RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 OR51M1Q9H341 326 aa10.8□□□□□ -0.68
MSH6-215ENST00000622629 MPDU1O75352 247 aa10.79□□□□□ -0.68
MSH6-215ENST00000622629 AMTP48728 403 aa10.79□□□□□ -0.68
MSH6-215ENST00000622629 Q6ZRM9 215 aa10.79□□□□□ -0.68
MSH6-215ENST00000622629 GGACTQ9BVM4 153 aa10.79□□□□□ -0.68
MSH6-215ENST00000622629 COL25A1Q9BXS0 654 aaPredicted RBP10.79□□□□□ -0.68
MSH6-215ENST00000622629 TUBA4BQ9H853 241 aa10.79□□□□□ -0.68
MSH6-215ENST00000622629 JPT1Q9UK76 154 aa10.79□□□□□ -0.68
MSH6-215ENST00000622629 IGHV2OR16-5A0A0B4J2B6 119 aa10.79□□□□□ -0.68
MSH6-215ENST00000622629 IGKV1-6A0A0C4DH72 117 aa10.79□□□□□ -0.68
MSH6-215ENST00000622629 SNURFLB1AK76 121 aa10.79□□□□□ -0.68
MSH6-215ENST00000622629 HSPE1P61604 102 aaKnown RBP10.79□□□□□ -0.68
MSH6-215ENST00000622629 FAM27E3Q08E93 113 aa10.79□□□□□ -0.68
MSH6-215ENST00000622629 RPEL1Q2QD12 228 aa10.79□□□□□ -0.68
MSH6-215ENST00000622629 SPNS3Q6ZMD2 512 aa10.79□□□□□ -0.68
MSH6-215ENST00000622629 VSTM2AQ8TAG5 236 aa10.79□□□□□ -0.68
MSH6-215ENST00000622629 MEGF10Q96KG7 1140 aa10.79□□□□□ -0.68
MSH6-215ENST00000622629 CHEK1O14757 476 aa10.79□□□□□ -0.68
MSH6-215ENST00000622629 PLAUP00749 431 aa10.79□□□□□ -0.68
MSH6-215ENST00000622629 IGKV1-5P01602 117 aa10.79□□□□□ -0.68
MSH6-215ENST00000622629 C1orf185Q5T7R7 199 aa10.79□□□□□ -0.68
MSH6-215ENST00000622629 OR1B1Q8NGR6 318 aa10.79□□□□□ -0.68
MSH6-215ENST00000622629 OR1L8Q8NGR8 309 aa10.79□□□□□ -0.68
MSH6-215ENST00000622629 CRIM1Q9NZV1 1036 aa10.79□□□□□ -0.68
MSH6-215ENST00000622629 ONECUT1Q9UBC0 465 aa10.79□□□□□ -0.68
MSH6-215ENST00000622629 PIEZO1Q92508 2521 aa10.78□□□□□ -0.68
MSH6-215ENST00000622629 LOC102724200A0A096LPH7 203 aaPredicted RBP10.78□□□□□ -0.68
MSH6-215ENST00000622629 LINC00205P59089 165 aa10.78□□□□□ -0.68
MSH6-215ENST00000622629 FOXF2Q12947 444 aa10.78□□□□□ -0.68
MSH6-215ENST00000622629 WDR82Q6UXN9 313 aa10.78□□□□□ -0.68
MSH6-215ENST00000622629 OR4X1Q8NH49 305 aa10.78□□□□□ -0.68
MSH6-215ENST00000622629 PARD6AQ9NPB6 346 aa10.78□□□□□ -0.68
MSH6-215ENST00000622629 ZNF253O75346 499 aa10.78□□□□□ -0.68
MSH6-215ENST00000622629 PAX6P26367 422 aa10.78□□□□□ -0.68
MSH6-215ENST00000622629 S100A7AQ86SG5 101 aa10.78□□□□□ -0.68
MSH6-215ENST00000622629 AP1S3Q96PC3 154 aa10.78□□□□□ -0.68
MSH6-215ENST00000622629 PTPRSQ13332 1948 aa10.78□□□□□ -0.68
MSH6-215ENST00000622629 TMEM250H0YL14 139 aa10.78□□□□□ -0.68
MSH6-215ENST00000622629 GATCO43716 136 aaKnown RBP10.78□□□□□ -0.68
MSH6-215ENST00000622629 PPIAL4EA0A075B759 164 aa10.77□□□□□ -0.68
MSH6-215ENST00000622629 PPIAL4DF5H284 164 aa10.77□□□□□ -0.68
MSH6-215ENST00000622629 K7EQM0 130 aa10.77□□□□□ -0.68
MSH6-215ENST00000622629 IFNL4K9M1U5 179 aa10.77□□□□□ -0.68
MSH6-215ENST00000622629 TMEM50AO95807 157 aa10.77□□□□□ -0.68
MSH6-215ENST00000622629 PPIAL4FP0DN26 164 aa10.77□□□□□ -0.68
MSH6-215ENST00000622629 AGAP20933 346 aa10.77□□□□□ -0.68
MSH6-215ENST00000622629 PAX5Q02548 391 aa10.77□□□□□ -0.68
MSH6-215ENST00000622629 OR51G1Q8NGK1 321 aa10.77□□□□□ -0.68
MSH6-215ENST00000622629 PPIAL4AQ9Y536 164 aa10.77□□□□□ -0.68
MSH6-215ENST00000622629 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.77□□□□□ -0.684e-7■■□□□ 11.5
MSH6-215ENST00000622629 A0A1W2PN81 502 aa10.77□□□□□ -0.69
MSH6-215ENST00000622629 ZNF503-AS2A6NEH8 195 aa10.77□□□□□ -0.69
MSH6-215ENST00000622629 FAM157AC9JC47 383 aa10.77□□□□□ -0.69
MSH6-215ENST00000622629 SMIM15Q7Z3B0 74 aa10.77□□□□□ -0.69
MSH6-215ENST00000622629 ZGRF1Q86YA3 2104 aa10.77□□□□□ -0.69
MSH6-215ENST00000622629 IGLV3-1P01715 115 aa10.77□□□□□ -0.69
MSH6-215ENST00000622629 RPL30P62888 115 aaKnown RBP10.77□□□□□ -0.69
MSH6-215ENST00000622629 SRSF6Q13247 344 aaKnown RBP10.77□□□□□ -0.69
MSH6-215ENST00000622629 RNFT1Q5M7Z0 435 aa10.77□□□□□ -0.69
MSH6-215ENST00000622629 COLCA1Q6ZS62 124 aa10.77□□□□□ -0.69
MSH6-215ENST00000622629 C1orf174Q8IYL3 243 aa10.77□□□□□ -0.69
MSH6-215ENST00000622629 OR1L6Q8NGR2 347 aa10.77□□□□□ -0.69
MSH6-215ENST00000622629 VAMP8Q9BV40 100 aa10.77□□□□□ -0.69
MSH6-215ENST00000622629 SDF2L1Q9HCN8 221 aa10.77□□□□□ -0.69
MSH6-215ENST00000622629 LINC00587B1AMM8 73 aa10.77□□□□□ -0.69
MSH6-215ENST00000622629 CT45A10P0DMU9 189 aa10.77□□□□□ -0.69
MSH6-215ENST00000622629 PCSK4Q6UW60 755 aa10.77□□□□□ -0.69
MSH6-215ENST00000622629 CYP2G1PQ6ZSU1 146 aa10.77□□□□□ -0.69
MSH6-215ENST00000622629 GCSAMQ8N6F7 178 aa10.77□□□□□ -0.69
MSH6-215ENST00000622629 FAM216BQ8N7L0 139 aa10.77□□□□□ -0.69
MSH6-215ENST00000622629 C20orf202A1L168 122 aa10.76□□□□□ -0.69
MSH6-215ENST00000622629 GLRXP35754 106 aa10.76□□□□□ -0.69
MSH6-215ENST00000622629 RANP62826 216 aaKnown RBP10.76□□□□□ -0.69
MSH6-215ENST00000622629 HOXA4Q00056 320 aaPredicted RBP10.76□□□□□ -0.69
MSH6-215ENST00000622629 CFAP161Q6P656 301 aa10.76□□□□□ -0.69
MSH6-215ENST00000622629 OR1P1Q8NH06 330 aa10.76□□□□□ -0.69
MSH6-215ENST00000622629 GSN-AS1Q9NRJ2 163 aa10.76□□□□□ -0.69
MSH6-215ENST00000622629 IL19Q9UHD0 177 aa10.76□□□□□ -0.69
MSH6-215ENST00000622629 DENND4AQ7Z401 1863 aa10.76□□□□□ -0.69
MSH6-215ENST00000622629 ATP5G3P48201 142 aa10.76□□□□□ -0.69
MSH6-215ENST00000622629 LYZP61626 148 aa10.76□□□□□ -0.69
MSH6-215ENST00000622629 ACSF3Q4G176 576 aaPredicted RBP10.76□□□□□ -0.69
MSH6-215ENST00000622629 HCP5Q6MZN7 132 aa10.76□□□□□ -0.69
MSH6-215ENST00000622629 GATAD1Q8WUU5 269 aa10.76□□□□□ -0.69
MSH6-215ENST00000622629 NCBP2LA6PVI3 153 aaKnown RBP10.76□□□□□ -0.69
MSH6-215ENST00000622629 PPIHO43447 177 aaKnown RBP10.76□□□□□ -0.69
MSH6-215ENST00000622629 OR4A8P0C604 315 aa10.76□□□□□ -0.69
MSH6-215ENST00000622629 GCSAMLQ5JQS6 135 aa10.76□□□□□ -0.69
MSH6-215ENST00000622629 DTX1Q86Y01 620 aa10.76□□□□□ -0.69
MSH6-215ENST00000622629 ZCCHC24Q8N2G6 241 aaKnown RBP10.76□□□□□ -0.69
MSH6-215ENST00000622629 METRNQ9UJH8 293 aa10.76□□□□□ -0.69
MSH6-215ENST00000622629 INSIG2Q9Y5U4 225 aa10.76□□□□□ -0.69
MSH6-215ENST00000622629 SELLP14151 372 aa10.75□□□□□ -0.69
MSH6-215ENST00000622629 ELOBQ15370 118 aa10.75□□□□□ -0.69
MSH6-215ENST00000622629 OR1L4Q8NGR5 311 aa10.75□□□□□ -0.69
MSH6-215ENST00000622629 ZNF714Q96N38 554 aa10.75□□□□□ -0.69
MSH6-215ENST00000622629 SRD5A3Q9H8P0 318 aa10.75□□□□□ -0.69
MSH6-215ENST00000622629 CD3EP07766 207 aa10.75□□□□□ -0.69
MSH6-215ENST00000622629 CXCL1P09341 107 aa10.75□□□□□ -0.69
MSH6-215ENST00000622629 LINC00869P0C866 280 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms