RNA–Protein interactions for RNA: ENST00000611598.1

PCDHGB1-202, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB1, Length 2,592 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-202ENST00000611598 HSD17B10Q99714 261 aaKnown RBP12.55□□□□□ -0.4
PCDHGB1-202ENST00000611598 DSPP15924 2871 aaKnown RBP12.55□□□□□ -0.4
PCDHGB1-202ENST00000611598 TRAV3A0A0B4J244 114 aa12.54□□□□□ -0.4
PCDHGB1-202ENST00000611598 IQCF6A8MYZ5 107 aa12.54□□□□□ -0.4
PCDHGB1-202ENST00000611598 PRSS46E5RG02 174 aa12.54□□□□□ -0.4
PCDHGB1-202ENST00000611598 CRISP2P16562 243 aa12.54□□□□□ -0.4
PCDHGB1-202ENST00000611598 TPPP2P59282 170 aa12.54□□□□□ -0.4
PCDHGB1-202ENST00000611598 RPL31P62899 125 aaKnown RBP12.54□□□□□ -0.4
PCDHGB1-202ENST00000611598 ZNF718Q3SXZ3 478 aa12.54□□□□□ -0.4
PCDHGB1-202ENST00000611598 PRAMEF5Q5TYX0 476 aa12.54□□□□□ -0.4
PCDHGB1-202ENST00000611598 TEX43Q6ZNM6 134 aa12.54□□□□□ -0.4
PCDHGB1-202ENST00000611598 DEFB127Q9H1M4 99 aa12.54□□□□□ -0.4
PCDHGB1-202ENST00000611598 HEYLQ9NQ87 328 aaPredicted RBP12.54□□□□□ -0.4
PCDHGB1-202ENST00000611598 RNF114Q9Y508 228 aa12.54□□□□□ -0.4
PCDHGB1-202ENST00000611598 TET2Q6N021 2002 aaPredicted RBP12.54□□□□□ -0.4
PCDHGB1-202ENST00000611598 A0A1B0GWJ7 208 aa12.54□□□□□ -0.4
PCDHGB1-202ENST00000611598 LYZL6O75951 148 aa12.54□□□□□ -0.4
PCDHGB1-202ENST00000611598 CXorf1O96002 111 aa12.54□□□□□ -0.4
PCDHGB1-202ENST00000611598 MEOX1P50221 254 aa12.54□□□□□ -0.4
PCDHGB1-202ENST00000611598 KRTCAP3Q53RY4 240 aa12.54□□□□□ -0.4
PCDHGB1-202ENST00000611598 ACP7Q6ZNF0 438 aa12.54□□□□□ -0.4
PCDHGB1-202ENST00000611598 KLF14Q8TD94 323 aaPredicted RBP12.54□□□□□ -0.4
PCDHGB1-202ENST00000611598 SEPSECSQ9HD40 501 aaKnown RBP12.54□□□□□ -0.4
PCDHGB1-202ENST00000611598 FZR1Q9UM11 496 aa12.54□□□□□ -0.4
PCDHGB1-202ENST00000611598 FOXH1O75593 365 aa12.53□□□□□ -0.4
PCDHGB1-202ENST00000611598 DUTP33316 252 aaKnown RBP12.53□□□□□ -0.4
PCDHGB1-202ENST00000611598 EDDM3AQ14507 147 aa12.53□□□□□ -0.4
PCDHGB1-202ENST00000611598 TCTEX1D1Q8N7M0 179 aa12.53□□□□□ -0.4
PCDHGB1-202ENST00000611598 VN1R17PQ8TDU5 208 aa12.53□□□□□ -0.4
PCDHGB1-202ENST00000611598 TMEM208Q9BTX3 173 aa12.53□□□□□ -0.4
PCDHGB1-202ENST00000611598 TNFSF13O75888 250 aa12.53□□□□□ -0.4
PCDHGB1-202ENST00000611598 VDAC2P45880 294 aaPredicted RBP12.53□□□□□ -0.4
PCDHGB1-202ENST00000611598 IER3P46695 156 aa12.53□□□□□ -0.4
PCDHGB1-202ENST00000611598 GABRA6Q16445 453 aa12.53□□□□□ -0.4
PCDHGB1-202ENST00000611598 MSL2Q9HCI7 577 aa12.53□□□□□ -0.4
PCDHGB1-202ENST00000611598 IL36BQ9NZH7 164 aa12.53□□□□□ -0.4
PCDHGB1-202ENST00000611598 FOXJ2Q9P0K8 574 aa12.53□□□□□ -0.4
PCDHGB1-202ENST00000611598 GFRA3O60609 400 aa12.52□□□□□ -0.4
PCDHGB1-202ENST00000611598 MPDU1O75352 247 aa12.52□□□□□ -0.4
PCDHGB1-202ENST00000611598 RPLP1P05386 114 aaKnown RBP12.52□□□□□ -0.4
PCDHGB1-202ENST00000611598 NPSP0C0P6 89 aa12.52□□□□□ -0.4
PCDHGB1-202ENST00000611598 GCHFRP30047 84 aa12.52□□□□□ -0.4
PCDHGB1-202ENST00000611598 MRPL49Q13405 166 aaKnown RBP12.52□□□□□ -0.4
PCDHGB1-202ENST00000611598 OR5I1Q13606 314 aa12.52□□□□□ -0.4
PCDHGB1-202ENST00000611598 OR1L6Q8NGR2 347 aa12.52□□□□□ -0.4
PCDHGB1-202ENST00000611598 OR4A16Q8NH70 328 aa12.52□□□□□ -0.4
PCDHGB1-202ENST00000611598 C9orf172C9J069 976 aa12.52□□□□□ -0.41
PCDHGB1-202ENST00000611598 C15orf65H3BRN8 121 aa12.52□□□□□ -0.41
PCDHGB1-202ENST00000611598 FCN1O00602 326 aa12.52□□□□□ -0.41
PCDHGB1-202ENST00000611598 CER1O95813 267 aa12.52□□□□□ -0.41
PCDHGB1-202ENST00000611598 GPR12P47775 334 aa12.52□□□□□ -0.41
PCDHGB1-202ENST00000611598 COMPP49747 757 aaPredicted RBP12.52□□□□□ -0.41
PCDHGB1-202ENST00000611598 RPL39P5Q59GN2 51 aa12.52□□□□□ -0.41
PCDHGB1-202ENST00000611598 WDR82Q6UXN9 313 aa12.52□□□□□ -0.41
PCDHGB1-202ENST00000611598 C20orf144Q9BQM9 153 aa12.52□□□□□ -0.41
PCDHGB1-202ENST00000611598 SPRR3Q9UBC9 169 aa12.52□□□□□ -0.41
PCDHGB1-202ENST00000611598 LOC400499M0QZD8 3231 aa12.51□□□□□ -0.41
PCDHGB1-202ENST00000611598 IGHV1-2P23083 117 aa12.51□□□□□ -0.41
PCDHGB1-202ENST00000611598 LGALS4P56470 323 aa12.51□□□□□ -0.41
PCDHGB1-202ENST00000611598 PAFAH1B2P68402 229 aa12.51□□□□□ -0.41
PCDHGB1-202ENST00000611598 BATFQ16520 125 aa12.51□□□□□ -0.41
PCDHGB1-202ENST00000611598 BAGE3Q86Y29 109 aa12.51□□□□□ -0.41
PCDHGB1-202ENST00000611598 BAGE2Q86Y30 109 aa12.51□□□□□ -0.41
PCDHGB1-202ENST00000611598 GCNT2Q8N0V5 402 aa12.51□□□□□ -0.41
PCDHGB1-202ENST00000611598 WDR31Q8NA23 367 aa12.51□□□□□ -0.41
PCDHGB1-202ENST00000611598 MIEN1Q9BRT3 115 aa12.51□□□□□ -0.41
PCDHGB1-202ENST00000611598 COL27A1Q8IZC6 1860 aaPredicted RBP12.51□□□□□ -0.41
PCDHGB1-202ENST00000611598 SNURFLB1AK76 121 aa12.51□□□□□ -0.41
PCDHGB1-202ENST00000611598 M0R1X1 148 aa12.51□□□□□ -0.41
PCDHGB1-202ENST00000611598 IL6RP08887 468 aaPredicted RBP12.51□□□□□ -0.41
PCDHGB1-202ENST00000611598 EFNB3Q15768 340 aa12.51□□□□□ -0.41
PCDHGB1-202ENST00000611598 AARDQ4LEZ3 155 aa12.51□□□□□ -0.41
PCDHGB1-202ENST00000611598 LRFN3Q9BTN0 628 aa12.51□□□□□ -0.41
PCDHGB1-202ENST00000611598 SPENQ96T58 3664 aaKnown RBP12.51□□□□□ -0.41
PCDHGB1-202ENST00000611598 J3QW42 95 aa12.5□□□□□ -0.41
PCDHGB1-202ENST00000611598 DLEU1O43261 78 aa12.5□□□□□ -0.41
PCDHGB1-202ENST00000611598 SPINK4O60575 86 aa12.5□□□□□ -0.41
PCDHGB1-202ENST00000611598 ESDP10768 282 aa12.5□□□□□ -0.41
PCDHGB1-202ENST00000611598 TNFSF10P50591 281 aa12.5□□□□□ -0.41
PCDHGB1-202ENST00000611598 ARSJQ5FYB0 599 aaPredicted RBP12.5□□□□□ -0.41
PCDHGB1-202ENST00000611598 RNFT1Q5M7Z0 435 aa12.5□□□□□ -0.41
PCDHGB1-202ENST00000611598 OR5AU1Q8NGC0 362 aa12.5□□□□□ -0.41
PCDHGB1-202ENST00000611598 TXNDC17Q9BRA2 123 aa12.5□□□□□ -0.41
PCDHGB1-202ENST00000611598 SAMD10Q9BYL1 202 aa12.5□□□□□ -0.41
PCDHGB1-202ENST00000611598 ABI3Q9P2A4 366 aa12.5□□□□□ -0.41
PCDHGB1-202ENST00000611598 LSM4Q9Y4Z0 139 aaKnown RBP12.5□□□□□ -0.41
PCDHGB1-202ENST00000611598 SP1P08047 785 aa12.5□□□□□ -0.41
PCDHGB1-202ENST00000611598 RELBQ01201 579 aa12.5□□□□□ -0.41
PCDHGB1-202ENST00000611598 LPAL2Q16609 132 aa12.5□□□□□ -0.41
PCDHGB1-202ENST00000611598 UTF1Q5T230 341 aa12.5□□□□□ -0.41
PCDHGB1-202ENST00000611598 CD177Q8N6Q3 437 aa12.5□□□□□ -0.41
PCDHGB1-202ENST00000611598 STPG3Q8N7X2 389 aa12.5□□□□□ -0.41
PCDHGB1-202ENST00000611598 ST6GALNAC3Q8NDV1 305 aa12.5□□□□□ -0.41
PCDHGB1-202ENST00000611598 FAM103A1Q9BTL3 118 aaKnown RBP12.5□□□□□ -0.41
PCDHGB1-202ENST00000611598 SPRY4Q9C004 299 aa12.5□□□□□ -0.41
PCDHGB1-202ENST00000611598 FBXL7Q9UJT9 491 aa12.5□□□□□ -0.41
PCDHGB1-202ENST00000611598 ASPMQ8IZT6 3477 aa12.5□□□□□ -0.41
PCDHGB1-202ENST00000611598 A0A1W2PNU3 283 aaPredicted RBP12.49□□□□□ -0.41
PCDHGB1-202ENST00000611598 SPINT2O43291 252 aa12.49□□□□□ -0.41
PCDHGB1-202ENST00000611598 AGFG2O95081 481 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 443.2 ms