RNA–Protein interactions for RNA: ENST00000602086.5

ZNF548-212, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-212ENST00000602086 TAAR5O14804 337 aa11.6□□□□□ -0.55
ZNF548-212ENST00000602086 OR9G9P0C7N8 305 aa11.6□□□□□ -0.55
ZNF548-212ENST00000602086 HKR1P10072 659 aa11.6□□□□□ -0.55
ZNF548-212ENST00000602086 SPCS3P61009 180 aa11.6□□□□□ -0.55
ZNF548-212ENST00000602086 UBE2KP61086 200 aa11.6□□□□□ -0.55
ZNF548-212ENST00000602086 VAMP2P63027 116 aa11.6□□□□□ -0.55
ZNF548-212ENST00000602086 IZUMO4Q1ZYL8 232 aa11.6□□□□□ -0.55
ZNF548-212ENST00000602086 KRTAP21-3Q3LHN1 58 aa11.6□□□□□ -0.55
ZNF548-212ENST00000602086 LDLRAD2Q5SZI1 272 aa11.6□□□□□ -0.55
ZNF548-212ENST00000602086 OR4A16Q8NH70 328 aa11.6□□□□□ -0.55
ZNF548-212ENST00000602086 CFHR4Q92496 578 aa11.6□□□□□ -0.55
ZNF548-212ENST00000602086 HARBI1Q96MB7 349 aa11.6□□□□□ -0.55
ZNF548-212ENST00000602086 CIB3Q96Q77 187 aaPredicted RBP11.6□□□□□ -0.55
ZNF548-212ENST00000602086 ARL6Q9H0F7 186 aa11.6□□□□□ -0.55
ZNF548-212ENST00000602086 LYRM2Q9NU23 88 aaPredicted RBP11.6□□□□□ -0.55
ZNF548-212ENST00000602086 TMEM14BQ9NUH8 114 aa11.6□□□□□ -0.55
ZNF548-212ENST00000602086 FKBP11Q9NYL4 201 aa11.6□□□□□ -0.55
ZNF548-212ENST00000602086 PRNDQ9UKY0 176 aa11.6□□□□□ -0.55
ZNF548-212ENST00000602086 ZNF257Q9Y2Q1 563 aa11.6□□□□□ -0.55
ZNF548-212ENST00000602086 BOLA1Q9Y3E2 137 aa11.6□□□□□ -0.55
ZNF548-212ENST00000602086 AUP1Q9Y679 476 aa11.6□□□□□ -0.55
ZNF548-212ENST00000602086 SRRM4A7MD48 611 aaKnown RBP11.59□□□□□ -0.55
ZNF548-212ENST00000602086 BCL2L11O43521 198 aa11.59□□□□□ -0.55
ZNF548-212ENST00000602086 CHST1O43916 411 aa11.59□□□□□ -0.55
ZNF548-212ENST00000602086 TSC22D2O75157 780 aa11.59□□□□□ -0.55
ZNF548-212ENST00000602086 SPDEFO95238 335 aa11.59□□□□□ -0.55
ZNF548-212ENST00000602086 IGLV2-23P01705 113 aa11.59□□□□□ -0.55
ZNF548-212ENST00000602086 RPL12P30050 165 aaKnown RBP11.59□□□□□ -0.55
ZNF548-212ENST00000602086 RPL23AP62750 156 aaKnown RBP11.59□□□□□ -0.55
ZNF548-212ENST00000602086 VMA21Q3ZAQ7 101 aa11.59□□□□□ -0.55
ZNF548-212ENST00000602086 MOB3BQ86TA1 216 aa11.59□□□□□ -0.55
ZNF548-212ENST00000602086 OR2C3Q8N628 320 aa11.59□□□□□ -0.55
ZNF548-212ENST00000602086 TEX45Q8NA69 505 aa11.59□□□□□ -0.55
ZNF548-212ENST00000602086 TMEM167AQ8TBQ9 72 aa11.59□□□□□ -0.55
ZNF548-212ENST00000602086 TSNAXQ99598 290 aaKnown RBP11.59□□□□□ -0.55
ZNF548-212ENST00000602086 FOXC2Q99958 501 aa11.59□□□□□ -0.55
ZNF548-212ENST00000602086 SLC25A31Q9H0C2 315 aa11.59□□□□□ -0.55
ZNF548-212ENST00000602086 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.58□□□□□ -0.566e-11■■■■■ 33.7
ZNF548-212ENST00000602086 ZNF469Q96JG9 3925 aaPredicted RBP11.58□□□□□ -0.56
ZNF548-212ENST00000602086 CENPVL3A0A0U1RRI6 287 aa11.58□□□□□ -0.56
ZNF548-212ENST00000602086 KANTRA0A1W2PQU2 76 aa11.58□□□□□ -0.56
ZNF548-212ENST00000602086 RGS13O14921 159 aa11.58□□□□□ -0.56
ZNF548-212ENST00000602086 SSSCA1O60232 199 aa11.58□□□□□ -0.56
ZNF548-212ENST00000602086 KBTBD11O94819 623 aa11.58□□□□□ -0.56
ZNF548-212ENST00000602086 SCAF4O95104 1147 aaKnown RBP11.58□□□□□ -0.56
ZNF548-212ENST00000602086 SAA1P0DJI8 122 aaPredicted RBP11.58□□□□□ -0.56
ZNF548-212ENST00000602086 CD99P14209 185 aa11.58□□□□□ -0.56
ZNF548-212ENST00000602086 PAX9P55771 341 aa11.58□□□□□ -0.56
ZNF548-212ENST00000602086 BPIFB3P59826 476 aa11.58□□□□□ -0.56
ZNF548-212ENST00000602086 HSPE1P61604 102 aaKnown RBP11.58□□□□□ -0.56
ZNF548-212ENST00000602086 RPS16P62249 146 aaKnown RBP11.58□□□□□ -0.56
ZNF548-212ENST00000602086 PRB3Q04118 309 aaPredicted RBP11.58□□□□□ -0.56
ZNF548-212ENST00000602086 BAXQ07812 192 aa11.58□□□□□ -0.56
ZNF548-212ENST00000602086 EBI3Q14213 229 aa11.58□□□□□ -0.56
ZNF548-212ENST00000602086 SSX9Q7RTT3 188 aa11.58□□□□□ -0.56
ZNF548-212ENST00000602086 SLC51BQ86UW2 128 aa11.58□□□□□ -0.56
ZNF548-212ENST00000602086 ARPC5LQ9BPX5 153 aa11.58□□□□□ -0.56
ZNF548-212ENST00000602086 HIF1ANQ9NWT6 349 aa11.58□□□□□ -0.56
ZNF548-212ENST00000602086 SETD2Q9BYW2 2564 aaPredicted RBP11.57□□□□□ -0.56
ZNF548-212ENST00000602086 IGHV1-69DA0A0B4J2H0 117 aa11.57□□□□□ -0.56
ZNF548-212ENST00000602086 MSGN1A6NI15 193 aa11.57□□□□□ -0.56
ZNF548-212ENST00000602086 TIMM23O14925 209 aa11.57□□□□□ -0.56
ZNF548-212ENST00000602086 NPFFO15130 113 aa11.57□□□□□ -0.56
ZNF548-212ENST00000602086 VENTXO95231 258 aa11.57□□□□□ -0.56
ZNF548-212ENST00000602086 TMEM50AO95807 157 aa11.57□□□□□ -0.56
ZNF548-212ENST00000602086 IGHV1-69P01742 117 aa11.57□□□□□ -0.56
ZNF548-212ENST00000602086 CRYGBP07316 175 aa11.57□□□□□ -0.56
ZNF548-212ENST00000602086 IFITM2Q01629 132 aa11.57□□□□□ -0.56
ZNF548-212ENST00000602086 LHFPL4Q7Z7J7 247 aa11.57□□□□□ -0.56
ZNF548-212ENST00000602086 THNSL2Q86YJ6 484 aa11.57□□□□□ -0.56
ZNF548-212ENST00000602086 VKORC1L1Q8N0U8 176 aa11.57□□□□□ -0.56
ZNF548-212ENST00000602086 OR5B3Q8NH48 314 aa11.57□□□□□ -0.56
ZNF548-212ENST00000602086 AJUBAQ96IF1 538 aa11.57□□□□□ -0.56
ZNF548-212ENST00000602086 MAGT1Q9H0U3 335 aa11.57□□□□□ -0.56
ZNF548-212ENST00000602086 RBKSQ9H477 322 aa11.57□□□□□ -0.56
ZNF548-212ENST00000602086 GSX1Q9H4S2 264 aaPredicted RBP11.57□□□□□ -0.56
ZNF548-212ENST00000602086 RNF223E7ERA6 249 aa11.56□□□□□ -0.56
ZNF548-212ENST00000602086 INS-IGF2F8WCM5 200 aa11.56□□□□□ -0.56
ZNF548-212ENST00000602086 RBMXL2O75526 392 aaKnown RBP11.56□□□□□ -0.56
ZNF548-212ENST00000602086 CR1P17927 2039 aa11.56□□□□□ -0.56
ZNF548-212ENST00000602086 MAS1LP35410 378 aa11.56□□□□□ -0.56
ZNF548-212ENST00000602086 DYNLT3P51808 116 aa11.56□□□□□ -0.56
ZNF548-212ENST00000602086 ATP5IP56385 69 aaPredicted RBP11.56□□□□□ -0.56
ZNF548-212ENST00000602086 STPG2Q8N412 459 aa11.56□□□□□ -0.56
ZNF548-212ENST00000602086 TMEM252Q8N6L7 170 aa11.56□□□□□ -0.56
ZNF548-212ENST00000602086 DTD1Q8TEA8 209 aa11.56□□□□□ -0.56
ZNF548-212ENST00000602086 Q96MF0 132 aa11.56□□□□□ -0.56
ZNF548-212ENST00000602086 TMUB1Q9BVT8 246 aa11.56□□□□□ -0.56
ZNF548-212ENST00000602086 QTRT1Q9BXR0 403 aaKnown RBP11.56□□□□□ -0.56
ZNF548-212ENST00000602086 C7orf69Q9H7B7 122 aa11.56□□□□□ -0.56
ZNF548-212ENST00000602086 NAV3Q8IVL0 2385 aa11.56□□□□□ -0.56
ZNF548-212ENST00000602086 TRAV3A0A0B4J244 114 aa11.55□□□□□ -0.56
ZNF548-212ENST00000602086 MOSP00540 346 aa11.55□□□□□ -0.56
ZNF548-212ENST00000602086 IFNA17P01571 189 aa11.55□□□□□ -0.56
ZNF548-212ENST00000602086 IGHV4-31P0DP07 118 aa11.55□□□□□ -0.56
ZNF548-212ENST00000602086 BRS3P32247 399 aa11.55□□□□□ -0.56
ZNF548-212ENST00000602086 SAA4P35542 130 aa11.55□□□□□ -0.56
ZNF548-212ENST00000602086 AP2S1P53680 142 aaPredicted RBP11.55□□□□□ -0.56
ZNF548-212ENST00000602086 RPL8P62917 257 aaKnown RBP11.55□□□□□ -0.56
ZNF548-212ENST00000602086 UBA52P62987 128 aaKnown RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms