RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 ADAD2Q8NCV1 583 aaKnown RBP10.76□□□□□ -0.69
VRK3-219ENST00000600137 SGMS2Q8NHU3 365 aa10.76□□□□□ -0.69
VRK3-219ENST00000600137 S100ZQ8WXG8 99 aa10.76□□□□□ -0.69
VRK3-219ENST00000600137 SEC22AQ96IW7 307 aa10.76□□□□□ -0.69
VRK3-219ENST00000600137 OR2A7Q96R45 310 aa10.76□□□□□ -0.69
VRK3-219ENST00000600137 CITED2Q99967 270 aaPredicted RBP10.76□□□□□ -0.69
VRK3-219ENST00000600137 PARP11Q9NR21 331 aa10.76□□□□□ -0.69
VRK3-219ENST00000600137 BET1LQ9NYM9 111 aa10.76□□□□□ -0.69
VRK3-219ENST00000600137 COMMD9Q9P000 198 aa10.76□□□□□ -0.69
VRK3-219ENST00000600137 C3orf85A0A1B0GTC6 90 aa10.75□□□□□ -0.69
VRK3-219ENST00000600137 CRYM-AS1A6NIL9 109 aa10.75□□□□□ -0.69
VRK3-219ENST00000600137 CGB1A6NKQ9 187 aa10.75□□□□□ -0.69
VRK3-219ENST00000600137 H0Y980 276 aa10.75□□□□□ -0.69
VRK3-219ENST00000600137 UPK2O00526 184 aa10.75□□□□□ -0.69
VRK3-219ENST00000600137 FBXO24O75426 580 aa10.75□□□□□ -0.69
VRK3-219ENST00000600137 IGHG4P01861 327 aa10.75□□□□□ -0.69
VRK3-219ENST00000600137 P0C879 139 aa10.75□□□□□ -0.69
VRK3-219ENST00000600137 MYOD1P15172 320 aa10.75□□□□□ -0.69
VRK3-219ENST00000600137 NQO2P16083 231 aa10.75□□□□□ -0.69
VRK3-219ENST00000600137 FAUP35544 74 aaKnown RBP10.75□□□□□ -0.69
VRK3-219ENST00000600137 CCR6P51684 374 aa10.75□□□□□ -0.69
VRK3-219ENST00000600137 SUPT4H1P63272 117 aaKnown RBP10.75□□□□□ -0.69
VRK3-219ENST00000600137 IFITM3Q01628 133 aa10.75□□□□□ -0.69
VRK3-219ENST00000600137 SP6Q3SY56 376 aa10.75□□□□□ -0.69
VRK3-219ENST00000600137 AKIRIN2Q53H80 203 aa10.75□□□□□ -0.69
VRK3-219ENST00000600137 C10orf55Q5SWW7 151 aa10.75□□□□□ -0.69
VRK3-219ENST00000600137 TRIQKQ629K1 86 aa10.75□□□□□ -0.69
VRK3-219ENST00000600137 POC5Q8NA72 575 aa10.75□□□□□ -0.69
VRK3-219ENST00000600137 LFNGQ8NES3 379 aa10.75□□□□□ -0.69
VRK3-219ENST00000600137 GLYATL2Q8WU03 294 aa10.75□□□□□ -0.69
VRK3-219ENST00000600137 R3HDM4Q96D70 268 aa10.75□□□□□ -0.69
VRK3-219ENST00000600137 CCDC32Q9BV29 185 aa10.75□□□□□ -0.69
VRK3-219ENST00000600137 TRAV41A0A0B4J266 112 aa10.74□□□□□ -0.69
VRK3-219ENST00000600137 RPA2P15927 270 aa10.74□□□□□ -0.69
VRK3-219ENST00000600137 UCP1P25874 307 aa10.74□□□□□ -0.69
VRK3-219ENST00000600137 PSMB8P28062 276 aa10.74□□□□□ -0.69
VRK3-219ENST00000600137 LCNL1Q6ZST4 164 aa10.74□□□□□ -0.69
VRK3-219ENST00000600137 MMD2Q8IY49 270 aa10.74□□□□□ -0.69
VRK3-219ENST00000600137 LHFPL5Q8TAF8 219 aa10.74□□□□□ -0.69
VRK3-219ENST00000600137 VSTM2AQ8TAG5 236 aa10.74□□□□□ -0.69
VRK3-219ENST00000600137 MYOZ3Q8TDC0 251 aa10.74□□□□□ -0.69
VRK3-219ENST00000600137 ARPC1AQ92747 370 aa10.74□□□□□ -0.69
VRK3-219ENST00000600137 SLC25A21Q9BQT8 299 aaPredicted RBP10.74□□□□□ -0.69
VRK3-219ENST00000600137 KLK15Q9H2R5 256 aa10.74□□□□□ -0.69
VRK3-219ENST00000600137 NAA60Q9H7X0 242 aa10.74□□□□□ -0.69
VRK3-219ENST00000600137 TMEM140Q9NV12 185 aa10.74□□□□□ -0.69
VRK3-219ENST00000600137 COPZ2Q9P299 210 aa10.74□□□□□ -0.69
VRK3-219ENST00000600137 TEX13DA0A0J9YY54 714 aaPredicted RBP10.73□□□□□ -0.69
VRK3-219ENST00000600137 LINC00854A0A1B0GVQ3 168 aa10.73□□□□□ -0.69
VRK3-219ENST00000600137 NAP1L6A6NFF2 107 aa10.73□□□□□ -0.69
VRK3-219ENST00000600137 MSGN1A6NI15 193 aa10.73□□□□□ -0.69
VRK3-219ENST00000600137 MARCH11A6NNE9 402 aa10.73□□□□□ -0.69
VRK3-219ENST00000600137 TEX22C9J3V5 150 aa10.73□□□□□ -0.69
VRK3-219ENST00000600137 CDS2O95674 445 aa10.73□□□□□ -0.69
VRK3-219ENST00000600137 KRASP01116 189 aa10.73□□□□□ -0.69
VRK3-219ENST00000600137 IGKV1-5P01602 117 aa10.73□□□□□ -0.69
VRK3-219ENST00000600137 OR9G9P0C7N8 305 aa10.73□□□□□ -0.69
VRK3-219ENST00000600137 S100GP29377 79 aa10.73□□□□□ -0.69
VRK3-219ENST00000600137 G6PCP35575 357 aa10.73□□□□□ -0.69
VRK3-219ENST00000600137 DHODHQ02127 395 aa10.73□□□□□ -0.69
VRK3-219ENST00000600137 TNXAQ16473 311 aa10.73□□□□□ -0.69
VRK3-219ENST00000600137 CCDC71LQ8N9Z2 235 aa10.73□□□□□ -0.69
VRK3-219ENST00000600137 OR4A5Q8NH83 315 aa10.73□□□□□ -0.69
VRK3-219ENST00000600137 SRSF12Q8WXF0 261 aaKnown RBP10.73□□□□□ -0.69
VRK3-219ENST00000600137 GALNT14Q96FL9 552 aa10.73□□□□□ -0.69
VRK3-219ENST00000600137 C7orf50Q9BRJ6 194 aaKnown RBP10.73□□□□□ -0.69
VRK3-219ENST00000600137 AIFM2Q9BRQ8 373 aa10.73□□□□□ -0.69
VRK3-219ENST00000600137 TMEM222Q9H0R3 208 aa10.73□□□□□ -0.69
VRK3-219ENST00000600137 C14orf166Q9Y224 244 aaKnown RBP10.73□□□□□ -0.69
VRK3-219ENST00000600137 MGAM2Q2M2H8 2515 aa10.72□□□□□ -0.69
VRK3-219ENST00000600137 DBX1A6NMT0 343 aa10.72□□□□□ -0.69
VRK3-219ENST00000600137 NDUFB6O95139 128 aa10.72□□□□□ -0.69
VRK3-219ENST00000600137 RPLP1P05386 114 aaKnown RBP10.72□□□□□ -0.69
VRK3-219ENST00000600137 ELANEP08246 267 aa10.72□□□□□ -0.69
VRK3-219ENST00000600137 FGF2P09038 288 aa10.72□□□□□ -0.69
VRK3-219ENST00000600137 OR5AC1P0C628 307 aa10.72□□□□□ -0.69
VRK3-219ENST00000600137 VDAC1P21796 283 aa10.72□□□□□ -0.69
VRK3-219ENST00000600137 MAS1LP35410 378 aa10.72□□□□□ -0.69
VRK3-219ENST00000600137 GNB1P62873 340 aa10.72□□□□□ -0.69
VRK3-219ENST00000600137 SLC35B1P78383 322 aa10.72□□□□□ -0.69
VRK3-219ENST00000600137 FOXE3Q13461 319 aa10.72□□□□□ -0.69
VRK3-219ENST00000600137 TMEM187Q14656 261 aa10.72□□□□□ -0.69
VRK3-219ENST00000600137 ZNF846Q147U1 533 aa10.72□□□□□ -0.69
VRK3-219ENST00000600137 ECSCRQ19T08 205 aa10.72□□□□□ -0.69
VRK3-219ENST00000600137 TEX38Q6PEX7 206 aa10.72□□□□□ -0.69
VRK3-219ENST00000600137 C18orf65Q6ZTR6 163 aa10.72□□□□□ -0.69
VRK3-219ENST00000600137 COMMD1Q8N668 190 aa10.72□□□□□ -0.69
VRK3-219ENST00000600137 GRPEL2Q8TAA5 225 aa10.72□□□□□ -0.69
VRK3-219ENST00000600137 SCGB3A2Q96PL1 93 aa10.72□□□□□ -0.69
VRK3-219ENST00000600137 GON7Q9BXV9 100 aa10.72□□□□□ -0.69
VRK3-219ENST00000600137 TBC1D24Q9ULP9 559 aa10.72□□□□□ -0.69
VRK3-219ENST00000600137 A0A0G2JRQ6 117 aa10.71□□□□□ -0.69
VRK3-219ENST00000600137 B3GALNT1O75752 331 aa10.71□□□□□ -0.69
VRK3-219ENST00000600137 CNIH1O95406 144 aa10.71□□□□□ -0.69
VRK3-219ENST00000600137 OR2B8PP59922 312 aa10.71□□□□□ -0.69
VRK3-219ENST00000600137 RPL8P62917 257 aaKnown RBP10.71□□□□□ -0.69
VRK3-219ENST00000600137 TMEM267Q0VDI3 215 aaPredicted RBP10.71□□□□□ -0.69
VRK3-219ENST00000600137 IZUMO4Q1ZYL8 232 aa10.71□□□□□ -0.69
VRK3-219ENST00000600137 UNQ5815/PRO19632Q6UWF5 114 aa10.71□□□□□ -0.69
VRK3-219ENST00000600137 NDUFA11Q86Y39 141 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms