RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 CYB5BO43169 146 aa3.29□□□□□ -1.88
SNCA-213ENST00000618500 SLC22A5O76082 557 aa3.29□□□□□ -1.88
SNCA-213ENST00000618500 CDRT1O95170 752 aa3.29□□□□□ -1.88
SNCA-213ENST00000618500 OR2C1O95371 312 aa3.29□□□□□ -1.88
SNCA-213ENST00000618500 NPY1RP25929 384 aa3.29□□□□□ -1.88
SNCA-213ENST00000618500 HLA-DMBP28068 263 aa3.29□□□□□ -1.88
SNCA-213ENST00000618500 RPS27AP62979 156 aaKnown RBP3.29□□□□□ -1.88
SNCA-213ENST00000618500 MS4A2Q01362 244 aa3.29□□□□□ -1.88
SNCA-213ENST00000618500 PPP1R8Q12972 351 aaKnown RBP3.29□□□□□ -1.88
SNCA-213ENST00000618500 P2RY14Q15391 338 aa3.29□□□□□ -1.88
SNCA-213ENST00000618500 C1orf100Q5SVJ3 147 aa3.29□□□□□ -1.88
SNCA-213ENST00000618500 ZNF66Q6ZN08 573 aa3.29□□□□□ -1.88
SNCA-213ENST00000618500 LYPD1Q8N2G4 141 aa3.29□□□□□ -1.88
SNCA-213ENST00000618500 C6orf223Q8N319 242 aa3.29□□□□□ -1.88
SNCA-213ENST00000618500 CSNK1G2-AS1Q8NCQ2 148 aa3.29□□□□□ -1.88
SNCA-213ENST00000618500 GIMAP1Q8WWP7 306 aa3.29□□□□□ -1.88
SNCA-213ENST00000618500 CACNG8Q8WXS5 425 aa3.29□□□□□ -1.88
SNCA-213ENST00000618500 DGCR14Q96DF8 476 aaKnown RBP3.29□□□□□ -1.88
SNCA-213ENST00000618500 SMIM19Q96E16 107 aa3.29□□□□□ -1.88
SNCA-213ENST00000618500 CLCC1Q96S66 551 aa3.29□□□□□ -1.88
SNCA-213ENST00000618500 TBX5Q99593 518 aa3.29□□□□□ -1.88
SNCA-213ENST00000618500 SLC29A1Q99808 456 aa3.29□□□□□ -1.88
SNCA-213ENST00000618500 ERVK13-1Q9NX77 482 aa3.29□□□□□ -1.88
SNCA-213ENST00000618500 CKLFQ9UBR5 152 aa3.29□□□□□ -1.88
SNCA-213ENST00000618500 TGOLN2O43493 480 aa3.28□□□□□ -1.88
SNCA-213ENST00000618500 XRCC3O43542 346 aa3.28□□□□□ -1.88
SNCA-213ENST00000618500 SCAF4O95104 1147 aaKnown RBP3.28□□□□□ -1.88
SNCA-213ENST00000618500 HLA-AP01891 365 aaKnown RBP3.28□□□□□ -1.88
SNCA-213ENST00000618500 IL6RP08887 468 aaPredicted RBP3.28□□□□□ -1.88
SNCA-213ENST00000618500 GABRB1P18505 474 aa3.28□□□□□ -1.88
SNCA-213ENST00000618500 LINC00205P59089 165 aa3.28□□□□□ -1.88
SNCA-213ENST00000618500 EIF4EBP1Q13541 118 aaPredicted RBP3.28□□□□□ -1.88
SNCA-213ENST00000618500 C12orf74Q32Q52 190 aa3.28□□□□□ -1.88
SNCA-213ENST00000618500 LPCAT4Q643R3 524 aa3.28□□□□□ -1.88
SNCA-213ENST00000618500 GLDNQ6ZMI3 551 aaPredicted RBP3.28□□□□□ -1.88
SNCA-213ENST00000618500 CENPSQ8N2Z9 138 aa3.28□□□□□ -1.88
SNCA-213ENST00000618500 FAM89BQ8N5H3 189 aa3.28□□□□□ -1.88
SNCA-213ENST00000618500 ZNF645Q8N7E2 425 aa3.28□□□□□ -1.88
SNCA-213ENST00000618500 LGALS12Q96DT0 336 aa3.28□□□□□ -1.88
SNCA-213ENST00000618500 ZNF414Q96IQ9 312 aa3.28□□□□□ -1.88
SNCA-213ENST00000618500 TXN2Q99757 166 aa3.28□□□□□ -1.88
SNCA-213ENST00000618500 AIFM2Q9BRQ8 373 aa3.28□□□□□ -1.88
SNCA-213ENST00000618500 KRTAP4-2Q9BYR5 136 aa3.28□□□□□ -1.88
SNCA-213ENST00000618500 PUS1Q9Y606 427 aaKnown RBP eCLIP3.28□□□□□ -1.88
SNCA-213ENST00000618500 NACAE9PAV3 2078 aa3.28□□□□□ -1.88
SNCA-213ENST00000618500 DEFB131BA0A096LNP1 70 aa3.28□□□□□ -1.88
SNCA-213ENST00000618500 KBTBD11O94819 623 aa3.28□□□□□ -1.88
SNCA-213ENST00000618500 GIG44P09565 113 aaPredicted RBP3.28□□□□□ -1.88
SNCA-213ENST00000618500 FCGR1AP12314 374 aa3.28□□□□□ -1.88
SNCA-213ENST00000618500 QRFPP83859 136 aa3.28□□□□□ -1.88
SNCA-213ENST00000618500 POU2AF1Q16633 256 aa3.28□□□□□ -1.88
SNCA-213ENST00000618500 GLIPR1L1Q6UWM5 242 aa3.28□□□□□ -1.88
SNCA-213ENST00000618500 Q6ZTC4 211 aa3.28□□□□□ -1.88
SNCA-213ENST00000618500 ZNF184Q99676 751 aaPredicted RBP3.28□□□□□ -1.88
SNCA-213ENST00000618500 THTPAQ9BU02 230 aa3.28□□□□□ -1.88
SNCA-213ENST00000618500 ZNF430Q9H8G1 570 aaPredicted RBP3.28□□□□□ -1.88
SNCA-213ENST00000618500 SMPXQ9UHP9 88 aa3.28□□□□□ -1.88
SNCA-213ENST00000618500 TRBV6-7A0A0A0MS04 114 aa3.27□□□□□ -1.89
SNCA-213ENST00000618500 SRRM4A7MD48 611 aaKnown RBP3.27□□□□□ -1.89
SNCA-213ENST00000618500 TRDCB7Z8K6 153 aa3.27□□□□□ -1.89
SNCA-213ENST00000618500 J3QLW9 94 aa3.27□□□□□ -1.89
SNCA-213ENST00000618500 CTSDP07339 412 aaPredicted RBP3.27□□□□□ -1.89
SNCA-213ENST00000618500 ZNF19P17023 458 aa3.27□□□□□ -1.89
SNCA-213ENST00000618500 PJVKQ0ZLH3 352 aa3.27□□□□□ -1.89
SNCA-213ENST00000618500 TNXAQ16473 311 aa3.27□□□□□ -1.89
SNCA-213ENST00000618500 Q499Y3 187 aa3.27□□□□□ -1.89
SNCA-213ENST00000618500 KRTAP5-3Q6L8H2 238 aa3.27□□□□□ -1.89
SNCA-213ENST00000618500 HS3ST5Q8IZT8 346 aa3.27□□□□□ -1.89
SNCA-213ENST00000618500 CANT1Q8WVQ1 401 aa3.27□□□□□ -1.89
SNCA-213ENST00000618500 NSL1Q96IY1 281 aa3.27□□□□□ -1.89
SNCA-213ENST00000618500 OR51E2Q9H255 320 aa3.27□□□□□ -1.89
SNCA-213ENST00000618500 VSIRQ9H7M9 311 aa3.27□□□□□ -1.89
SNCA-213ENST00000618500 SDHAF2Q9NX18 166 aa3.27□□□□□ -1.89
SNCA-213ENST00000618500 BET1LQ9NYM9 111 aa3.27□□□□□ -1.89
SNCA-213ENST00000618500 THYN1Q9P016 225 aa3.27□□□□□ -1.89
SNCA-213ENST00000618500 U3KQE9 123 aa3.27□□□□□ -1.89
SNCA-213ENST00000618500 IGHV7-4-1A0A0J9YVY3 117 aa3.27□□□□□ -1.89
SNCA-213ENST00000618500 TMEM14DPA8MWL7 114 aa3.27□□□□□ -1.89
SNCA-213ENST00000618500 OR2J3O76001 311 aa3.27□□□□□ -1.89
SNCA-213ENST00000618500 CA1P00915 261 aaPredicted RBP3.27□□□□□ -1.89
SNCA-213ENST00000618500 IFNA10P01566 189 aa3.27□□□□□ -1.89
SNCA-213ENST00000618500 IFNA21P01568 189 aa3.27□□□□□ -1.89
SNCA-213ENST00000618500 IFNA17P01571 189 aa3.27□□□□□ -1.89
SNCA-213ENST00000618500 FGF9P31371 208 aaPredicted RBP3.27□□□□□ -1.89
SNCA-213ENST00000618500 DUTP33316 252 aaKnown RBP3.27□□□□□ -1.89
SNCA-213ENST00000618500 CEACAM6P40199 344 aa3.27□□□□□ -1.89
SNCA-213ENST00000618500 SLC22A6Q4U2R8 563 aa3.27□□□□□ -1.89
SNCA-213ENST00000618500 UNQ9165/PRO28630Q6UXU0 137 aa3.27□□□□□ -1.89
SNCA-213ENST00000618500 C5orf30Q96GV9 206 aa3.27□□□□□ -1.89
SNCA-213ENST00000618500 Q96MT0 163 aa3.27□□□□□ -1.89
SNCA-213ENST00000618500 C18orf15Q96N68 181 aa3.27□□□□□ -1.89
SNCA-213ENST00000618500 NEDD4LQ96PU5 975 aa3.27□□□□□ -1.89
SNCA-213ENST00000618500 SELENOIQ9C0D9 397 aa3.27□□□□□ -1.89
SNCA-213ENST00000618500 TMEM14BQ9NUH8 114 aa3.27□□□□□ -1.89
SNCA-213ENST00000618500 NBDYA0A0U1RRE5 68 aa3.27□□□□□ -1.89
SNCA-213ENST00000618500 G3V2T6 193 aa3.27□□□□□ -1.89
SNCA-213ENST00000618500 M0R1X1 148 aa3.27□□□□□ -1.89
SNCA-213ENST00000618500 CHEK1O14757 476 aa3.27□□□□□ -1.89
SNCA-213ENST00000618500 MPPED1O15442 326 aa3.27□□□□□ -1.89
SNCA-213ENST00000618500 SAA1P0DJI8 122 aaPredicted RBP3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms