AQ99865 258 aa10.54□□□□□ -0.72
SOX2-OT-246ENST00000628343 PRRT1Q99946 306 aa10.54□□□□□ -0.72
SOX2-OT-246ENST00000628343 SPIN2BQ9BPZ2 258 aa10.54□□□□□ -0.72
SOX2-OT-246ENST00000628343 FAM212BQ9NTI7 297 aaPredicted RBP10.54□□□□□ -0.72
SOX2-OT-246ENST00000628343 SLC2A8Q9NY64 477 aa10.54□□□□□ -0.72
SOX2-OT-246ENST00000628343 VSIG4Q9Y279 399 aa10.54□□□□□ -0.72
SOX2-OT-246ENST00000628343 NBEAL1Q6ZS30 2694 aa10.54□□□□□ -0.72
SOX2-OT-246ENST00000628343 MGAM2Q2M2H8 2515 aa10.54□□□□□ -0.72
SOX2-OT-246ENST00000628343 HMX3A6NHT5 357 aa10.53□□□□□ -0.72
SOX2-OT-246ENST00000628343 H0Y980 276 aa10.53□□□□□ -0.72
SOX2-OT-246ENST00000628343 H3BUA1 57 aa10.53□□□□□ -0.72
SOX2-OT-246ENST00000628343 CCL24O00175 119 aa10.53□□□□□ -0.72
SOX2-OT-246ENST00000628343 TRGV3P03979 118 aa10.53□□□□□ -0.72
SOX2-OT-246ENST00000628343 MYCNOSP40205 109 aa10.53□□□□□ -0.72
SOX2-OT-246ENST00000628343 ECI1P42126 302 aa10.53□□□□□ -0.72
SOX2-OT-246ENST00000628343 RPL27AP46776 148 aaKnown RBP10.53□□□□□ -0.72
SOX2-OT-246ENST00000628343 TPPP2P59282 170 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms