RNA–Protein interactions for RNA: ENST00000623364.3

CDKL5-204, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 3

Gene CDKL5, Length 483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-204ENST00000623364 MAS1P04201 325 aa4.02□□□□□ -1.77
CDKL5-204ENST00000623364 CHTF8P0CG12 524 aa4.02□□□□□ -1.77
CDKL5-204ENST00000623364 HLA-DRB4P13762 266 aa4.02□□□□□ -1.77
CDKL5-204ENST00000623364 GATA2P23769 480 aaPredicted RBP4.02□□□□□ -1.77
CDKL5-204ENST00000623364 TSPOP30536 169 aa4.02□□□□□ -1.77
CDKL5-204ENST00000623364 CAPGP40121 348 aa4.02□□□□□ -1.77
CDKL5-204ENST00000623364 RELQ04864 619 aaPredicted RBP4.02□□□□□ -1.77
CDKL5-204ENST00000623364 C10orf55Q5SWW7 151 aa4.02□□□□□ -1.77
CDKL5-204ENST00000623364 ELP2Q6IA86 826 aa4.02□□□□□ -1.77
CDKL5-204ENST00000623364 IDO2Q6ZQW0 420 aa4.02□□□□□ -1.77
CDKL5-204ENST00000623364 C9orf47Q6ZRZ4 202 aa4.02□□□□□ -1.77
CDKL5-204ENST00000623364 WFDC10BQ8IUB3 73 aa4.02□□□□□ -1.77
CDKL5-204ENST00000623364 ZNF664Q8N3J9 261 aa4.02□□□□□ -1.77
CDKL5-204ENST00000623364 MS4A15Q8N5U1 240 aa4.02□□□□□ -1.77
CDKL5-204ENST00000623364 Q8N976 141 aa4.02□□□□□ -1.77
CDKL5-204ENST00000623364 OR4K15Q8NH41 348 aa4.02□□□□□ -1.77
CDKL5-204ENST00000623364 VN1R17PQ8TDU5 208 aa4.02□□□□□ -1.77
CDKL5-204ENST00000623364 SPSB1Q96BD6 273 aa4.02□□□□□ -1.77
CDKL5-204ENST00000623364 OPALINQ96PE5 141 aa4.02□□□□□ -1.77
CDKL5-204ENST00000623364 TMEM231Q9H6L2 316 aa4.02□□□□□ -1.77
CDKL5-204ENST00000623364 VSIRQ9H7M9 311 aa4.02□□□□□ -1.77
CDKL5-204ENST00000623364 MED20Q9H944 212 aa4.02□□□□□ -1.77
CDKL5-204ENST00000623364 TAS2R1Q9NYW7 299 aa4.02□□□□□ -1.77
CDKL5-204ENST00000623364 LAMP5Q9UJQ1 280 aa4.02□□□□□ -1.77
CDKL5-204ENST00000623364 SAMHD1Q9Y3Z3 626 aaKnown RBP4.02□□□□□ -1.77
CDKL5-204ENST00000623364 HLA-DRB4X5D2U9 266 aa4.02□□□□□ -1.77
CDKL5-204ENST00000623364 IGHV3-66A0A0C4DH42 116 aa4.01□□□□□ -1.77
CDKL5-204ENST00000623364 IGKV1-9A0A0C4DH69 117 aa4.01□□□□□ -1.77
CDKL5-204ENST00000623364 ISLRO14498 428 aa4.01□□□□□ -1.77
CDKL5-204ENST00000623364 SELENOFO60613 162 aa4.01□□□□□ -1.77
CDKL5-204ENST00000623364 RCC1P18754 421 aaPredicted RBP4.01□□□□□ -1.77
CDKL5-204ENST00000623364 ATF1P18846 271 aa4.01□□□□□ -1.77
CDKL5-204ENST00000623364 CCL1P22362 96 aa4.01□□□□□ -1.77
CDKL5-204ENST00000623364 RIDAP52758 137 aaKnown RBP4.01□□□□□ -1.77
CDKL5-204ENST00000623364 SNRPD3P62318 126 aaKnown RBP4.01□□□□□ -1.77
CDKL5-204ENST00000623364 CACNG7P62955 275 aa4.01□□□□□ -1.77
CDKL5-204ENST00000623364 KISS1Q15726 138 aa4.01□□□□□ -1.77
CDKL5-204ENST00000623364 ZNF79Q15937 498 aa4.01□□□□□ -1.77
CDKL5-204ENST00000623364 PIGYQ3MUY2 71 aa4.01□□□□□ -1.77
CDKL5-204ENST00000623364 CYBRD1Q53TN4 286 aa4.01□□□□□ -1.77
CDKL5-204ENST00000623364 LYPD5Q6UWN5 251 aa4.01□□□□□ -1.77
CDKL5-204ENST00000623364 ZFP41Q8N8Y5 198 aa4.01□□□□□ -1.77
CDKL5-204ENST00000623364 EIF1ADQ8N9N8 165 aaKnown RBP4.01□□□□□ -1.77
CDKL5-204ENST00000623364 C7orf33Q8WU49 177 aa4.01□□□□□ -1.77
CDKL5-204ENST00000623364 GALMQ96C23 342 aa4.01□□□□□ -1.77
CDKL5-204ENST00000623364 TLCD1Q96CP7 247 aa4.01□□□□□ -1.77
CDKL5-204ENST00000623364 ABHD14BQ96IU4 210 aa4.01□□□□□ -1.77
CDKL5-204ENST00000623364 TXN2Q99757 166 aa4.01□□□□□ -1.77
CDKL5-204ENST00000623364 GINS3Q9BRX5 216 aa4.01□□□□□ -1.77
CDKL5-204ENST00000623364 IFT22Q9H7X7 185 aa4.01□□□□□ -1.77
CDKL5-204ENST00000623364 OR52A1Q9UKL2 312 aa4.01□□□□□ -1.77
CDKL5-204ENST00000623364 RAP2CQ9Y3L5 183 aa4.01□□□□□ -1.77
CDKL5-204ENST00000623364 ICOSQ9Y6W8 199 aa4.01□□□□□ -1.77
CDKL5-204ENST00000623364 A0A1W2PRQ8 180 aa4□□□□□ -1.77
CDKL5-204ENST00000623364 IBA57-AS1B1ANH7 110 aa4□□□□□ -1.77
CDKL5-204ENST00000623364 TEX22C9J3V5 150 aa4□□□□□ -1.77
CDKL5-204ENST00000623364 PHOX2AO14813 284 aa4□□□□□ -1.77
CDKL5-204ENST00000623364 PITX3O75364 302 aa4□□□□□ -1.77
CDKL5-204ENST00000623364 NAPSAO96009 420 aa4□□□□□ -1.77
CDKL5-204ENST00000623364 KITP10721 976 aa4□□□□□ -1.77
CDKL5-204ENST00000623364 AREGP15514 252 aa4□□□□□ -1.77
CDKL5-204ENST00000623364 KRT4P19013 534 aa4□□□□□ -1.77
CDKL5-204ENST00000623364 ALOX5APP20292 161 aa4□□□□□ -1.77
CDKL5-204ENST00000623364 CRHBPP24387 322 aa4□□□□□ -1.77
CDKL5-204ENST00000623364 CALRP27797 417 aaKnown RBP4□□□□□ -1.77
CDKL5-204ENST00000623364 PAFAH1B1P43034 410 aa4□□□□□ -1.77
CDKL5-204ENST00000623364 PSMD7P51665 324 aa4□□□□□ -1.77
CDKL5-204ENST00000623364 PAX9P55771 341 aa4□□□□□ -1.77
CDKL5-204ENST00000623364 CNBPP62633 177 aaKnown RBP4□□□□□ -1.77
CDKL5-204ENST00000623364 MRPS15P82914 257 aaKnown RBP4□□□□□ -1.77
CDKL5-204ENST00000623364 DGCR6Q14129 220 aa4□□□□□ -1.77
CDKL5-204ENST00000623364 PAGE3Q5JUK9 113 aa4□□□□□ -1.77
CDKL5-204ENST00000623364 MMD2Q8IY49 270 aa4□□□□□ -1.77
CDKL5-204ENST00000623364 ZNF709Q8N972 641 aa4□□□□□ -1.77
CDKL5-204ENST00000623364 CCDC54Q8NEL0 328 aa4□□□□□ -1.77
CDKL5-204ENST00000623364 DCANP1Q8TF63 244 aa4□□□□□ -1.77
CDKL5-204ENST00000623364 OTULINQ96BN8 352 aa4□□□□□ -1.77
CDKL5-204ENST00000623364 PELI1Q96FA3 418 aa4□□□□□ -1.77
CDKL5-204ENST00000623364 VSIG2Q96IQ7 327 aa4□□□□□ -1.77
CDKL5-204ENST00000623364 ATP6V0BQ99437 205 aa4□□□□□ -1.77
CDKL5-204ENST00000623364 ADI1Q9BV57 179 aa4□□□□□ -1.77
CDKL5-204ENST00000623364 TSPYL1Q9H0U9 437 aa4□□□□□ -1.77
CDKL5-204ENST00000623364 MED4Q9NPJ6 270 aa4□□□□□ -1.77
CDKL5-204ENST00000623364 IL36GQ9NZH8 169 aa4□□□□□ -1.77
CDKL5-204ENST00000623364 TIMM8BQ9Y5J9 83 aaPredicted RBP4□□□□□ -1.77
CDKL5-204ENST00000623364 V9GYY5 206 aaPredicted RBP4□□□□□ -1.77
CDKL5-204ENST00000623364 PLAC8L1A1L4L8 177 aa3.99□□□□□ -1.77
CDKL5-204ENST00000623364 CYB5BO43169 146 aa3.99□□□□□ -1.77
CDKL5-204ENST00000623364 ITM2AO43736 263 aa3.99□□□□□ -1.77
CDKL5-204ENST00000623364 DCTN3O75935 186 aa3.99□□□□□ -1.77
CDKL5-204ENST00000623364 CST1P01037 141 aa3.99□□□□□ -1.77
CDKL5-204ENST00000623364 IFNGP01579 166 aa3.99□□□□□ -1.77
CDKL5-204ENST00000623364 PRM2P04554 102 aa3.99□□□□□ -1.77
CDKL5-204ENST00000623364 H1F0P07305 194 aaKnown RBP3.99□□□□□ -1.77
CDKL5-204ENST00000623364 SELENOWP63302 87 aa3.99□□□□□ -1.77
CDKL5-204ENST00000623364 PRR3P79522 188 aaKnown RBP3.99□□□□□ -1.77
CDKL5-204ENST00000623364 SF3A3Q12874 501 aaKnown RBP eCLIP3.99□□□□□ -1.77
CDKL5-204ENST00000623364 DHRS2Q13268 280 aa3.99□□□□□ -1.77
CDKL5-204ENST00000623364 SMN1Q16637 294 aaKnown RBP3.99□□□□□ -1.77
CDKL5-204ENST00000623364 ODF4Q2M2E3 257 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms