RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 DEFA3P59666 94 aa11.61□□□□□ -0.55
PNKP-221ENST00000627317 CX3CL1P78423 397 aa11.61□□□□□ -0.55
PNKP-221ENST00000627317 POU2AF1Q16633 256 aa11.61□□□□□ -0.55
PNKP-221ENST00000627317 PRSS8Q16651 343 aa11.61□□□□□ -0.55
PNKP-221ENST00000627317 SP6Q3SY56 376 aa11.61□□□□□ -0.55
PNKP-221ENST00000627317 TMEM230Q96A57 120 aa11.61□□□□□ -0.55
PNKP-221ENST00000627317 OR2A7Q96R45 310 aa11.61□□□□□ -0.55
PNKP-221ENST00000627317 OR51J1Q9H342 316 aa11.61□□□□□ -0.55
PNKP-221ENST00000627317 TMEM140Q9NV12 185 aa11.61□□□□□ -0.55
PNKP-221ENST00000627317 KCNIP3Q9Y2W7 256 aa11.61□□□□□ -0.55
PNKP-221ENST00000627317 NOTCH1P46531 2555 aa11.61□□□□□ -0.55
PNKP-221ENST00000627317 FAM240BA0A1B0GVZ2 78 aa11.6□□□□□ -0.55
PNKP-221ENST00000627317 ATG12O94817 140 aa11.6□□□□□ -0.55
PNKP-221ENST00000627317 ANXA3P12429 323 aa11.6□□□□□ -0.55
PNKP-221ENST00000627317 UCP1P25874 307 aa11.6□□□□□ -0.55
PNKP-221ENST00000627317 G6PCP35575 357 aa11.6□□□□□ -0.55
PNKP-221ENST00000627317 NDPQ00604 133 aa11.6□□□□□ -0.55
PNKP-221ENST00000627317 DHODHQ02127 395 aa11.6□□□□□ -0.55
PNKP-221ENST00000627317 PJVKQ0ZLH3 352 aa11.6□□□□□ -0.55
PNKP-221ENST00000627317 OR4A47Q6IF82 309 aa11.6□□□□□ -0.55
PNKP-221ENST00000627317 TREML4Q6UXN2 200 aa11.6□□□□□ -0.55
PNKP-221ENST00000627317 MMD2Q8IY49 270 aa11.6□□□□□ -0.55
PNKP-221ENST00000627317 PUSL1Q8N0Z8 303 aaKnown RBP11.6□□□□□ -0.55
PNKP-221ENST00000627317 GRPEL2Q8TAA5 225 aa11.6□□□□□ -0.55
PNKP-221ENST00000627317 TMEM167AQ8TBQ9 72 aa11.6□□□□□ -0.55
PNKP-221ENST00000627317 ENKURQ8TC29 256 aa11.6□□□□□ -0.55
PNKP-221ENST00000627317 WIPF2Q8TF74 440 aaPredicted RBP11.6□□□□□ -0.55
PNKP-221ENST00000627317 ARPC1AQ92747 370 aa11.6□□□□□ -0.55
PNKP-221ENST00000627317 NOL4LQ96MY1 436 aaPredicted RBP11.6□□□□□ -0.55
PNKP-221ENST00000627317 TMEM222Q9H0R3 208 aa11.6□□□□□ -0.55
PNKP-221ENST00000627317 ZNF430Q9H8G1 570 aaPredicted RBP11.6□□□□□ -0.55
PNKP-221ENST00000627317 BET1LQ9NYM9 111 aa11.6□□□□□ -0.55
PNKP-221ENST00000627317 LINC00527Q9UJ94 153 aa11.6□□□□□ -0.55
PNKP-221ENST00000627317 PLXNB1O43157 2135 aa11.6□□□□□ -0.55
PNKP-221ENST00000627317 LINC01548A6NM66 108 aa11.59□□□□□ -0.55
PNKP-221ENST00000627317 ARPC1BO15143 372 aaKnown RBP11.59□□□□□ -0.55
PNKP-221ENST00000627317 ATP6V0E1O15342 81 aa11.59□□□□□ -0.55
PNKP-221ENST00000627317 VDAC1P21796 283 aa11.59□□□□□ -0.55
PNKP-221ENST00000627317 VAMP1P23763 118 aa11.59□□□□□ -0.55
PNKP-221ENST00000627317 SLC6A1P30531 599 aa11.59□□□□□ -0.55
PNKP-221ENST00000627317 AKR1C2P52895 323 aa11.59□□□□□ -0.55
PNKP-221ENST00000627317 IFITM3Q01628 133 aa11.59□□□□□ -0.55
PNKP-221ENST00000627317 FXYD3Q14802 87 aa11.59□□□□□ -0.55
PNKP-221ENST00000627317 TNXAQ16473 311 aa11.59□□□□□ -0.55
PNKP-221ENST00000627317 TMEM128Q5BJH2 165 aa11.59□□□□□ -0.55
PNKP-221ENST00000627317 ZNF562Q6V9R5 426 aa11.59□□□□□ -0.55
PNKP-221ENST00000627317 STPG2Q8N412 459 aa11.59□□□□□ -0.55
PNKP-221ENST00000627317 OR4A5Q8NH83 315 aa11.59□□□□□ -0.55
PNKP-221ENST00000627317 RNASE11Q8TAA1 199 aaKnown RBP11.59□□□□□ -0.55
PNKP-221ENST00000627317 CHPT1Q8WUD6 406 aa11.59□□□□□ -0.55
PNKP-221ENST00000627317 GALNT14Q96FL9 552 aa11.59□□□□□ -0.55
PNKP-221ENST00000627317 C20orf85Q9H1P6 137 aa11.59□□□□□ -0.55
PNKP-221ENST00000627317 FLVCR2Q9UPI3 526 aa11.59□□□□□ -0.55
PNKP-221ENST00000627317 TNCP24821 2201 aa11.58□□□□□ -0.56
PNKP-221ENST00000627317 IGKV1-39P01597 117 aa11.58□□□□□ -0.56
PNKP-221ENST00000627317 IGKV1D-39P04432 117 aa11.58□□□□□ -0.56
PNKP-221ENST00000627317 TCRBP04435 133 aa11.58□□□□□ -0.56
PNKP-221ENST00000627317 UBE2MP61081 183 aaKnown RBP11.58□□□□□ -0.56
PNKP-221ENST00000627317 RPL8P62917 257 aaKnown RBP11.58□□□□□ -0.56
PNKP-221ENST00000627317 SLC35B1P78383 322 aa11.58□□□□□ -0.56
PNKP-221ENST00000627317 ECSCRQ19T08 205 aa11.58□□□□□ -0.56
PNKP-221ENST00000627317 H2BFWTQ7Z2G1 175 aa11.58□□□□□ -0.56
PNKP-221ENST00000627317 CENPVQ7Z7K6 275 aaPredicted RBP11.58□□□□□ -0.56
PNKP-221ENST00000627317 SLC25A42Q86VD7 318 aa11.58□□□□□ -0.56
PNKP-221ENST00000627317 ZNF695Q8IW36 515 aa11.58□□□□□ -0.56
PNKP-221ENST00000627317 GON7Q9BXV9 100 aa11.58□□□□□ -0.56
PNKP-221ENST00000627317 WNT10AQ9GZT5 417 aa11.58□□□□□ -0.56
PNKP-221ENST00000627317 PSMB11A5LHX3 300 aa11.57□□□□□ -0.56
PNKP-221ENST00000627317 UPK2O00526 184 aa11.57□□□□□ -0.56
PNKP-221ENST00000627317 SNAPC5O75971 98 aa11.57□□□□□ -0.56
PNKP-221ENST00000627317 IGF1P05019 195 aa11.57□□□□□ -0.56
PNKP-221ENST00000627317 HLA-GP17693 338 aa11.57□□□□□ -0.56
PNKP-221ENST00000627317 ANXA7P20073 488 aaKnown RBP11.57□□□□□ -0.56
PNKP-221ENST00000627317 MAS1LP35410 378 aa11.57□□□□□ -0.56
PNKP-221ENST00000627317 SUPT4H1P63272 117 aaKnown RBP11.57□□□□□ -0.56
PNKP-221ENST00000627317 SRPXP78539 464 aa11.57□□□□□ -0.56
PNKP-221ENST00000627317 PPP1R1AQ13522 171 aa11.57□□□□□ -0.56
PNKP-221ENST00000627317 TMEM187Q14656 261 aa11.57□□□□□ -0.56
PNKP-221ENST00000627317 MRGPRG-AS1Q2M3A8 158 aa11.57□□□□□ -0.56
PNKP-221ENST00000627317 GLYATL2Q8WU03 294 aa11.57□□□□□ -0.56
PNKP-221ENST00000627317 SRSF12Q8WXF0 261 aaKnown RBP11.57□□□□□ -0.56
PNKP-221ENST00000627317 RBPMSQ93062 196 aaKnown RBP11.57□□□□□ -0.56
PNKP-221ENST00000627317 RRNAD1Q96FB5 475 aaKnown RBP11.57□□□□□ -0.56
PNKP-221ENST00000627317 SEC22AQ96IW7 307 aa11.57□□□□□ -0.56
PNKP-221ENST00000627317 PHB2Q99623 299 aa11.57□□□□□ -0.56
PNKP-221ENST00000627317 FAM103A1Q9BTL3 118 aaKnown RBP11.57□□□□□ -0.56
PNKP-221ENST00000627317 NUDT15Q9NV35 164 aa11.57□□□□□ -0.56
PNKP-221ENST00000627317 ZNF580Q9UK33 172 aa11.57□□□□□ -0.56
PNKP-221ENST00000627317 FBXO7Q9Y3I1 522 aa11.57□□□□□ -0.56
PNKP-221ENST00000627317 WSB1Q9Y6I7 421 aa11.57□□□□□ -0.56
PNKP-221ENST00000627317 WNK1Q9H4A3 2382 aa11.57□□□□□ -0.56
PNKP-221ENST00000627317 TRAV6A0A075B6T7 132 aa11.56□□□□□ -0.56
PNKP-221ENST00000627317 TRAV41A0A0B4J266 112 aa11.56□□□□□ -0.56
PNKP-221ENST00000627317 M0QZ24 198 aa11.56□□□□□ -0.56
PNKP-221ENST00000627317 CDS2O95674 445 aa11.56□□□□□ -0.56
PNKP-221ENST00000627317 TSPAN15O95858 294 aa11.56□□□□□ -0.56
PNKP-221ENST00000627317 RPL27AP46776 148 aaKnown RBP11.56□□□□□ -0.56
PNKP-221ENST00000627317 SSBP2P81877 361 aaPredicted RBP11.56□□□□□ -0.56
PNKP-221ENST00000627317 TMEM267Q0VDI3 215 aaPredicted RBP11.56□□□□□ -0.56
PNKP-221ENST00000627317 C10orf55Q5SWW7 151 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms