RNA–Protein interactions for RNA: ENST00000622817.4

CBWD3-219, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,877 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-219ENST00000622817 MSGN1A6NI15 193 aa5.65□□□□□ -1.5
CBWD3-219ENST00000622817 SRRM4A7MD48 611 aaKnown RBP5.65□□□□□ -1.5
CBWD3-219ENST00000622817 B4DSR2 109 aa5.65□□□□□ -1.5
CBWD3-219ENST00000622817 TAAR5O14804 337 aa5.65□□□□□ -1.5
CBWD3-219ENST00000622817 LY86O95711 162 aa5.65□□□□□ -1.5
CBWD3-219ENST00000622817 IL6RP08887 468 aaPredicted RBP5.65□□□□□ -1.5
CBWD3-219ENST00000622817 CAV2P51636 162 aa5.65□□□□□ -1.5
CBWD3-219ENST00000622817 SPCS3P61009 180 aa5.65□□□□□ -1.5
CBWD3-219ENST00000622817 Q5PR19 223 aa5.65□□□□□ -1.5
CBWD3-219ENST00000622817 CCDC144NLQ6NUI1 221 aa5.65□□□□□ -1.5
CBWD3-219ENST00000622817 PRSS57Q6UWY2 283 aa5.65□□□□□ -1.5
CBWD3-219ENST00000622817 SLC51BQ86UW2 128 aa5.65□□□□□ -1.5
CBWD3-219ENST00000622817 ZNF429Q86V71 674 aa5.65□□□□□ -1.5
CBWD3-219ENST00000622817 OR2C3Q8N628 320 aa5.65□□□□□ -1.5
CBWD3-219ENST00000622817 OR8H1Q8NGG4 311 aa5.65□□□□□ -1.5
CBWD3-219ENST00000622817 OR4A5Q8NH83 315 aa5.65□□□□□ -1.5
CBWD3-219ENST00000622817 VSTM2AQ8TAG5 236 aa5.65□□□□□ -1.5
CBWD3-219ENST00000622817 C1orf159Q96HA4 380 aa5.65□□□□□ -1.5
CBWD3-219ENST00000622817 SMIM8Q96KF7 97 aa5.65□□□□□ -1.5
CBWD3-219ENST00000622817 CIB3Q96Q77 187 aaPredicted RBP5.65□□□□□ -1.5
CBWD3-219ENST00000622817 ARPC5LQ9BPX5 153 aa5.65□□□□□ -1.5
CBWD3-219ENST00000622817 QTRT1Q9BXR0 403 aaKnown RBP5.65□□□□□ -1.5
CBWD3-219ENST00000622817 MS4A7Q9GZW8 240 aaPredicted RBP5.65□□□□□ -1.5
CBWD3-219ENST00000622817 RBKSQ9H477 322 aa5.65□□□□□ -1.5
CBWD3-219ENST00000622817 BET1LQ9NYM9 111 aa5.65□□□□□ -1.5
CBWD3-219ENST00000622817 PRNDQ9UKY0 176 aa5.65□□□□□ -1.5
CBWD3-219ENST00000622817 FOXA2Q9Y261 457 aaPredicted RBP5.65□□□□□ -1.5
CBWD3-219ENST00000622817 TBL2Q9Y4P3 447 aaKnown RBP5.65□□□□□ -1.5
CBWD3-219ENST00000622817 WSB1Q9Y6I7 421 aa5.65□□□□□ -1.5
CBWD3-219ENST00000622817 TRAV3A0A0B4J244 114 aa5.64□□□□□ -1.51
CBWD3-219ENST00000622817 TRAV20A0A0B4J274 112 aa5.64□□□□□ -1.51
CBWD3-219ENST00000622817 A0A1W2PPI3 338 aa5.64□□□□□ -1.51
CBWD3-219ENST00000622817 A0A1W2PRD5 423 aa5.64□□□□□ -1.51
CBWD3-219ENST00000622817 A0A1W2PRF3 423 aa5.64□□□□□ -1.51
CBWD3-219ENST00000622817 A0A1W2PRM7 423 aa5.64□□□□□ -1.51
CBWD3-219ENST00000622817 C15orf61A6NNL5 157 aa5.64□□□□□ -1.51
CBWD3-219ENST00000622817 UPK2O00526 184 aa5.64□□□□□ -1.51
CBWD3-219ENST00000622817 TMEM50AO95807 157 aa5.64□□□□□ -1.51
CBWD3-219ENST00000622817 IFNA17P01571 189 aa5.64□□□□□ -1.51
CBWD3-219ENST00000622817 GATA3P23771 443 aa5.64□□□□□ -1.51
CBWD3-219ENST00000622817 CD1BP29016 333 aa5.64□□□□□ -1.51
CBWD3-219ENST00000622817 PAX9P55771 341 aa5.64□□□□□ -1.51
CBWD3-219ENST00000622817 OR2B8PP59922 312 aa5.64□□□□□ -1.51
CBWD3-219ENST00000622817 UBA52P62987 128 aaKnown RBP5.64□□□□□ -1.51
CBWD3-219ENST00000622817 LOXL1Q08397 574 aaPredicted RBP5.64□□□□□ -1.51
CBWD3-219ENST00000622817 VMA21Q3ZAQ7 101 aa5.64□□□□□ -1.51
CBWD3-219ENST00000622817 PDLIM3Q53GG5 364 aaPredicted RBP5.64□□□□□ -1.51
CBWD3-219ENST00000622817 HIST2H2BCQ6DN03 193 aa5.64□□□□□ -1.51
CBWD3-219ENST00000622817 TEX261Q6UWH6 196 aa5.64□□□□□ -1.51
CBWD3-219ENST00000622817 ZNF767PQ75MW2 155 aa5.64□□□□□ -1.51
CBWD3-219ENST00000622817 PDZD9Q8IXQ8 264 aa5.64□□□□□ -1.51
CBWD3-219ENST00000622817 PUSL1Q8N0Z8 303 aaKnown RBP5.64□□□□□ -1.51
CBWD3-219ENST00000622817 CLCC1Q96S66 551 aa5.64□□□□□ -1.51
CBWD3-219ENST00000622817 RNF5Q99942 180 aa5.64□□□□□ -1.51
CBWD3-219ENST00000622817 TMEM14BQ9NUH8 114 aa5.64□□□□□ -1.51
CBWD3-219ENST00000622817 FKBP11Q9NYL4 201 aa5.64□□□□□ -1.51
CBWD3-219ENST00000622817 PSENENQ9NZ42 101 aa5.64□□□□□ -1.51
CBWD3-219ENST00000622817 NUP50Q9UKX7 468 aa5.64□□□□□ -1.51
CBWD3-219ENST00000622817 HILPDAQ9Y5L2 63 aa5.64□□□□□ -1.51
CBWD3-219ENST00000622817 U3KQ87 197 aa5.64□□□□□ -1.51
CBWD3-219ENST00000622817 FBN2P35556 2912 aa5.64□□□□□ -1.51
CBWD3-219ENST00000622817 CELSR2Q9HCU4 2923 aa5.64□□□□□ -1.51
CBWD3-219ENST00000622817 GCN1Q92616 2671 aaKnown RBP5.64□□□□□ -1.51
CBWD3-219ENST00000622817 A0A096LNT2 108 aa5.64□□□□□ -1.51
CBWD3-219ENST00000622817 IGHV3-72A0A0B4J1Y9 119 aa5.64□□□□□ -1.51
CBWD3-219ENST00000622817 FAM24AA6NFZ4 105 aa5.64□□□□□ -1.51
CBWD3-219ENST00000622817 CEBPZOSA8MTT3 80 aa5.64□□□□□ -1.51
CBWD3-219ENST00000622817 TIMM23O14925 209 aa5.64□□□□□ -1.51
CBWD3-219ENST00000622817 KBTBD11O94819 623 aa5.64□□□□□ -1.51
CBWD3-219ENST00000622817 IFNA7P01567 189 aa5.64□□□□□ -1.51
CBWD3-219ENST00000622817 SAA1P0DJI8 122 aaPredicted RBP5.64□□□□□ -1.51
CBWD3-219ENST00000622817 IAPPP10997 89 aa5.64□□□□□ -1.51
CBWD3-219ENST00000622817 HSPE1P61604 102 aaKnown RBP5.64□□□□□ -1.51
CBWD3-219ENST00000622817 EIF5AP63241 154 aaKnown RBP5.64□□□□□ -1.51
CBWD3-219ENST00000622817 EWSR1Q01844 656 aaKnown RBP eCLIP5.64□□□□□ -1.51
CBWD3-219ENST00000622817 BAXQ07812 192 aa5.64□□□□□ -1.51
CBWD3-219ENST00000622817 LDLRAD2Q5SZI1 272 aa5.64□□□□□ -1.51
CBWD3-219ENST00000622817 LHFPL4Q7Z7J7 247 aa5.64□□□□□ -1.51
CBWD3-219ENST00000622817 STX12Q86Y82 276 aa5.64□□□□□ -1.51
CBWD3-219ENST00000622817 TMEM252Q8N6L7 170 aa5.64□□□□□ -1.51
CBWD3-219ENST00000622817 LINC01356Q8N9X3 169 aa5.64□□□□□ -1.51
CBWD3-219ENST00000622817 ZNF680Q8NEM1 530 aa5.64□□□□□ -1.51
CBWD3-219ENST00000622817 DTD1Q8TEA8 209 aa5.64□□□□□ -1.51
CBWD3-219ENST00000622817 MALSU1Q96EH3 234 aa5.64□□□□□ -1.51
CBWD3-219ENST00000622817 TSNAXQ99598 290 aaKnown RBP5.64□□□□□ -1.51
CBWD3-219ENST00000622817 ZNF471Q9BX82 626 aaPredicted RBP5.64□□□□□ -1.51
CBWD3-219ENST00000622817 REG4Q9BYZ8 158 aa5.64□□□□□ -1.51
CBWD3-219ENST00000622817 ZNF257Q9Y2Q1 563 aa5.64□□□□□ -1.51
CBWD3-219ENST00000622817 AUP1Q9Y679 476 aa5.64□□□□□ -1.51
CBWD3-219ENST00000622817 ABCA2Q9BZC7 2435 aa5.63□□□□□ -1.51
CBWD3-219ENST00000622817 APCP25054 2843 aa5.63□□□□□ -1.51
CBWD3-219ENST00000622817 IGSF23A1L1A6 192 aa5.63□□□□□ -1.51
CBWD3-219ENST00000622817 NPFFO15130 113 aa5.63□□□□□ -1.51
CBWD3-219ENST00000622817 VENTXO95231 258 aa5.63□□□□□ -1.51
CBWD3-219ENST00000622817 IGLV2-23P01705 113 aa5.63□□□□□ -1.51
CBWD3-219ENST00000622817 FGF2P09038 288 aa5.63□□□□□ -1.51
CBWD3-219ENST00000622817 SULT1A1P50225 295 aa5.63□□□□□ -1.51
CBWD3-219ENST00000622817 RPL8P62917 257 aaKnown RBP5.63□□□□□ -1.51
CBWD3-219ENST00000622817 RPP30P78346 268 aaKnown RBP5.63□□□□□ -1.51
CBWD3-219ENST00000622817 HABP2Q14520 560 aaPredicted RBP5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms