RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 SSTR5P35346 364 aa8.17□□□□□ -1.1
TNFRSF9-204ENST00000615230 CYP2G1PQ6ZSU1 146 aa8.17□□□□□ -1.1
TNFRSF9-204ENST00000615230 NECAP1Q8NC96 275 aa8.17□□□□□ -1.1
TNFRSF9-204ENST00000615230 GPR146Q96CH1 333 aa8.17□□□□□ -1.1
TNFRSF9-204ENST00000615230 OR51M1Q9H341 326 aa8.17□□□□□ -1.1
TNFRSF9-204ENST00000615230 TET1Q8NFU7 2136 aa8.17□□□□□ -1.1
TNFRSF9-204ENST00000615230 RPL13AP40429 203 aaKnown RBP8.17□□□□□ -1.1
TNFRSF9-204ENST00000615230 TPTE2P1Q5T6R2 138 aa8.17□□□□□ -1.1
TNFRSF9-204ENST00000615230 OR4B1Q8NGF8 309 aa8.17□□□□□ -1.1
TNFRSF9-204ENST00000615230 IFI27L2Q9H2X8 130 aa8.17□□□□□ -1.1
TNFRSF9-204ENST00000615230 NPBWR2P48146 333 aa8.17□□□□□ -1.1
TNFRSF9-204ENST00000615230 KIAA0141Q14154 515 aaPredicted RBP8.17□□□□□ -1.1
TNFRSF9-204ENST00000615230 MYOZ3Q8TDC0 251 aa8.17□□□□□ -1.1
TNFRSF9-204ENST00000615230 GATAD1Q8WUU5 269 aa8.17□□□□□ -1.1
TNFRSF9-204ENST00000615230 SRSF8Q9BRL6 282 aaKnown RBP8.17□□□□□ -1.1
TNFRSF9-204ENST00000615230 MRPL20Q9BYC9 149 aaKnown RBP8.17□□□□□ -1.1
TNFRSF9-204ENST00000615230 PLXNA4Q9HCM2 1894 aa8.17□□□□□ -1.1
TNFRSF9-204ENST00000615230 TRAV41A0A0B4J266 112 aa8.17□□□□□ -1.1
TNFRSF9-204ENST00000615230 FAM74A7A6NL05 159 aa8.17□□□□□ -1.1
TNFRSF9-204ENST00000615230 SRRM5B3KS81 715 aa8.17□□□□□ -1.1
TNFRSF9-204ENST00000615230 TBX6O95947 436 aaPredicted RBP8.17□□□□□ -1.1
TNFRSF9-204ENST00000615230 NSUN5P1Q3KNT7 163 aa8.17□□□□□ -1.1
TNFRSF9-204ENST00000615230 NHLRC3Q5JS37 347 aa8.17□□□□□ -1.1
TNFRSF9-204ENST00000615230 FAM159AQ6UWV7 190 aa8.17□□□□□ -1.1
TNFRSF9-204ENST00000615230 FOXL2NBQ6ZUU3 175 aa8.17□□□□□ -1.1
TNFRSF9-204ENST00000615230 KIR3DL3Q8N743 410 aa8.17□□□□□ -1.1
TNFRSF9-204ENST00000615230 PLSCR3Q9NRY6 295 aa8.17□□□□□ -1.1
TNFRSF9-204ENST00000615230 HSBP1O75506 76 aa8.17□□□□□ -1.1
TNFRSF9-204ENST00000615230 OR9G9P0C7N8 305 aa8.17□□□□□ -1.1
TNFRSF9-204ENST00000615230 CX3CL1P78423 397 aa8.17□□□□□ -1.1
TNFRSF9-204ENST00000615230 PAPPA-AS1Q5QFB9 102 aa8.17□□□□□ -1.1
TNFRSF9-204ENST00000615230 CLDND2Q8NHS1 167 aa8.17□□□□□ -1.1
TNFRSF9-204ENST00000615230 Q96MF0 132 aa8.17□□□□□ -1.1
TNFRSF9-204ENST00000615230 FBXL15Q9H469 300 aa8.17□□□□□ -1.1
TNFRSF9-204ENST00000615230 NAT8BQ9UHF3 227 aa8.17□□□□□ -1.1
TNFRSF9-204ENST00000615230 DOCK6Q96HP0 2047 aa8.17□□□□□ -1.1
TNFRSF9-204ENST00000615230 SPSB3Q6PJ21 355 aa8.16□□□□□ -1.1
TNFRSF9-204ENST00000615230 LHFPL5Q8TAF8 219 aa8.16□□□□□ -1.1
TNFRSF9-204ENST00000615230 Q8TCH9 128 aa8.16□□□□□ -1.1
TNFRSF9-204ENST00000615230 SPSB4Q96A44 273 aa8.16□□□□□ -1.1
TNFRSF9-204ENST00000615230 VWA8A3KMH1 1905 aa8.16□□□□□ -1.1
TNFRSF9-204ENST00000615230 IGHV3-21A0A0B4J1V1 117 aa8.16□□□□□ -1.1
TNFRSF9-204ENST00000615230 RPS11P62280 158 aaKnown RBP eCLIP8.16□□□□□ -1.1
TNFRSF9-204ENST00000615230 A8MWL6 223 aa8.16□□□□□ -1.1
TNFRSF9-204ENST00000615230 RRHO14718 337 aa8.16□□□□□ -1.1
TNFRSF9-204ENST00000615230 TCF21O43680 179 aa8.16□□□□□ -1.1
TNFRSF9-204ENST00000615230 HKR1P10072 659 aa8.16□□□□□ -1.1
TNFRSF9-204ENST00000615230 CLLU1Q5K131 121 aa8.16□□□□□ -1.1
TNFRSF9-204ENST00000615230 PRO3102Q9H379 93 aa8.16□□□□□ -1.1
TNFRSF9-204ENST00000615230 GGCTO75223 188 aaKnown RBP8.16□□□□□ -1.1
TNFRSF9-204ENST00000615230 CADM3Q8N126 398 aa8.16□□□□□ -1.1
TNFRSF9-204ENST00000615230 TMEM167AQ8TBQ9 72 aa8.16□□□□□ -1.1
TNFRSF9-204ENST00000615230 IGHV2-26A0A0B4J1V2 119 aa8.16□□□□□ -1.1
TNFRSF9-204ENST00000615230 SULT1A2P50226 295 aa8.16□□□□□ -1.1
TNFRSF9-204ENST00000615230 OR5AU1Q8NGC0 362 aa8.16□□□□□ -1.1
TNFRSF9-204ENST00000615230 MIXL1Q9H2W2 232 aa8.16□□□□□ -1.1
TNFRSF9-204ENST00000615230 PHLDA3Q9Y5J5 127 aa8.16□□□□□ -1.1
TNFRSF9-204ENST00000615230 A0A1W2PPQ1 181 aa8.15□□□□□ -1.1
TNFRSF9-204ENST00000615230 UPK2O00526 184 aa8.15□□□□□ -1.1
TNFRSF9-204ENST00000615230 LYPD3O95274 346 aa8.15□□□□□ -1.1
TNFRSF9-204ENST00000615230 WNT5AP41221 380 aa8.15□□□□□ -1.1
TNFRSF9-204ENST00000615230 PLAC9Q5JTB6 97 aa8.15□□□□□ -1.1
TNFRSF9-204ENST00000615230 LDLRAD2Q5SZI1 272 aa8.15□□□□□ -1.1
TNFRSF9-204ENST00000615230 ZNF600Q6ZNG1 722 aa8.15□□□□□ -1.1
TNFRSF9-204ENST00000615230 TMEM101Q96IK0 257 aa8.15□□□□□ -1.1
TNFRSF9-204ENST00000615230 KCNS1Q96KK3 526 aa8.15□□□□□ -1.1
TNFRSF9-204ENST00000615230 LTBP2Q14767 1821 aa8.15□□□□□ -1.1
TNFRSF9-204ENST00000615230 TEX38Q6PEX7 206 aa8.15□□□□□ -1.1
TNFRSF9-204ENST00000615230 IGFL2Q6UWQ7 119 aa8.15□□□□□ -1.1
TNFRSF9-204ENST00000615230 IGHV3OR16-12A0A075B7B8 117 aa8.15□□□□□ -1.1
TNFRSF9-204ENST00000615230 TRBV7-1A0A0A6YYK4 115 aa8.15□□□□□ -1.1
TNFRSF9-204ENST00000615230 TMEM187Q14656 261 aa8.15□□□□□ -1.1
TNFRSF9-204ENST00000615230 ZNF818PQ6ZRF7 136 aa8.15□□□□□ -1.1
TNFRSF9-204ENST00000615230 ITLN2Q8WWU7 325 aaPredicted RBP8.15□□□□□ -1.1
TNFRSF9-204ENST00000615230 HSPB7Q9UBY9 170 aa8.15□□□□□ -1.1
TNFRSF9-204ENST00000615230 J3KRW8 73 aa8.15□□□□□ -1.11
TNFRSF9-204ENST00000615230 MELTFP08582 738 aa8.15□□□□□ -1.11
TNFRSF9-204ENST00000615230 ANOS1P23352 680 aa8.15□□□□□ -1.11
TNFRSF9-204ENST00000615230 ZNF362Q5T0B9 420 aaPredicted RBP8.15□□□□□ -1.11
TNFRSF9-204ENST00000615230 GOLGA4Q13439 2230 aaKnown RBP8.15□□□□□ -1.11
TNFRSF9-204ENST00000615230 A0A1B0GUS0 222 aa8.15□□□□□ -1.11
TNFRSF9-204ENST00000615230 LOC102723971A0A1B0GUV8 181 aa8.15□□□□□ -1.11
TNFRSF9-204ENST00000615230 IL4P05112 153 aa8.15□□□□□ -1.11
TNFRSF9-204ENST00000615230 IGHV1-8P0DP01 117 aa8.15□□□□□ -1.11
TNFRSF9-204ENST00000615230 IGFBP3P17936 291 aaPredicted RBP8.15□□□□□ -1.11
TNFRSF9-204ENST00000615230 RCC1P18754 421 aaPredicted RBP8.15□□□□□ -1.11
TNFRSF9-204ENST00000615230 NTF3P20783 257 aa8.15□□□□□ -1.11
TNFRSF9-204ENST00000615230 HIST1H3AP68431 136 aa8.15□□□□□ -1.11
TNFRSF9-204ENST00000615230 BSXQ3C1V8 233 aa8.15□□□□□ -1.11
TNFRSF9-204ENST00000615230 CLEC9AQ6UXN8 241 aa8.15□□□□□ -1.11
TNFRSF9-204ENST00000615230 NCOR1P1Q9H4R4 102 aa8.15□□□□□ -1.11
TNFRSF9-204ENST00000615230 BET1LQ9NYM9 111 aa8.15□□□□□ -1.11
TNFRSF9-204ENST00000615230 HSPB8Q9UJY1 196 aa8.15□□□□□ -1.11
TNFRSF9-204ENST00000615230 A0A1W2PRX2 142 aa8.14□□□□□ -1.11
TNFRSF9-204ENST00000615230 SUMO1P63165 101 aaKnown RBP8.14□□□□□ -1.11
TNFRSF9-204ENST00000615230 TWIST1Q15672 202 aa8.14□□□□□ -1.11
TNFRSF9-204ENST00000615230 RPL39P5Q59GN2 51 aa8.14□□□□□ -1.11
TNFRSF9-204ENST00000615230 HIST1H2BAQ96A08 127 aa8.14□□□□□ -1.11
TNFRSF9-204ENST00000615230 SDF2L1Q9HCN8 221 aa8.14□□□□□ -1.11
TNFRSF9-204ENST00000615230 GREB1Q4ZG55 1949 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms