RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 FAM122AQ96E09 287 aa8.19□□□□□ -1.1
VTA1-205ENST00000620996 TMEM208Q9BTX3 173 aa8.19□□□□□ -1.1
VTA1-205ENST00000620996 IGHV2-5P01817 119 aa8.18□□□□□ -1.1
VTA1-205ENST00000620996 SFTA3P0C7M3 94 aa8.18□□□□□ -1.1
VTA1-205ENST00000620996 RAB5AP20339 215 aa8.18□□□□□ -1.1
VTA1-205ENST00000620996 PAX6P26367 422 aa8.18□□□□□ -1.1
VTA1-205ENST00000620996 PAX5Q02548 391 aa8.18□□□□□ -1.1
VTA1-205ENST00000620996 SAPCD1Q5SSQ6 148 aa8.18□□□□□ -1.1
VTA1-205ENST00000620996 S100A7AQ86SG5 101 aa8.18□□□□□ -1.1
VTA1-205ENST00000620996 OR2G3Q8NGZ4 309 aa8.18□□□□□ -1.1
VTA1-205ENST00000620996 OR4A16Q8NH70 328 aa8.18□□□□□ -1.1
VTA1-205ENST00000620996 FAM213BQ8TBF2 198 aa8.18□□□□□ -1.1
VTA1-205ENST00000620996 ZDHHC16Q969W1 377 aa8.18□□□□□ -1.1
VTA1-205ENST00000620996 HINT2Q9BX68 163 aa8.18□□□□□ -1.1
VTA1-205ENST00000620996 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.18□□□□□ -1.1
VTA1-205ENST00000620996 ACACBO00763 2458 aa8.18□□□□□ -1.1
VTA1-205ENST00000620996 RAB29O14966 203 aa8.18□□□□□ -1.1
VTA1-205ENST00000620996 PITX3O75364 302 aa8.18□□□□□ -1.1
VTA1-205ENST00000620996 IFNA5P01569 189 aa8.18□□□□□ -1.1
VTA1-205ENST00000620996 PAX9P55771 341 aa8.18□□□□□ -1.1
VTA1-205ENST00000620996 BRWD1-AS2P59051 145 aa8.18□□□□□ -1.1
VTA1-205ENST00000620996 CTSZQ9UBR2 303 aa8.18□□□□□ -1.1
VTA1-205ENST00000620996 LAMP3Q9UQV4 416 aa8.18□□□□□ -1.1
VTA1-205ENST00000620996 LINC00312Q9Y6C7 94 aa8.18□□□□□ -1.1
VTA1-205ENST00000620996 A0A1W2PPE2 198 aa8.18□□□□□ -1.1
VTA1-205ENST00000620996 AGAP20933 346 aa8.18□□□□□ -1.1
VTA1-205ENST00000620996 EFNB3Q15768 340 aa8.18□□□□□ -1.1
VTA1-205ENST00000620996 TMEM200BQ69YZ2 307 aa8.18□□□□□ -1.1
VTA1-205ENST00000620996 CD300LFQ8TDQ1 290 aa8.18□□□□□ -1.1
VTA1-205ENST00000620996 CACNA1AO00555 2505 aa8.17□□□□□ -1.1
VTA1-205ENST00000620996 PROP1O75360 226 aa8.17□□□□□ -1.1
VTA1-205ENST00000620996 SLC25A6P12236 298 aa8.17□□□□□ -1.1
VTA1-205ENST00000620996 RAB4AP20338 218 aa8.17□□□□□ -1.1
VTA1-205ENST00000620996 ATP6V0CP27449 155 aa8.17□□□□□ -1.1
VTA1-205ENST00000620996 SULT1A1P50225 295 aa8.17□□□□□ -1.1
VTA1-205ENST00000620996 C4orf17Q53FE4 359 aa8.17□□□□□ -1.1
VTA1-205ENST00000620996 OR10X1Q8NGY0 326 aa8.17□□□□□ -1.1
VTA1-205ENST00000620996 SCGB1C1Q8TD33 95 aa8.17□□□□□ -1.1
VTA1-205ENST00000620996 QTRT1Q9BXR0 403 aaKnown RBP8.17□□□□□ -1.1
VTA1-205ENST00000620996 UBTD1Q9HAC8 227 aa8.17□□□□□ -1.1
VTA1-205ENST00000620996 FBXO7Q9Y3I1 522 aa8.17□□□□□ -1.1
VTA1-205ENST00000620996 URGCP-MRPS24S4R325 110 aa8.17□□□□□ -1.1
VTA1-205ENST00000620996 KIAA1324LA8MWY0 1029 aaPredicted RBP8.17□□□□□ -1.1
VTA1-205ENST00000620996 TSPAN15O95858 294 aa8.17□□□□□ -1.1
VTA1-205ENST00000620996 MT-ND4LP03901 98 aa8.17□□□□□ -1.1
VTA1-205ENST00000620996 FAM157CP0CG43 387 aa8.17□□□□□ -1.1
VTA1-205ENST00000620996 SULT1A2P50226 295 aa8.17□□□□□ -1.1
VTA1-205ENST00000620996 DLX1P56177 255 aa8.17□□□□□ -1.1
VTA1-205ENST00000620996 BAXQ07812 192 aa8.17□□□□□ -1.1
VTA1-205ENST00000620996 EIF4EBP1Q13541 118 aaPredicted RBP8.17□□□□□ -1.1
VTA1-205ENST00000620996 C1orf229Q6ZS94 237 aaPredicted RBP8.17□□□□□ -1.1
VTA1-205ENST00000620996 ELOVL1Q9BW60 279 aa8.17□□□□□ -1.1
VTA1-205ENST00000620996 CBLN4Q9NTU7 201 aa8.17□□□□□ -1.1
VTA1-205ENST00000620996 HIVEP3Q5T1R4 2406 aa8.17□□□□□ -1.1
VTA1-205ENST00000620996 FGF16O43320 207 aa8.16□□□□□ -1.1
VTA1-205ENST00000620996 HPRT1P00492 218 aa8.16□□□□□ -1.1
VTA1-205ENST00000620996 OR9G9P0C7N8 305 aa8.16□□□□□ -1.1
VTA1-205ENST00000620996 CGB3P0DN86 165 aa8.16□□□□□ -1.1
VTA1-205ENST00000620996 CGB7P0DN87 165 aa8.16□□□□□ -1.1
VTA1-205ENST00000620996 MMP9P14780 707 aa8.16□□□□□ -1.1
VTA1-205ENST00000620996 CR1LQ2VPA4 569 aa8.16□□□□□ -1.1
VTA1-205ENST00000620996 OR4S2Q8NH73 311 aa8.16□□□□□ -1.1
VTA1-205ENST00000620996 SVIPQ8NHG7 77 aa8.16□□□□□ -1.1
VTA1-205ENST00000620996 ATP5SQ99766 215 aa8.16□□□□□ -1.1
VTA1-205ENST00000620996 RAB1BQ9H0U4 201 aa8.16□□□□□ -1.1
VTA1-205ENST00000620996 C11orf1Q9H5F2 150 aa8.16□□□□□ -1.1
VTA1-205ENST00000620996 PLA2G2EQ9NZK7 142 aa8.16□□□□□ -1.1
VTA1-205ENST00000620996 RPUSD1Q9UJJ7 312 aaKnown RBP8.16□□□□□ -1.1
VTA1-205ENST00000620996 WSB1Q9Y6I7 421 aa8.16□□□□□ -1.1
VTA1-205ENST00000620996 ARFGEF3Q5TH69 2177 aa8.16□□□□□ -1.1
VTA1-205ENST00000620996 UBE2L5PA0A1B0GUS4 154 aa8.16□□□□□ -1.1
VTA1-205ENST00000620996 OPN1MWP04001 364 aa8.16□□□□□ -1.1
VTA1-205ENST00000620996 OPN1MW2P0DN77 364 aa8.16□□□□□ -1.1
VTA1-205ENST00000620996 OPN1MW3P0DN78 364 aa8.16□□□□□ -1.1
VTA1-205ENST00000620996 ZNF674Q2M3X9 581 aa8.16□□□□□ -1.1
VTA1-205ENST00000620996 C15orf54Q8N8G6 183 aa8.16□□□□□ -1.1
VTA1-205ENST00000620996 GINS3Q9BRX5 216 aa8.16□□□□□ -1.1
VTA1-205ENST00000620996 DOK5Q9P104 306 aa8.16□□□□□ -1.1
VTA1-205ENST00000620996 CACNA1BQ00975 2339 aa8.16□□□□□ -1.1
VTA1-205ENST00000620996 SPTAN1Q13813 2472 aaKnown RBP8.16□□□□□ -1.1
VTA1-205ENST00000620996 DLEU1O43261 78 aa8.16□□□□□ -1.1
VTA1-205ENST00000620996 WNT2P09544 360 aa8.16□□□□□ -1.1
VTA1-205ENST00000620996 HBG1P69891 147 aa8.16□□□□□ -1.1
VTA1-205ENST00000620996 HBG2P69892 147 aa8.16□□□□□ -1.1
VTA1-205ENST00000620996 MIDNQ504T8 468 aa8.16□□□□□ -1.1
VTA1-205ENST00000620996 FCN3O75636 299 aa8.15□□□□□ -1.1
VTA1-205ENST00000620996 DFFBO76075 338 aa8.15□□□□□ -1.1
VTA1-205ENST00000620996 SOD3P08294 240 aa8.15□□□□□ -1.1
VTA1-205ENST00000620996 CDKN1AP38936 164 aa8.15□□□□□ -1.1
VTA1-205ENST00000620996 CEBPGP53567 150 aa8.15□□□□□ -1.1
VTA1-205ENST00000620996 MEF2CQ06413 473 aaPredicted RBP8.15□□□□□ -1.1
VTA1-205ENST00000620996 AWAT1Q58HT5 328 aa8.15□□□□□ -1.1
VTA1-205ENST00000620996 AKR1C8PQ5T2L2 129 aa8.15□□□□□ -1.1
VTA1-205ENST00000620996 ODF3L1Q8IXM7 274 aa8.15□□□□□ -1.1
VTA1-205ENST00000620996 ZNF295-AS1Q8N0V1 137 aa8.15□□□□□ -1.1
VTA1-205ENST00000620996 TCTEX1D1Q8N7M0 179 aa8.15□□□□□ -1.1
VTA1-205ENST00000620996 RNASE8Q8TDE3 154 aaKnown RBP8.15□□□□□ -1.1
VTA1-205ENST00000620996 SNHG12Q9BXW3 62 aa8.15□□□□□ -1.1
VTA1-205ENST00000620996 MMP26Q9NRE1 261 aa8.15□□□□□ -1.1
VTA1-205ENST00000620996 TMEM140Q9NV12 185 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms