RNA–Protein interactions for RNA: ENST00000613988.4

CBWD1-223, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-223ENST00000613988 EBI3Q14213 229 aa17.15■□□□□ 0.34
CBWD1-223ENST00000613988 FOXRED2Q8IWF2 684 aa17.15■□□□□ 0.34
CBWD1-223ENST00000613988 LINC00482Q8N8I6 264 aa17.15■□□□□ 0.34
CBWD1-223ENST00000613988 LRTM2Q8N967 370 aa17.15■□□□□ 0.34
CBWD1-223ENST00000613988 C8orf31Q8N9H6 132 aa17.15■□□□□ 0.34
CBWD1-223ENST00000613988 EAF1Q96JC9 268 aaPredicted RBP17.15■□□□□ 0.34
CBWD1-223ENST00000613988 OR2A7Q96R45 310 aa17.15■□□□□ 0.34
CBWD1-223ENST00000613988 AGMATQ9BSE5 352 aa17.15■□□□□ 0.34
CBWD1-223ENST00000613988 OR2D2Q9H210 308 aa17.15■□□□□ 0.34
CBWD1-223ENST00000613988 GAB2Q9UQC2 676 aa17.15■□□□□ 0.34
CBWD1-223ENST00000613988 GOSR2O14653 212 aa17.14■□□□□ 0.33
CBWD1-223ENST00000613988 RPL23AP62750 156 aaKnown RBP17.14■□□□□ 0.33
CBWD1-223ENST00000613988 TMEM187Q14656 261 aa17.14■□□□□ 0.33
CBWD1-223ENST00000613988 ANKRD55Q3KP44 614 aa17.14■□□□□ 0.33
CBWD1-223ENST00000613988 FAM53AQ6NSI3 398 aaPredicted RBP17.14■□□□□ 0.33
CBWD1-223ENST00000613988 OR5M8Q8NGP6 311 aa17.14■□□□□ 0.33
CBWD1-223ENST00000613988 OR2T10Q8NGZ9 312 aa17.14■□□□□ 0.33
CBWD1-223ENST00000613988 ZFP57Q9NU63 452 aa17.14■□□□□ 0.33
CBWD1-223ENST00000613988 H0Y980 276 aa17.13■□□□□ 0.33
CBWD1-223ENST00000613988 OR5AC1P0C628 307 aa17.13■□□□□ 0.33
CBWD1-223ENST00000613988 F2RP25116 425 aa17.13■□□□□ 0.33
CBWD1-223ENST00000613988 RAP2BP61225 183 aa17.13■□□□□ 0.33
CBWD1-223ENST00000613988 TGIF2LXQ8IUE1 241 aa17.13■□□□□ 0.33
CBWD1-223ENST00000613988 MRPL41Q8IXM3 137 aaKnown RBP17.13■□□□□ 0.33
CBWD1-223ENST00000613988 FYTTD1Q96QD9 318 aaKnown RBP17.13■□□□□ 0.33
CBWD1-223ENST00000613988 ABHD14AQ9BUJ0 271 aa17.13■□□□□ 0.33
CBWD1-223ENST00000613988 TMEM222Q9H0R3 208 aa17.13■□□□□ 0.33
CBWD1-223ENST00000613988 NUDT19A8MXV4 375 aa17.12■□□□□ 0.33
CBWD1-223ENST00000613988 K7EIL1 84 aa17.12■□□□□ 0.33
CBWD1-223ENST00000613988 THBS3P49746 956 aa17.12■□□□□ 0.33
CBWD1-223ENST00000613988 KRTAP10-11P60412 298 aa17.12■□□□□ 0.33
CBWD1-223ENST00000613988 ETV3LQ6ZN32 361 aa17.12■□□□□ 0.33
CBWD1-223ENST00000613988 LGI3Q8N145 548 aa17.12■□□□□ 0.33
CBWD1-223ENST00000613988 STPG2Q8N412 459 aa17.12■□□□□ 0.33
CBWD1-223ENST00000613988 COMMD1Q8N668 190 aa17.12■□□□□ 0.33
CBWD1-223ENST00000613988 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.12■□□□□ 0.33
CBWD1-223ENST00000613988 ZNF439Q8NDP4 499 aa17.12■□□□□ 0.33
CBWD1-223ENST00000613988 GLYATL2Q8WU03 294 aa17.12■□□□□ 0.33
CBWD1-223ENST00000613988 ST6GALNAC6Q969X2 333 aa17.12■□□□□ 0.33
CBWD1-223ENST00000613988 LINC01548A6NM66 108 aa17.11■□□□□ 0.33
CBWD1-223ENST00000613988 UCP1P25874 307 aa17.11■□□□□ 0.33
CBWD1-223ENST00000613988 CD1BP29016 333 aa17.11■□□□□ 0.33
CBWD1-223ENST00000613988 GPR12P47775 334 aa17.11■□□□□ 0.33
CBWD1-223ENST00000613988 ZNF66Q6ZN08 573 aa17.11■□□□□ 0.33
CBWD1-223ENST00000613988 C18orf65Q6ZTR6 163 aa17.11■□□□□ 0.33
CBWD1-223ENST00000613988 C8orf86Q6ZUL3 223 aa17.11■□□□□ 0.33
CBWD1-223ENST00000613988 Q8N6K4 173 aa17.11■□□□□ 0.33
CBWD1-223ENST00000613988 TCTEX1D1Q8N7M0 179 aa17.11■□□□□ 0.33
CBWD1-223ENST00000613988 GPR61Q9BZJ8 451 aa17.11■□□□□ 0.33
CBWD1-223ENST00000613988 LIN7CQ9NUP9 197 aaKnown RBP17.11■□□□□ 0.33
CBWD1-223ENST00000613988 RNF150Q9ULK6 438 aa17.11■□□□□ 0.33
CBWD1-223ENST00000613988 BOLA2-SMG1P6H3BVE0 249 aa17.1■□□□□ 0.33
CBWD1-223ENST00000613988 ST8SIA5O15466 376 aa17.1■□□□□ 0.33
CBWD1-223ENST00000613988 HOXD3P31249 432 aaPredicted RBP17.1■□□□□ 0.33
CBWD1-223ENST00000613988 H2BFSP57053 126 aa17.1■□□□□ 0.33
CBWD1-223ENST00000613988 CATR1Q13166 79 aa17.1■□□□□ 0.33
CBWD1-223ENST00000613988 EIF4EBP1Q13541 118 aaPredicted RBP17.1■□□□□ 0.33
CBWD1-223ENST00000613988 ZFP69Q49AA0 526 aa17.1■□□□□ 0.33
CBWD1-223ENST00000613988 DEFB121Q5J5C9 76 aa17.1■□□□□ 0.33
CBWD1-223ENST00000613988 SLC25A48Q6ZT89 311 aaKnown RBP17.1■□□□□ 0.33
CBWD1-223ENST00000613988 KLHL30-AS1Q8NEE0 82 aa17.1■□□□□ 0.33
CBWD1-223ENST00000613988 DPF1Q92782 380 aa17.1■□□□□ 0.33
CBWD1-223ENST00000613988 IL22RA2Q969J5 263 aa17.1■□□□□ 0.33
CBWD1-223ENST00000613988 TMEM56Q96MV1 263 aa17.1■□□□□ 0.33
CBWD1-223ENST00000613988 TP53RKQ96S44 253 aa17.1■□□□□ 0.33
CBWD1-223ENST00000613988 HSD17B10Q99714 261 aaKnown RBP17.1■□□□□ 0.33
CBWD1-223ENST00000613988 IFI27L2Q9H2X8 130 aa17.1■□□□□ 0.33
CBWD1-223ENST00000613988 FAM212BQ9NTI7 297 aaPredicted RBP17.1■□□□□ 0.33
CBWD1-223ENST00000613988 PIPOXQ9P0Z9 390 aa17.1■□□□□ 0.33
CBWD1-223ENST00000613988 TMEM56-RWDD3S4R434 201 aa17.1■□□□□ 0.33
CBWD1-223ENST00000613988 DUXBA0A1W2PPF3 345 aa17.09■□□□□ 0.33
CBWD1-223ENST00000613988 AP4M1O00189 453 aa17.09■□□□□ 0.33
CBWD1-223ENST00000613988 SLC31A2O15432 143 aa17.09■□□□□ 0.33
CBWD1-223ENST00000613988 MOSP00540 346 aa17.09■□□□□ 0.33
CBWD1-223ENST00000613988 C1QBP02746 253 aa17.09■□□□□ 0.33
CBWD1-223ENST00000613988 ZNF134P52741 427 aa17.09■□□□□ 0.33
CBWD1-223ENST00000613988 SP6Q3SY56 376 aa17.09■□□□□ 0.33
CBWD1-223ENST00000613988 CT45A1Q5HYN5 189 aa17.09■□□□□ 0.33
CBWD1-223ENST00000613988 TEX38Q6PEX7 206 aa17.09■□□□□ 0.33
CBWD1-223ENST00000613988 GSG1LQ6UXU4 331 aa17.09■□□□□ 0.33
CBWD1-223ENST00000613988 Q8N9W7 124 aa17.09■□□□□ 0.33
CBWD1-223ENST00000613988 CT45A3Q8NHU0 189 aa17.09■□□□□ 0.33
CBWD1-223ENST00000613988 RASL11BQ9BPW5 248 aa17.09■□□□□ 0.33
CBWD1-223ENST00000613988 SDHAF2Q9NX18 166 aa17.09■□□□□ 0.33
CBWD1-223ENST00000613988 WI2-2373I1.2A0A1W2PRP0 233 aa17.08■□□□□ 0.32
CBWD1-223ENST00000613988 RAB29O14966 203 aa17.08■□□□□ 0.32
CBWD1-223ENST00000613988 TXNL1O43396 289 aa17.08■□□□□ 0.32
CBWD1-223ENST00000613988 TNFSF12O43508 249 aa17.08■□□□□ 0.32
CBWD1-223ENST00000613988 CDS2O95674 445 aa17.08■□□□□ 0.32
CBWD1-223ENST00000613988 IFNA21P01568 189 aa17.08■□□□□ 0.32
CBWD1-223ENST00000613988 MYCNOSP40205 109 aa17.08■□□□□ 0.32
CBWD1-223ENST00000613988 CYCSP99999 105 aaKnown RBP17.08■□□□□ 0.32
CBWD1-223ENST00000613988 EGFEM1PQ0D2K5 195 aa17.08■□□□□ 0.32
CBWD1-223ENST00000613988 ZNF695Q8IW36 515 aa17.08■□□□□ 0.32
CBWD1-223ENST00000613988 ABHD14BQ96IU4 210 aa17.08■□□□□ 0.32
CBWD1-223ENST00000613988 S1PR3Q99500 378 aa17.08■□□□□ 0.32
CBWD1-223ENST00000613988 MCRIP2Q9BUT9 160 aaKnown RBP17.08■□□□□ 0.32
CBWD1-223ENST00000613988 GON7Q9BXV9 100 aa17.08■□□□□ 0.32
CBWD1-223ENST00000613988 PLSCR3Q9NRY6 295 aa17.08■□□□□ 0.32
CBWD1-223ENST00000613988 SIX6O95475 246 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms