RNA–Protein interactions for RNA: ENST00000603885.5

CCDC12-208, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-208ENST00000603885 EXOSC2Q13868 293 aaKnown RBP13.86□□□□□ -0.19
CCDC12-208ENST00000603885 TATDN3Q17R31 274 aa13.86□□□□□ -0.19
CCDC12-208ENST00000603885 RPEL1Q2QD12 228 aa13.86□□□□□ -0.19
CCDC12-208ENST00000603885 HAPLN4Q86UW8 402 aa13.86□□□□□ -0.19
CCDC12-208ENST00000603885 SPAG16Q8N0X2 631 aa13.86□□□□□ -0.19
CCDC12-208ENST00000603885 KCTD12Q96CX2 325 aaKnown RBP13.86□□□□□ -0.19
CCDC12-208ENST00000603885 AIFM2Q9BRQ8 373 aa13.86□□□□□ -0.19
CCDC12-208ENST00000603885 TRBV9A0A0B4J1U6 114 aa13.85□□□□□ -0.19
CCDC12-208ENST00000603885 DPPA5A6NC42 116 aa13.85□□□□□ -0.19
CCDC12-208ENST00000603885 RBFOX2O43251 390 aaKnown RBP eCLIP13.85□□□□□ -0.191e-8■■■■□ 19.9
CCDC12-208ENST00000603885 TAS2R20P59543 309 aa13.85□□□□□ -0.19
CCDC12-208ENST00000603885 HERV-K104P61576 105 aa13.85□□□□□ -0.19
CCDC12-208ENST00000603885 ZNF45Q02386 682 aa13.85□□□□□ -0.19
CCDC12-208ENST00000603885 SSX9Q7RTT3 188 aa13.85□□□□□ -0.19
CCDC12-208ENST00000603885 TMEM17Q86X19 198 aa13.85□□□□□ -0.19
CCDC12-208ENST00000603885 NECAP1Q8NC96 275 aa13.85□□□□□ -0.19
CCDC12-208ENST00000603885 BORCS5Q969J3 196 aa13.85□□□□□ -0.19
CCDC12-208ENST00000603885 SLC25A46Q96AG3 418 aa13.85□□□□□ -0.19
CCDC12-208ENST00000603885 FYTTD1Q96QD9 318 aaKnown RBP13.85□□□□□ -0.19
CCDC12-208ENST00000603885 EHFQ9NZC4 300 aa13.85□□□□□ -0.19
CCDC12-208ENST00000603885 ZNF257Q9Y2Q1 563 aa13.85□□□□□ -0.19
CCDC12-208ENST00000603885 HMX3A6NHT5 357 aa13.84□□□□□ -0.19
CCDC12-208ENST00000603885 TRIM64CA6NLI5 447 aa13.84□□□□□ -0.19
CCDC12-208ENST00000603885 TEX22C9J3V5 150 aa13.84□□□□□ -0.19
CCDC12-208ENST00000603885 SULT1C2O00338 296 aa13.84□□□□□ -0.19
CCDC12-208ENST00000603885 RPL8P62917 257 aaKnown RBP13.84□□□□□ -0.19
CCDC12-208ENST00000603885 ZNF818PQ6ZRF7 136 aa13.84□□□□□ -0.19
CCDC12-208ENST00000603885 OR4A5Q8NH83 315 aa13.84□□□□□ -0.19
CCDC12-208ENST00000603885 FUNDC2Q9BWH2 189 aa13.84□□□□□ -0.19
CCDC12-208ENST00000603885 BET1LQ9NYM9 111 aa13.84□□□□□ -0.19
CCDC12-208ENST00000603885 ANAPC10Q9UM13 185 aa13.84□□□□□ -0.19
CCDC12-208ENST00000603885 STAB2Q8WWQ8 2551 aa13.83□□□□□ -0.19
CCDC12-208ENST00000603885 NPIPB5A8MRT5 1133 aa13.83□□□□□ -0.2
CCDC12-208ENST00000603885 OR2J3O76001 311 aa13.83□□□□□ -0.2
CCDC12-208ENST00000603885 IL6RP08887 468 aaPredicted RBP13.83□□□□□ -0.2
CCDC12-208ENST00000603885 ZNF735P0CB33 412 aa13.83□□□□□ -0.2
CCDC12-208ENST00000603885 TAS2R31P59538 309 aa13.83□□□□□ -0.2
CCDC12-208ENST00000603885 TAS2R46P59540 309 aa13.83□□□□□ -0.2
CCDC12-208ENST00000603885 NCS1P62166 190 aa13.83□□□□□ -0.2
CCDC12-208ENST00000603885 C15orf32Q32M92 178 aa13.83□□□□□ -0.2
CCDC12-208ENST00000603885 FAM209BQ5JX69 171 aa13.83□□□□□ -0.2
CCDC12-208ENST00000603885 OR4A47Q6IF82 309 aa13.83□□□□□ -0.2
CCDC12-208ENST00000603885 HRASLSQ9HDD0 168 aa13.83□□□□□ -0.2
CCDC12-208ENST00000603885 SLC2A9Q9NRM0 540 aa13.83□□□□□ -0.2
CCDC12-208ENST00000603885 ADAM30Q9UKF2 790 aa13.83□□□□□ -0.2
CCDC12-208ENST00000603885 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.82□□□□□ -0.2
CCDC12-208ENST00000603885 E7EUB6 86 aa13.82□□□□□ -0.2
CCDC12-208ENST00000603885 HPRT1P00492 218 aa13.82□□□□□ -0.2
CCDC12-208ENST00000603885 NQO2P16083 231 aa13.82□□□□□ -0.2
CCDC12-208ENST00000603885 HLA-GP17693 338 aa13.82□□□□□ -0.2
CCDC12-208ENST00000603885 PRSS3P35030 304 aa13.82□□□□□ -0.2
CCDC12-208ENST00000603885 RFX2P48378 723 aa13.82□□□□□ -0.2
CCDC12-208ENST00000603885 AADACL3Q5VUY0 350 aa13.82□□□□□ -0.2
CCDC12-208ENST00000603885 DHRS11Q6UWP2 260 aa13.82□□□□□ -0.2
CCDC12-208ENST00000603885 IL34Q6ZMJ4 242 aa13.82□□□□□ -0.2
CCDC12-208ENST00000603885 OR5H2Q8NGV7 314 aa13.82□□□□□ -0.2
CCDC12-208ENST00000603885 OR51H1Q8NH63 302 aa13.82□□□□□ -0.2
CCDC12-208ENST00000603885 CD300LFQ8TDQ1 290 aa13.82□□□□□ -0.2
CCDC12-208ENST00000603885 PEMTQ9UBM1 199 aa13.82□□□□□ -0.2
CCDC12-208ENST00000603885 H0Y980 276 aa13.81□□□□□ -0.2
CCDC12-208ENST00000603885 BMPR1BO00238 502 aa13.81□□□□□ -0.2
CCDC12-208ENST00000603885 DHFRP00374 187 aa13.81□□□□□ -0.2
CCDC12-208ENST00000603885 PMP2P02689 132 aa13.81□□□□□ -0.2
CCDC12-208ENST00000603885 EIF4EP06730 217 aaKnown RBP13.81□□□□□ -0.2
CCDC12-208ENST00000603885 FRMD6-AS1P0C7T7 363 aa13.81□□□□□ -0.2
CCDC12-208ENST00000603885 NAT1P18440 290 aa13.81□□□□□ -0.2
CCDC12-208ENST00000603885 GNRHRP30968 328 aa13.81□□□□□ -0.2
CCDC12-208ENST00000603885 VBP1P61758 197 aa13.81□□□□□ -0.2
CCDC12-208ENST00000603885 MOB3AQ96BX8 217 aa13.81□□□□□ -0.2
CCDC12-208ENST00000603885 CMTM3Q96MX0 182 aa13.81□□□□□ -0.2
CCDC12-208ENST00000603885 ZNF2Q9BSG1 426 aaPredicted RBP13.81□□□□□ -0.2
CCDC12-208ENST00000603885 SIGLEC8Q9NYZ4 499 aa13.81□□□□□ -0.2
CCDC12-208ENST00000603885 COMMD3Q9UBI1 195 aa13.81□□□□□ -0.2
CCDC12-208ENST00000603885 HUWE1Q7Z6Z7 4374 aaKnown RBP13.81□□□□□ -0.2
CCDC12-208ENST00000603885 SMIM31A0A1B0GVY4 71 aa13.8□□□□□ -0.2
CCDC12-208ENST00000603885 A0A1B0GW64 132 aa13.8□□□□□ -0.2
CCDC12-208ENST00000603885 APOA1P02647 267 aa13.8□□□□□ -0.2
CCDC12-208ENST00000603885 CRYGCP07315 174 aa13.8□□□□□ -0.2
CCDC12-208ENST00000603885 CSN3P07498 182 aa13.8□□□□□ -0.2
CCDC12-208ENST00000603885 AREGP15514 252 aa13.8□□□□□ -0.2
CCDC12-208ENST00000603885 PSMB6P28072 239 aa13.8□□□□□ -0.2
CCDC12-208ENST00000603885 POU2AF1Q16633 256 aa13.8□□□□□ -0.2
CCDC12-208ENST00000603885 C19orf35Q6ZS72 473 aa13.8□□□□□ -0.2
CCDC12-208ENST00000603885 SBSPONQ8IVN8 264 aa13.8□□□□□ -0.2
CCDC12-208ENST00000603885 PLEKHA2Q9HB19 425 aa13.8□□□□□ -0.2
CCDC12-208ENST00000603885 COMMD9Q9P000 198 aa13.8□□□□□ -0.2
CCDC12-208ENST00000603885 FBXL7Q9UJT9 491 aa13.8□□□□□ -0.2
CCDC12-208ENST00000603885 MYOD1P15172 320 aa13.79□□□□□ -0.2
CCDC12-208ENST00000603885 HIST1H1BP16401 226 aaKnown RBP13.79□□□□□ -0.2
CCDC12-208ENST00000603885 LCN12Q6JVE5 192 aa13.79□□□□□ -0.2
CCDC12-208ENST00000603885 SGPP2Q8IWX5 399 aa13.79□□□□□ -0.2
CCDC12-208ENST00000603885 CMTM1Q8IZ96 169 aa13.79□□□□□ -0.2
CCDC12-208ENST00000603885 DMBX1Q8NFW5 382 aa13.79□□□□□ -0.2
CCDC12-208ENST00000603885 OR6F1Q8NGZ6 308 aa13.79□□□□□ -0.2
CCDC12-208ENST00000603885 FANCD2OSQ96PS1 177 aa13.79□□□□□ -0.2
CCDC12-208ENST00000603885 COMMD5Q9GZQ3 224 aa13.79□□□□□ -0.2
CCDC12-208ENST00000603885 UPK2O00526 184 aa13.78□□□□□ -0.2
CCDC12-208ENST00000603885 S1PR2O95136 353 aa13.78□□□□□ -0.2
CCDC12-208ENST00000603885 RLN1P04808 185 aa13.78□□□□□ -0.2
CCDC12-208ENST00000603885 DEFA4P12838 97 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms