RNA–Protein interactions for RNA: ENST00000619035.4

TNFAIP3-209, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-209ENST00000619035 LIPFP07098 398 aa10.34□□□□□ -0.75
TNFAIP3-209ENST00000619035 SFTA3P0C7M3 94 aa10.34□□□□□ -0.75
TNFAIP3-209ENST00000619035 SNCAP37840 140 aa10.34□□□□□ -0.75
TNFAIP3-209ENST00000619035 FAM71F2Q6NXP2 309 aa10.34□□□□□ -0.75
TNFAIP3-209ENST00000619035 RHOVQ96L33 236 aa10.34□□□□□ -0.75
TNFAIP3-209ENST00000619035 CCL19Q99731 98 aa10.34□□□□□ -0.75
TNFAIP3-209ENST00000619035 NKX6-2Q9C056 277 aaPredicted RBP10.34□□□□□ -0.75
TNFAIP3-209ENST00000619035 LOC105371242A0A075B767 164 aa10.33□□□□□ -0.76
TNFAIP3-209ENST00000619035 TRAV3A0A0B4J244 114 aa10.33□□□□□ -0.76
TNFAIP3-209ENST00000619035 NUDT19A8MXV4 375 aa10.33□□□□□ -0.76
TNFAIP3-209ENST00000619035 EIF3GO75821 320 aaKnown RBP eCLIP10.33□□□□□ -0.76
TNFAIP3-209ENST00000619035 APOA2P02652 100 aa10.33□□□□□ -0.76
TNFAIP3-209ENST00000619035 CD5P06127 495 aa10.33□□□□□ -0.76
TNFAIP3-209ENST00000619035 ARF6P62330 175 aa10.33□□□□□ -0.76
TNFAIP3-209ENST00000619035 TMEM88Q6PEY1 159 aa10.33□□□□□ -0.76
TNFAIP3-209ENST00000619035 OR13D1Q8NGV5 346 aa10.33□□□□□ -0.76
TNFAIP3-209ENST00000619035 DTD1Q8TEA8 209 aa10.33□□□□□ -0.76
TNFAIP3-209ENST00000619035 TNFRSF14Q92956 283 aa10.33□□□□□ -0.76
TNFAIP3-209ENST00000619035 OR4C12Q96R67 309 aa10.33□□□□□ -0.76
TNFAIP3-209ENST00000619035 UTP20O75691 2785 aaKnown RBP10.33□□□□□ -0.76
TNFAIP3-209ENST00000619035 PPT1P50897 306 aa10.33□□□□□ -0.76
TNFAIP3-209ENST00000619035 OR4A47Q6IF82 309 aa10.33□□□□□ -0.76
TNFAIP3-209ENST00000619035 LILRB2Q8N423 598 aa10.33□□□□□ -0.76
TNFAIP3-209ENST00000619035 TMEM186Q96B77 213 aa10.33□□□□□ -0.76
TNFAIP3-209ENST00000619035 SCRT1Q9BWW7 348 aa10.33□□□□□ -0.76
TNFAIP3-209ENST00000619035 EIF5A2Q9GZV4 153 aaKnown RBP10.33□□□□□ -0.76
TNFAIP3-209ENST00000619035 SIRT7Q9NRC8 400 aa10.33□□□□□ -0.76
TNFAIP3-209ENST00000619035 FAM157AC9JC47 383 aa10.32□□□□□ -0.76
TNFAIP3-209ENST00000619035 DNASE2O00115 360 aaPredicted RBP10.32□□□□□ -0.76
TNFAIP3-209ENST00000619035 IGHV4-39P01824 125 aa10.32□□□□□ -0.76
TNFAIP3-209ENST00000619035 NPBWR1P48145 328 aa10.32□□□□□ -0.76
TNFAIP3-209ENST00000619035 GUK1Q16774 197 aa10.32□□□□□ -0.76
TNFAIP3-209ENST00000619035 TGIF2LXQ8IUE1 241 aa10.32□□□□□ -0.76
TNFAIP3-209ENST00000619035 LY6G5BQ8NDX9 201 aa10.32□□□□□ -0.76
TNFAIP3-209ENST00000619035 CLEC7AQ9BXN2 247 aa10.32□□□□□ -0.76
TNFAIP3-209ENST00000619035 BPESC1Q9GZL8 116 aa10.32□□□□□ -0.76
TNFAIP3-209ENST00000619035 VSIRQ9H7M9 311 aa10.32□□□□□ -0.76
TNFAIP3-209ENST00000619035 STRAPQ9Y3F4 350 aaKnown RBP10.32□□□□□ -0.76
TNFAIP3-209ENST00000619035 FAM90A9PA6NNJ1 464 aa10.32□□□□□ -0.76
TNFAIP3-209ENST00000619035 H0YJW9 148 aa10.32□□□□□ -0.76
TNFAIP3-209ENST00000619035 HRASP01112 189 aa10.32□□□□□ -0.76
TNFAIP3-209ENST00000619035 IFNA5P01569 189 aa10.32□□□□□ -0.76
TNFAIP3-209ENST00000619035 IL3RAP26951 378 aa10.32□□□□□ -0.76
TNFAIP3-209ENST00000619035 DVL1P1P54792 670 aaPredicted RBP10.32□□□□□ -0.76
TNFAIP3-209ENST00000619035 TAS2R30P59541 319 aa10.32□□□□□ -0.76
TNFAIP3-209ENST00000619035 RELBQ01201 579 aa10.32□□□□□ -0.76
TNFAIP3-209ENST00000619035 SRSF1Q07955 248 aaKnown RBP eCLIP10.32□□□□□ -0.76
TNFAIP3-209ENST00000619035 C10orf91Q5T1B1 145 aa10.32□□□□□ -0.76
TNFAIP3-209ENST00000619035 RARRES2Q99969 163 aa10.32□□□□□ -0.76
TNFAIP3-209ENST00000619035 UBE2L5PA0A1B0GUS4 154 aa10.31□□□□□ -0.76
TNFAIP3-209ENST00000619035 RAB5CP51148 216 aa10.31□□□□□ -0.76
TNFAIP3-209ENST00000619035 PRRX1P54821 245 aa10.31□□□□□ -0.76
TNFAIP3-209ENST00000619035 HLA-DRB5Q30154 266 aa10.31□□□□□ -0.76
TNFAIP3-209ENST00000619035 SPSB3Q6PJ21 355 aa10.31□□□□□ -0.76
TNFAIP3-209ENST00000619035 SVBPQ8N300 66 aa10.31□□□□□ -0.76
TNFAIP3-209ENST00000619035 PNKDQ8N490 385 aa10.31□□□□□ -0.76
TNFAIP3-209ENST00000619035 ST6GALNAC6Q969X2 333 aa10.31□□□□□ -0.76
TNFAIP3-209ENST00000619035 HARBI1Q96MB7 349 aa10.31□□□□□ -0.76
TNFAIP3-209ENST00000619035 NABP2Q9BQ15 211 aa10.31□□□□□ -0.76
TNFAIP3-209ENST00000619035 ARHGAP32A7KAX9 2087 aa10.31□□□□□ -0.76
TNFAIP3-209ENST00000619035 IGHV3-72A0A0B4J1Y9 119 aa10.31□□□□□ -0.76
TNFAIP3-209ENST00000619035 DFFBO76075 338 aa10.31□□□□□ -0.76
TNFAIP3-209ENST00000619035 ZNF137PP52743 207 aa10.31□□□□□ -0.76
TNFAIP3-209ENST00000619035 LCN2P80188 198 aa10.31□□□□□ -0.76
TNFAIP3-209ENST00000619035 SLC38A11Q08AI6 406 aa10.31□□□□□ -0.76
TNFAIP3-209ENST00000619035 AKIRIN2Q53H80 203 aa10.31□□□□□ -0.76
TNFAIP3-209ENST00000619035 AKR1C8PQ5T2L2 129 aa10.31□□□□□ -0.76
TNFAIP3-209ENST00000619035 DHRS7BQ6IAN0 325 aaPredicted RBP10.31□□□□□ -0.76
TNFAIP3-209ENST00000619035 TMEM14EPQ6UXP3 125 aa10.31□□□□□ -0.76
TNFAIP3-209ENST00000619035 OR5AN1Q8NGI8 311 aa10.31□□□□□ -0.76
TNFAIP3-209ENST00000619035 GNPNAT1Q96EK6 184 aaPredicted RBP10.31□□□□□ -0.76
TNFAIP3-209ENST00000619035 SEC11CQ9BY50 192 aa10.31□□□□□ -0.76
TNFAIP3-209ENST00000619035 CARHSP1Q9Y2V2 147 aaKnown RBP10.31□□□□□ -0.76
TNFAIP3-209ENST00000619035 UBR5O95071 2799 aaPredicted RBP10.31□□□□□ -0.76
TNFAIP3-209ENST00000619035 SRRM4A7MD48 611 aaKnown RBP10.3□□□□□ -0.76
TNFAIP3-209ENST00000619035 TRIM77I1YAP6 450 aa10.3□□□□□ -0.76
TNFAIP3-209ENST00000619035 IGHV2-5P01817 119 aa10.3□□□□□ -0.76
TNFAIP3-209ENST00000619035 COX6B1P14854 86 aa10.3□□□□□ -0.76
TNFAIP3-209ENST00000619035 ZFP36P26651 326 aaKnown RBP10.3□□□□□ -0.76
TNFAIP3-209ENST00000619035 ETV3LQ6ZN32 361 aa10.3□□□□□ -0.76
TNFAIP3-209ENST00000619035 CBLN2Q8IUK8 224 aa10.3□□□□□ -0.76
TNFAIP3-209ENST00000619035 Q8N7P7 452 aa10.3□□□□□ -0.76
TNFAIP3-209ENST00000619035 SCGB1C1Q8TD33 95 aa10.3□□□□□ -0.76
TNFAIP3-209ENST00000619035 SFT2D1Q8WV19 159 aa10.3□□□□□ -0.76
TNFAIP3-209ENST00000619035 FLYWCH2Q96CP2 140 aaKnown RBP10.3□□□□□ -0.76
TNFAIP3-209ENST00000619035 CIB3Q96Q77 187 aaPredicted RBP10.3□□□□□ -0.76
TNFAIP3-209ENST00000619035 AIFM2Q9BRQ8 373 aa10.3□□□□□ -0.76
TNFAIP3-209ENST00000619035 ASH1LQ9NR48 2969 aaKnown RBP10.3□□□□□ -0.76
TNFAIP3-209ENST00000619035 TET2Q6N021 2002 aaPredicted RBP10.3□□□□□ -0.76
TNFAIP3-209ENST00000619035 C15orf61A6NNL5 157 aa10.3□□□□□ -0.76
TNFAIP3-209ENST00000619035 ENSAO43768 121 aaKnown RBP10.3□□□□□ -0.76
TNFAIP3-209ENST00000619035 IGLV1-47P01700 117 aa10.3□□□□□ -0.76
TNFAIP3-209ENST00000619035 SAA1P0DJI8 122 aaPredicted RBP10.3□□□□□ -0.76
TNFAIP3-209ENST00000619035 MYOD1P15172 320 aa10.3□□□□□ -0.76
TNFAIP3-209ENST00000619035 HOXA1P49639 335 aaPredicted RBP10.3□□□□□ -0.76
TNFAIP3-209ENST00000619035 HBG1P69891 147 aa10.3□□□□□ -0.76
TNFAIP3-209ENST00000619035 HBG2P69892 147 aa10.3□□□□□ -0.76
TNFAIP3-209ENST00000619035 C1orf122Q6ZSJ8 110 aa10.3□□□□□ -0.76
TNFAIP3-209ENST00000619035 LHX4Q969G2 390 aa10.3□□□□□ -0.76
TNFAIP3-209ENST00000619035 UMAD1C9J7I0 102 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms