RNA–Protein interactions for RNA: ENST00000626948.2

SOX2-OT-241, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 836 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-241ENST00000626948 VCX3BQ9H321 246 aa10.2□□□□□ -0.78
SOX2-OT-241ENST00000626948 CCL28Q9NRJ3 127 aa10.2□□□□□ -0.78
SOX2-OT-241ENST00000626948 RHBDL2Q9NX52 303 aa10.2□□□□□ -0.78
SOX2-OT-241ENST00000626948 TAS2R8Q9NYW2 309 aa10.2□□□□□ -0.78
SOX2-OT-241ENST00000626948 KLK9Q9UKQ9 250 aa10.2□□□□□ -0.78
SOX2-OT-241ENST00000626948 ALMS1Q8TCU4 4167 aa10.19□□□□□ -0.78
SOX2-OT-241ENST00000626948 TRAV3A0A0B4J244 114 aa10.19□□□□□ -0.78
SOX2-OT-241ENST00000626948 RBMY1BA6NDE4 496 aaKnown RBP10.19□□□□□ -0.78
SOX2-OT-241ENST00000626948 RBMY1EA6NEQ0 496 aaKnown RBP10.19□□□□□ -0.78
SOX2-OT-241ENST00000626948 ERICH4A6NGS2 130 aa10.19□□□□□ -0.78
SOX2-OT-241ENST00000626948 MPPED1O15442 326 aa10.19□□□□□ -0.78
SOX2-OT-241ENST00000626948 TNFSF12O43508 249 aa10.19□□□□□ -0.78
SOX2-OT-241ENST00000626948 OR2C1O95371 312 aa10.19□□□□□ -0.78
SOX2-OT-241ENST00000626948 ATP6V1G2O95670 118 aa10.19□□□□□ -0.78
SOX2-OT-241ENST00000626948 FCER2P06734 321 aa10.19□□□□□ -0.78
SOX2-OT-241ENST00000626948 CTXN2P0C2S0 81 aa10.19□□□□□ -0.78
SOX2-OT-241ENST00000626948 RBMY1DP0C7P1 496 aaKnown RBP10.19□□□□□ -0.78
SOX2-OT-241ENST00000626948 TGFBR1P36897 503 aa10.19□□□□□ -0.78
SOX2-OT-241ENST00000626948 DEFB114Q30KQ6 69 aa10.19□□□□□ -0.78
SOX2-OT-241ENST00000626948 LCN12Q6JVE5 192 aa10.19□□□□□ -0.78
SOX2-OT-241ENST00000626948 TPRA1Q86W33 373 aa10.19□□□□□ -0.78
SOX2-OT-241ENST00000626948 Q8N402 240 aa10.19□□□□□ -0.78
SOX2-OT-241ENST00000626948 NECAP1Q8NC96 275 aa10.19□□□□□ -0.78
SOX2-OT-241ENST00000626948 CACNG8Q8WXS5 425 aa10.19□□□□□ -0.78
SOX2-OT-241ENST00000626948 SPIN2AQ99865 258 aa10.19□□□□□ -0.78
SOX2-OT-241ENST00000626948 SPIN2BQ9BPZ2 258 aa10.19□□□□□ -0.78
SOX2-OT-241ENST00000626948 DCUN1D5Q9BTE7 237 aa10.19□□□□□ -0.78
SOX2-OT-241ENST00000626948 CENPOQ9BU64 300 aa10.19□□□□□ -0.78
SOX2-OT-241ENST00000626948 HIPK2Q9H2X6 1198 aa10.19□□□□□ -0.78
SOX2-OT-241ENST00000626948 PLEKHA3Q9HB20 300 aa10.19□□□□□ -0.78
SOX2-OT-241ENST00000626948 C2orf70A6NJV1 201 aa10.18□□□□□ -0.78
SOX2-OT-241ENST00000626948 NPIPB5A8MRT5 1133 aa10.18□□□□□ -0.78
SOX2-OT-241ENST00000626948 CRYGCP07315 174 aa10.18□□□□□ -0.78
SOX2-OT-241ENST00000626948 CTRB1P17538 263 aa10.18□□□□□ -0.78
SOX2-OT-241ENST00000626948 GNG2P59768 71 aa10.18□□□□□ -0.78
SOX2-OT-241ENST00000626948 ARL6IP1Q15041 203 aa10.18□□□□□ -0.78
SOX2-OT-241ENST00000626948 CTRB2Q6GPI1 263 aa10.18□□□□□ -0.78
SOX2-OT-241ENST00000626948 SSX9Q7RTT3 188 aa10.18□□□□□ -0.78
SOX2-OT-241ENST00000626948 DEFB125Q8N687 156 aa10.18□□□□□ -0.78
SOX2-OT-241ENST00000626948 BEST4Q8NFU0 473 aa10.18□□□□□ -0.78
SOX2-OT-241ENST00000626948 TCTEX1D2Q8WW35 142 aa10.18□□□□□ -0.78
SOX2-OT-241ENST00000626948 OR2A7Q96R45 310 aa10.18□□□□□ -0.78
SOX2-OT-241ENST00000626948 HSD17B10Q99714 261 aaKnown RBP10.18□□□□□ -0.78
SOX2-OT-241ENST00000626948 FAM110AQ9BQ89 295 aa10.18□□□□□ -0.78
SOX2-OT-241ENST00000626948 SPATA25Q9BR10 227 aa10.18□□□□□ -0.78
SOX2-OT-241ENST00000626948 ZC4H2Q9NQZ6 224 aa10.18□□□□□ -0.78
SOX2-OT-241ENST00000626948 SLC2A9Q9NRM0 540 aa10.18□□□□□ -0.78
SOX2-OT-241ENST00000626948 ZNF257Q9Y2Q1 563 aa10.18□□□□□ -0.78
SOX2-OT-241ENST00000626948 PRELID3BQ9Y3B1 194 aa10.18□□□□□ -0.78
SOX2-OT-241ENST00000626948 TRAV18A0A075B6X5 111 aa10.17□□□□□ -0.78
SOX2-OT-241ENST00000626948 MFSD2BA6NFX1 497 aa10.17□□□□□ -0.78
SOX2-OT-241ENST00000626948 REG1AP05451 166 aa10.17□□□□□ -0.78
SOX2-OT-241ENST00000626948 FOLR2P14207 255 aa10.17□□□□□ -0.78
SOX2-OT-241ENST00000626948 CD36P16671 472 aa10.17□□□□□ -0.78
SOX2-OT-241ENST00000626948 KIR2DS2P43631 304 aa10.17□□□□□ -0.78
SOX2-OT-241ENST00000626948 RPL27AP46776 148 aaKnown RBP10.17□□□□□ -0.78
SOX2-OT-241ENST00000626948 HOGA1Q86XE5 327 aa10.17□□□□□ -0.78
SOX2-OT-241ENST00000626948 OR2K2Q8NGT1 345 aa10.17□□□□□ -0.78
SOX2-OT-241ENST00000626948 OR4S2Q8NH73 311 aa10.17□□□□□ -0.78
SOX2-OT-241ENST00000626948 WDR89Q96FK6 387 aaPredicted RBP10.17□□□□□ -0.78
SOX2-OT-241ENST00000626948 FYTTD1Q96QD9 318 aaKnown RBP10.17□□□□□ -0.78
SOX2-OT-241ENST00000626948 NEURL2Q9BR09 285 aa10.17□□□□□ -0.78
SOX2-OT-241ENST00000626948 FBXL7Q9UJT9 491 aa10.17□□□□□ -0.78
SOX2-OT-241ENST00000626948 SSR3Q9UNL2 185 aa10.17□□□□□ -0.78
SOX2-OT-241ENST00000626948 MRPS7Q9Y2R9 242 aaKnown RBP10.17□□□□□ -0.78
SOX2-OT-241ENST00000626948 IGLV11-55A0A075B6I3 123 aa10.16□□□□□ -0.78
SOX2-OT-241ENST00000626948 TMEM213A2RRL7 107 aa10.16□□□□□ -0.78
SOX2-OT-241ENST00000626948 SLC22A5O76082 557 aa10.16□□□□□ -0.78
SOX2-OT-241ENST00000626948 ACTL6BO94805 426 aa10.16□□□□□ -0.78
SOX2-OT-241ENST00000626948 PPYP01298 95 aa10.16□□□□□ -0.78
SOX2-OT-241ENST00000626948 PSMB6P28072 239 aa10.16□□□□□ -0.78
SOX2-OT-241ENST00000626948 FCGR2CP31995 323 aa10.16□□□□□ -0.78
SOX2-OT-241ENST00000626948 CD81P60033 236 aa10.16□□□□□ -0.78
SOX2-OT-241ENST00000626948 TATDN3Q17R31 274 aa10.16□□□□□ -0.78
SOX2-OT-241ENST00000626948 TIMM50Q3ZCQ8 353 aa10.16□□□□□ -0.78
SOX2-OT-241ENST00000626948 OR4A47Q6IF82 309 aa10.16□□□□□ -0.78
SOX2-OT-241ENST00000626948 CLEC19AQ6UXS0 136 aa10.16□□□□□ -0.78
SOX2-OT-241ENST00000626948 ZNF66Q6ZN08 573 aa10.16□□□□□ -0.78
SOX2-OT-241ENST00000626948 GTSCR1Q86UQ5 136 aa10.16□□□□□ -0.78
SOX2-OT-241ENST00000626948 OR13F1Q8NGS4 319 aa10.16□□□□□ -0.78
SOX2-OT-241ENST00000626948 SECTM1Q8WVN6 248 aa10.16□□□□□ -0.78
SOX2-OT-241ENST00000626948 ISOC1Q96CN7 298 aa10.16□□□□□ -0.78
SOX2-OT-241ENST00000626948 KCTD12Q96CX2 325 aaKnown RBP10.16□□□□□ -0.78
SOX2-OT-241ENST00000626948 AUNIPQ9H7T9 357 aa10.16□□□□□ -0.78
SOX2-OT-241ENST00000626948 PEMTQ9UBM1 199 aa10.16□□□□□ -0.78
SOX2-OT-241ENST00000626948 MLXQ9UH92 298 aa10.16□□□□□ -0.78
SOX2-OT-241ENST00000626948 CEPT1Q9Y6K0 416 aa10.16□□□□□ -0.78
SOX2-OT-241ENST00000626948 IGLC7A0M8Q6 106 aa10.15□□□□□ -0.78
SOX2-OT-241ENST00000626948 MEIS3P1A6NDR6 274 aa10.15□□□□□ -0.78
SOX2-OT-241ENST00000626948 LGALS9O00182 355 aa10.15□□□□□ -0.78
SOX2-OT-241ENST00000626948 SULT1C2O00338 296 aa10.15□□□□□ -0.78
SOX2-OT-241ENST00000626948 AIREO43918 545 aa10.15□□□□□ -0.78
SOX2-OT-241ENST00000626948 OR2B8PP59922 312 aa10.15□□□□□ -0.78
SOX2-OT-241ENST00000626948 IDNKQ5T6J7 187 aa10.15□□□□□ -0.78
SOX2-OT-241ENST00000626948 UNQ9165/PRO28630Q6UXU0 137 aa10.15□□□□□ -0.78
SOX2-OT-241ENST00000626948 ZNF818PQ6ZRF7 136 aa10.15□□□□□ -0.78
SOX2-OT-241ENST00000626948 GPHB5Q86YW7 130 aa10.15□□□□□ -0.78
SOX2-OT-241ENST00000626948 FCGR1BQ92637 280 aa10.15□□□□□ -0.78
SOX2-OT-241ENST00000626948 ZNF414Q96IQ9 312 aa10.15□□□□□ -0.78
SOX2-OT-241ENST00000626948 TUBA4BQ9H853 241 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms