RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 TMEM38BQ9NVV0 291 aa18.33■□□□□ 0.52
POLR2J3-220ENST00000613744 GRIFINA4D1Z8 144 aa18.32■□□□□ 0.52
POLR2J3-220ENST00000613744 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP18.32■□□□□ 0.52
POLR2J3-220ENST00000613744 PRRG2O14669 202 aa18.32■□□□□ 0.52
POLR2J3-220ENST00000613744 HMGB3O15347 200 aaKnown RBP18.32■□□□□ 0.52
POLR2J3-220ENST00000613744 REG1AP05451 166 aa18.32■□□□□ 0.52
POLR2J3-220ENST00000613744 OR5G3P0C626 314 aa18.32■□□□□ 0.52
POLR2J3-220ENST00000613744 CDC34P49427 236 aaPredicted RBP18.32■□□□□ 0.52
POLR2J3-220ENST00000613744 PCBD1P61457 104 aa18.32■□□□□ 0.52
POLR2J3-220ENST00000613744 OR8G2PQ6IF36 304 aa18.32■□□□□ 0.52
POLR2J3-220ENST00000613744 SIGLECL1Q8N7X8 197 aa18.32■□□□□ 0.52
POLR2J3-220ENST00000613744 ST6GALNAC3Q8NDV1 305 aa18.32■□□□□ 0.52
POLR2J3-220ENST00000613744 OR5T1Q8NG75 326 aa18.32■□□□□ 0.52
POLR2J3-220ENST00000613744 OR10G8Q8NGN5 311 aa18.32■□□□□ 0.52
POLR2J3-220ENST00000613744 RNASE8Q8TDE3 154 aaKnown RBP18.32■□□□□ 0.52
POLR2J3-220ENST00000613744 MRPL18Q9H0U6 180 aaKnown RBP18.32■□□□□ 0.52
POLR2J3-220ENST00000613744 HSPB7Q9UBY9 170 aa18.32■□□□□ 0.52
POLR2J3-220ENST00000613744 ERRFI1Q9UJM3 462 aaPredicted RBP18.32■□□□□ 0.52
POLR2J3-220ENST00000613744 A0A1W2PN81 502 aa18.32■□□□□ 0.52
POLR2J3-220ENST00000613744 AHRRA9YTQ3 701 aa18.32■□□□□ 0.52
POLR2J3-220ENST00000613744 UBE2V1Q13404 147 aa18.32■□□□□ 0.52
POLR2J3-220ENST00000613744 MORN2Q502X0 79 aa18.32■□□□□ 0.52
POLR2J3-220ENST00000613744 BAGE3Q86Y29 109 aa18.32■□□□□ 0.52
POLR2J3-220ENST00000613744 BAGE2Q86Y30 109 aa18.32■□□□□ 0.52
POLR2J3-220ENST00000613744 KLHDC1Q8N7A1 406 aa18.32■□□□□ 0.52
POLR2J3-220ENST00000613744 Q8N976 141 aa18.32■□□□□ 0.52
POLR2J3-220ENST00000613744 IL36BQ9NZH7 164 aa18.32■□□□□ 0.52
POLR2J3-220ENST00000613744 LAMTOR2Q9Y2Q5 125 aa18.32■□□□□ 0.52
POLR2J3-220ENST00000613744 FAM215AQ9Y5M1 114 aa18.32■□□□□ 0.52
POLR2J3-220ENST00000613744 CLDN1O95832 211 aa18.31■□□□□ 0.52
POLR2J3-220ENST00000613744 ZNF32P17041 273 aa18.31■□□□□ 0.52
POLR2J3-220ENST00000613744 NTF4P34130 210 aa18.31■□□□□ 0.52
POLR2J3-220ENST00000613744 RBPJQ06330 500 aa18.31■□□□□ 0.52
POLR2J3-220ENST00000613744 ZNF585BQ52M93 769 aa18.31■□□□□ 0.52
POLR2J3-220ENST00000613744 TCF23Q7RTU1 214 aa18.31■□□□□ 0.52
POLR2J3-220ENST00000613744 MCEMP1Q8IX19 187 aa18.31■□□□□ 0.52
POLR2J3-220ENST00000613744 TUSC5Q8IXB3 177 aa18.31■□□□□ 0.52
POLR2J3-220ENST00000613744 MKXQ8IYA7 352 aa18.31■□□□□ 0.52
POLR2J3-220ENST00000613744 GCNT2Q8N0V5 402 aa18.31■□□□□ 0.52
POLR2J3-220ENST00000613744 CLCF1Q9UBD9 225 aa18.31■□□□□ 0.52
POLR2J3-220ENST00000613744 ZNF835Q9Y2P0 537 aa18.31■□□□□ 0.52
POLR2J3-220ENST00000613744 RNF212BA8MTL3 300 aa18.3■□□□□ 0.52
POLR2J3-220ENST00000613744 CCL25O15444 150 aa18.3■□□□□ 0.52
POLR2J3-220ENST00000613744 CD33P20138 364 aa18.3■□□□□ 0.52
POLR2J3-220ENST00000613744 MMDQ15546 238 aa18.3■□□□□ 0.52
POLR2J3-220ENST00000613744 SPATA45Q537H7 98 aa18.3■□□□□ 0.52
POLR2J3-220ENST00000613744 C9orf106Q8NAJ2 232 aa18.3■□□□□ 0.52
POLR2J3-220ENST00000613744 NPCDR1Q9BY65 106 aa18.3■□□□□ 0.52
POLR2J3-220ENST00000613744 TRGV8A0A0C4DH27 118 aa18.3■□□□□ 0.52
POLR2J3-220ENST00000613744 DIRC3C9JPN6 131 aa18.3■□□□□ 0.52
POLR2J3-220ENST00000613744 GPX1P07203 203 aa18.3■□□□□ 0.52
POLR2J3-220ENST00000613744 IGLC2P0DOY2 106 aa18.3■□□□□ 0.52
POLR2J3-220ENST00000613744 IGLC3P0DOY3 106 aa18.3■□□□□ 0.52
POLR2J3-220ENST00000613744 TIMP3P35625 211 aa18.3■□□□□ 0.52
POLR2J3-220ENST00000613744 RPL19P84098 196 aaKnown RBP18.3■□□□□ 0.52
POLR2J3-220ENST00000613744 COX19Q49B96 90 aa18.3■□□□□ 0.52
POLR2J3-220ENST00000613744 SEM1Q6ZVN7 128 aa18.3■□□□□ 0.52
POLR2J3-220ENST00000613744 AAED1Q7RTV5 226 aa18.3■□□□□ 0.52
POLR2J3-220ENST00000613744 STPG4Q8N801 248 aa18.3■□□□□ 0.52
POLR2J3-220ENST00000613744 OR10P1Q8NGE3 313 aa18.3■□□□□ 0.52
POLR2J3-220ENST00000613744 OR2H1Q9GZK4 316 aa18.3■□□□□ 0.52
POLR2J3-220ENST00000613744 PMS2P5A8MQ11 134 aa18.29■□□□□ 0.52
POLR2J3-220ENST00000613744 WDR1O75083 606 aa18.29■□□□□ 0.52
POLR2J3-220ENST00000613744 NDUFB4O95168 129 aa18.29■□□□□ 0.52
POLR2J3-220ENST00000613744 HNRNPA3P51991 378 aaKnown RBP18.29■□□□□ 0.52
POLR2J3-220ENST00000613744 MRPS16Q9Y3D3 137 aaKnown RBP18.29■□□□□ 0.52
POLR2J3-220ENST00000613744 CHD6Q8TD26 2715 aa18.29■□□□□ 0.52
POLR2J3-220ENST00000613744 IGLV2-14P01704 120 aa18.29■□□□□ 0.52
POLR2J3-220ENST00000613744 UQCRFS1P47985 274 aa18.29■□□□□ 0.52
POLR2J3-220ENST00000613744 PSG4Q00888 419 aa18.29■□□□□ 0.52
POLR2J3-220ENST00000613744 ZNF90Q03938 601 aa18.29■□□□□ 0.52
POLR2J3-220ENST00000613744 C1orf185Q5T7R7 199 aa18.29■□□□□ 0.52
POLR2J3-220ENST00000613744 MOB1BQ7L9L4 216 aa18.29■□□□□ 0.52
POLR2J3-220ENST00000613744 OR1K1Q8NGR3 316 aa18.29■□□□□ 0.52
POLR2J3-220ENST00000613744 ZNF837Q96EG3 531 aaPredicted RBP18.29■□□□□ 0.52
POLR2J3-220ENST00000613744 C1QTNF5Q9BXJ0 243 aa18.29■□□□□ 0.52
POLR2J3-220ENST00000613744 FBXL7Q9UJT9 491 aa18.29■□□□□ 0.52
POLR2J3-220ENST00000613744 LY96Q9Y6Y9 160 aa18.29■□□□□ 0.52
POLR2J3-220ENST00000613744 MED12LQ86YW9 2145 aa18.28■□□□□ 0.52
POLR2J3-220ENST00000613744 TRAPPC2LH3BP13 241 aa18.28■□□□□ 0.52
POLR2J3-220ENST00000613744 RBFOX2O43251 390 aaKnown RBP eCLIP18.28■□□□□ 0.52
POLR2J3-220ENST00000613744 IGHV3-9P01782 118 aa18.28■□□□□ 0.52
POLR2J3-220ENST00000613744 PRSS12P56730 875 aa18.28■□□□□ 0.52
POLR2J3-220ENST00000613744 OR10J3Q5JRS4 329 aa18.28■□□□□ 0.52
POLR2J3-220ENST00000613744 ZNF738Q8NE65 137 aa18.28■□□□□ 0.52
POLR2J3-220ENST00000613744 MRGPRDQ8TDS7 321 aa18.28■□□□□ 0.52
POLR2J3-220ENST00000613744 RDH5Q92781 318 aa18.28■□□□□ 0.52
POLR2J3-220ENST00000613744 ZNF253O75346 499 aa18.27■□□□□ 0.52
POLR2J3-220ENST00000613744 MT-ND6P03923 174 aa18.27■□□□□ 0.52
POLR2J3-220ENST00000613744 TXN2Q99757 166 aa18.27■□□□□ 0.52
POLR2J3-220ENST00000613744 GNB1LQ9BYB4 327 aa18.27■□□□□ 0.52
POLR2J3-220ENST00000613744 MRPL33O75394 65 aaKnown RBP18.27■□□□□ 0.51
POLR2J3-220ENST00000613744 HYPMO75409 117 aa18.27■□□□□ 0.51
POLR2J3-220ENST00000613744 CBLN1P23435 193 aa18.27■□□□□ 0.51
POLR2J3-220ENST00000613744 LRP11Q86VZ4 500 aa18.27■□□□□ 0.51
POLR2J3-220ENST00000613744 TCTEX1D1Q8N7M0 179 aa18.27■□□□□ 0.51
POLR2J3-220ENST00000613744 OR5B3Q8NH48 314 aa18.27■□□□□ 0.51
POLR2J3-220ENST00000613744 STARD4Q96DR4 205 aa18.27■□□□□ 0.51
POLR2J3-220ENST00000613744 TMEM204Q9BSN7 226 aa18.27■□□□□ 0.51
POLR2J3-220ENST00000613744 CDC42EP3Q9UKI2 254 aa18.27■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms