RNA–Protein interactions for RNA: ENST00000627000.1

CHRNA4-209, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,192 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-209ENST00000627000 ELLP55199 621 aaPredicted RBP16.03■□□□□ 0.16
CHRNA4-209ENST00000627000 OR13D1Q8NGV5 346 aa16.03■□□□□ 0.16
CHRNA4-209ENST00000627000 DCHS2Q6V1P9 2916 aa16.03■□□□□ 0.16
CHRNA4-209ENST00000627000 HRNRQ86YZ3 2850 aaPredicted RBP16.02■□□□□ 0.16
CHRNA4-209ENST00000627000 IGHV2-70P01814 119 aa16.02■□□□□ 0.16
CHRNA4-209ENST00000627000 PPOXP50336 477 aa16.02■□□□□ 0.16
CHRNA4-209ENST00000627000 GNB2P62879 340 aa16.02■□□□□ 0.16
CHRNA4-209ENST00000627000 TLE4Q04727 773 aa16.02■□□□□ 0.16
CHRNA4-209ENST00000627000 ZNF726P1Q15940 193 aa16.02■□□□□ 0.16
CHRNA4-209ENST00000627000 ATP6V1FQ16864 119 aa16.02■□□□□ 0.16
CHRNA4-209ENST00000627000 DPPA3Q6W0C5 159 aa16.02■□□□□ 0.16
CHRNA4-209ENST00000627000 SSX7Q7RTT5 188 aa16.02■□□□□ 0.16
CHRNA4-209ENST00000627000 ZNF429Q86V71 674 aa16.02■□□□□ 0.16
CHRNA4-209ENST00000627000 C11orf42Q8N5U0 333 aa16.02■□□□□ 0.16
CHRNA4-209ENST00000627000 PINX1Q96BK5 328 aaKnown RBP16.02■□□□□ 0.16
CHRNA4-209ENST00000627000 HEYLQ9NQ87 328 aaPredicted RBP16.02■□□□□ 0.16
CHRNA4-209ENST00000627000 CACNA1AO00555 2505 aa16.02■□□□□ 0.16
CHRNA4-209ENST00000627000 EIF3GO75821 320 aaKnown RBP eCLIP16.02■□□□□ 0.15
CHRNA4-209ENST00000627000 IFNA10P01566 189 aa16.02■□□□□ 0.15
CHRNA4-209ENST00000627000 IFNA4P05014 189 aa16.02■□□□□ 0.15
CHRNA4-209ENST00000627000 DLX1P56177 255 aa16.02■□□□□ 0.15
CHRNA4-209ENST00000627000 PDLIM3Q53GG5 364 aaPredicted RBP16.02■□□□□ 0.15
CHRNA4-209ENST00000627000 ABHD12Q8N2K0 398 aa16.02■□□□□ 0.15
CHRNA4-209ENST00000627000 PBDC1Q9BVG4 233 aa16.02■□□□□ 0.15
CHRNA4-209ENST00000627000 J3QR06 171 aa16.01■□□□□ 0.15
CHRNA4-209ENST00000627000 RRHO14718 337 aa16.01■□□□□ 0.15
CHRNA4-209ENST00000627000 HRASP01112 189 aa16.01■□□□□ 0.15
CHRNA4-209ENST00000627000 SOD3P08294 240 aa16.01■□□□□ 0.15
CHRNA4-209ENST00000627000 POU2AF1Q16633 256 aa16.01■□□□□ 0.15
CHRNA4-209ENST00000627000 RTL8BQ17RB0 113 aa16.01■□□□□ 0.15
CHRNA4-209ENST00000627000 ZNF841Q6ZN19 808 aa16.01■□□□□ 0.15
CHRNA4-209ENST00000627000 SPTBN1Q01082 2364 aaKnown RBP16.01■□□□□ 0.15
CHRNA4-209ENST00000627000 FGF7P21781 194 aa16■□□□□ 0.15
CHRNA4-209ENST00000627000 RPL35P42766 123 aaKnown RBP16■□□□□ 0.15
CHRNA4-209ENST00000627000 SERF2P84101 59 aa16■□□□□ 0.15
CHRNA4-209ENST00000627000 PRB3Q04118 309 aaPredicted RBP16■□□□□ 0.15
CHRNA4-209ENST00000627000 HAGHQ16775 308 aa16■□□□□ 0.15
CHRNA4-209ENST00000627000 TMEM88Q6PEY1 159 aa16■□□□□ 0.15
CHRNA4-209ENST00000627000 OR10X1Q8NGY0 326 aa16■□□□□ 0.15
CHRNA4-209ENST00000627000 TMEM170AQ8WVE7 144 aa16■□□□□ 0.15
CHRNA4-209ENST00000627000 C12orf57Q99622 126 aa16■□□□□ 0.15
CHRNA4-209ENST00000627000 HIPK2Q9H2X6 1198 aa16■□□□□ 0.15
CHRNA4-209ENST00000627000 TMEM14BQ9NUH8 114 aa16■□□□□ 0.15
CHRNA4-209ENST00000627000 FOXA2Q9Y261 457 aaPredicted RBP16■□□□□ 0.15
CHRNA4-209ENST00000627000 RBFOX3A6NFN3 312 aa16■□□□□ 0.15
CHRNA4-209ENST00000627000 IGKV1D-33P01593 117 aa16■□□□□ 0.15
CHRNA4-209ENST00000627000 IGKV1-33P01594 117 aa16■□□□□ 0.15
CHRNA4-209ENST00000627000 IGHV1-8P0DP01 117 aa16■□□□□ 0.15
CHRNA4-209ENST00000627000 VWC2Q2TAL6 325 aa16■□□□□ 0.15
CHRNA4-209ENST00000627000 CLCC1Q96S66 551 aa16■□□□□ 0.15
CHRNA4-209ENST00000627000 KIAA1456Q9P272 454 aa16■□□□□ 0.15
CHRNA4-209ENST00000627000 RALYQ9UKM9 306 aaKnown RBP16■□□□□ 0.15
CHRNA4-209ENST00000627000 PKD1L2Q7Z442 2459 aa16■□□□□ 0.15
CHRNA4-209ENST00000627000 MALRD1Q5VYJ5 2156 aa15.99■□□□□ 0.15
CHRNA4-209ENST00000627000 A0A1B0GW64 132 aa15.99■□□□□ 0.15
CHRNA4-209ENST00000627000 GNLYP22749 145 aa15.99■□□□□ 0.15
CHRNA4-209ENST00000627000 RAB2AP61019 212 aa15.99■□□□□ 0.15
CHRNA4-209ENST00000627000 ACSM6Q6P461 480 aa15.99■□□□□ 0.15
CHRNA4-209ENST00000627000 LCN15Q6UWW0 184 aa15.99■□□□□ 0.15
CHRNA4-209ENST00000627000 RCC1LQ96I51 464 aaKnown RBP15.99■□□□□ 0.15
CHRNA4-209ENST00000627000 CBLN4Q9NTU7 201 aa15.99■□□□□ 0.15
CHRNA4-209ENST00000627000 A0A1W2PPR1 153 aa15.99■□□□□ 0.15
CHRNA4-209ENST00000627000 BTBD17A6NE02 478 aa15.99■□□□□ 0.15
CHRNA4-209ENST00000627000 H0YJW9 148 aa15.99■□□□□ 0.15
CHRNA4-209ENST00000627000 IL6RP08887 468 aaPredicted RBP15.99■□□□□ 0.15
CHRNA4-209ENST00000627000 HSPE1P61604 102 aaKnown RBP15.99■□□□□ 0.15
CHRNA4-209ENST00000627000 TMEM41BQ5BJD5 291 aa15.99■□□□□ 0.15
CHRNA4-209ENST00000627000 C11orf71Q6IPW1 123 aa15.99■□□□□ 0.15
CHRNA4-209ENST00000627000 ZNF596Q8TC21 504 aa15.99■□□□□ 0.15
CHRNA4-209ENST00000627000 RAB39BQ96DA2 213 aa15.99■□□□□ 0.15
CHRNA4-209ENST00000627000 TIMM9Q9Y5J7 89 aa15.99■□□□□ 0.15
CHRNA4-209ENST00000627000 KPTNQ9Y664 436 aa15.99■□□□□ 0.15
CHRNA4-209ENST00000627000 TNCP24821 2201 aa15.98■□□□□ 0.15
CHRNA4-209ENST00000627000 OPN1MWP04001 364 aa15.98■□□□□ 0.15
CHRNA4-209ENST00000627000 OPN1MW2P0DN77 364 aa15.98■□□□□ 0.15
CHRNA4-209ENST00000627000 OPN1MW3P0DN78 364 aa15.98■□□□□ 0.15
CHRNA4-209ENST00000627000 OR13C7P0DN81 318 aa15.98■□□□□ 0.15
CHRNA4-209ENST00000627000 FGF8P55075 233 aaPredicted RBP15.98■□□□□ 0.15
CHRNA4-209ENST00000627000 ETV3LQ6ZN32 361 aa15.98■□□□□ 0.15
CHRNA4-209ENST00000627000 CENPVQ7Z7K6 275 aaPredicted RBP15.98■□□□□ 0.15
CHRNA4-209ENST00000627000 CBLN2Q8IUK8 224 aa15.98■□□□□ 0.15
CHRNA4-209ENST00000627000 LINC00311Q8N616 119 aa15.98■□□□□ 0.15
CHRNA4-209ENST00000627000 HINT2Q9BX68 163 aa15.98■□□□□ 0.15
CHRNA4-209ENST00000627000 RAB1BQ9H0U4 201 aa15.98■□□□□ 0.15
CHRNA4-209ENST00000627000 OR51B2Q9Y5P1 312 aa15.98■□□□□ 0.15
CHRNA4-209ENST00000627000 TRBV23-1A0A0A0MS06 115 aa15.97■□□□□ 0.15
CHRNA4-209ENST00000627000 UPK2O00526 184 aa15.97■□□□□ 0.15
CHRNA4-209ENST00000627000 SAA1P0DJI8 122 aaPredicted RBP15.97■□□□□ 0.15
CHRNA4-209ENST00000627000 MDKP21741 143 aaPredicted RBP15.97■□□□□ 0.15
CHRNA4-209ENST00000627000 OR5AN1Q8NGI8 311 aa15.97■□□□□ 0.15
CHRNA4-209ENST00000627000 ST6GALNAC6Q969X2 333 aa15.97■□□□□ 0.15
CHRNA4-209ENST00000627000 NPCDR1Q9BY65 106 aa15.97■□□□□ 0.15
CHRNA4-209ENST00000627000 SLC35B3Q9H1N7 401 aa15.97■□□□□ 0.15
CHRNA4-209ENST00000627000 A0A087X0M5 115 aa15.97■□□□□ 0.15
CHRNA4-209ENST00000627000 A0A1B0GX30 115 aa15.97■□□□□ 0.15
CHRNA4-209ENST00000627000 HBE1P02100 147 aa15.97■□□□□ 0.15
CHRNA4-209ENST00000627000 APOA2P02652 100 aa15.97■□□□□ 0.15
CHRNA4-209ENST00000627000 C8orf31Q8N9H6 132 aa15.97■□□□□ 0.15
CHRNA4-209ENST00000627000 OR9G1Q8NH87 305 aa15.97■□□□□ 0.15
CHRNA4-209ENST00000627000 CLDND2Q8NHS1 167 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms